RNA–Protein interactions for RNA: ENST00000476556.5

RERE-212, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 1 (best) BASIC

Gene RERE, Length 4,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-212ENST00000476556 NBR1Q14596 966 aa17.91■□□□□ 0.46
RERE-212ENST00000476556 CCDC136Q96JN2 1154 aa17.91■□□□□ 0.46
RERE-212ENST00000476556 TSHZ2Q9NRE2 1034 aa17.89■□□□□ 0.45
RERE-212ENST00000476556 SLC4A1APQ9BWU0 796 aaKnown RBP17.88■□□□□ 0.45
RERE-212ENST00000476556 SALL2Q9Y467 1007 aaPredicted RBP17.87■□□□□ 0.45
RERE-212ENST00000476556 FBLN2P98095 1184 aa17.86■□□□□ 0.45
RERE-212ENST00000476556 TMC1Q8TDI8 760 aa17.84■□□□□ 0.45
RERE-212ENST00000476556 RAPGEF2Q9Y4G8 1499 aa17.84■□□□□ 0.45
RERE-212ENST00000476556 DHX57Q6P158 1386 aaKnown RBP17.84■□□□□ 0.45
RERE-212ENST00000476556 RAB3GAP2Q9H2M9 1393 aa17.83■□□□□ 0.44
RERE-212ENST00000476556 RBM19Q9Y4C8 960 aaKnown RBP17.82■□□□□ 0.44
RERE-212ENST00000476556 SETD5Q9C0A6 1442 aa17.81■□□□□ 0.44
RERE-212ENST00000476556 KCNH8Q96L42 1107 aa17.81■□□□□ 0.44
RERE-212ENST00000476556 ZBTB47Q9UFB7 747 aaPredicted RBP17.81■□□□□ 0.44
RERE-212ENST00000476556 CCER2I3L3R5 266 aa17.79■□□□□ 0.44
RERE-212ENST00000476556 SENP3-EIF4A1A0A087X0R7 540 aa17.79■□□□□ 0.44
RERE-212ENST00000476556 TIMELESSQ9UNS1 1208 aa17.79■□□□□ 0.44
RERE-212ENST00000476556 PPP4R2Q9NY27 417 aa17.74■□□□□ 0.43
RERE-212ENST00000476556 CARMIL1Q5VZK9 1371 aa17.73■□□□□ 0.43
RERE-212ENST00000476556 FHAD1B1AJZ9 1412 aa17.73■□□□□ 0.43
RERE-212ENST00000476556 CUX2O14529 1486 aa17.73■□□□□ 0.43
RERE-212ENST00000476556 SMARCA4P51532 1647 aa17.72■□□□□ 0.43
RERE-212ENST00000476556 KDM2AQ9Y2K7 1162 aa17.71■□□□□ 0.43
RERE-212ENST00000476556 B4GALNT3Q6L9W6 998 aa17.7■□□□□ 0.42
RERE-212ENST00000476556 CANXP27824 592 aaKnown RBP17.69■□□□□ 0.42
RERE-212ENST00000476556 SMARCA2P51531 1590 aa17.68■□□□□ 0.42
RERE-212ENST00000476556 BCL11AQ9H165 835 aa17.68■□□□□ 0.42
RERE-212ENST00000476556 PPP1R15AO75807 674 aaPredicted RBP17.68■□□□□ 0.42
RERE-212ENST00000476556 HSPA5P11021 654 aaKnown RBP17.62■□□□□ 0.41
RERE-212ENST00000476556 ARHGAP35Q9NRY4 1499 aa17.61■□□□□ 0.41
RERE-212ENST00000476556 NOP58Q9Y2X3 529 aaKnown RBP17.57■□□□□ 0.4
RERE-212ENST00000476556 TSPY4P0CV99 314 aa17.57■□□□□ 0.4
RERE-212ENST00000476556 TSPY10P0CW01 314 aa17.57■□□□□ 0.4
RERE-212ENST00000476556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.55■□□□□ 0.43e-7■■□□□ 11.4
RERE-212ENST00000476556 ATAD2BQ9ULI0 1458 aa17.54■□□□□ 0.4
RERE-212ENST00000476556 KIF21BO75037 1637 aa17.54■□□□□ 0.4
RERE-212ENST00000476556 EIF5BO60841 1220 aaKnown RBP17.54■□□□□ 0.4
RERE-212ENST00000476556 FOXD1Q16676 465 aa17.52■□□□□ 0.4
RERE-212ENST00000476556 CARD11Q9BXL7 1154 aa17.51■□□□□ 0.39
RERE-212ENST00000476556 WDR43Q15061 677 aaKnown RBP eCLIP17.5■□□□□ 0.39
RERE-212ENST00000476556 CFDP1Q9UEE9 299 aaPredicted RBP17.48■□□□□ 0.39
RERE-212ENST00000476556 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.48■□□□□ 0.39
RERE-212ENST00000476556 ERICH6BQ5W0A0 696 aa17.47■□□□□ 0.39
RERE-212ENST00000476556 DEKP35659 375 aaKnown RBP17.47■□□□□ 0.39
RERE-212ENST00000476556 FHOD3Q2V2M9 1422 aa17.46■□□□□ 0.39
RERE-212ENST00000476556 RGL3Q3MIN7 710 aa17.46■□□□□ 0.39
RERE-212ENST00000476556 LAS1LQ9Y4W2 734 aaKnown RBP17.45■□□□□ 0.38
RERE-212ENST00000476556 MPHOSPH9Q99550 1183 aa17.42■□□□□ 0.38
RERE-212ENST00000476556 L3MBTL2Q969R5 705 aa17.41■□□□□ 0.38
RERE-212ENST00000476556 UPF2Q9HAU5 1272 aaKnown RBP17.41■□□□□ 0.38
RERE-212ENST00000476556 FMN1Q68DA7 1419 aa17.4■□□□□ 0.38
RERE-212ENST00000476556 DDRGK1Q96HY6 314 aa17.4■□□□□ 0.38
RERE-212ENST00000476556 SYNJ1O43426 1573 aa17.4■□□□□ 0.38
RERE-212ENST00000476556 CHMP7Q8WUX9 453 aaPredicted RBP17.4■□□□□ 0.38
RERE-212ENST00000476556 NEFMP07197 916 aa17.39■□□□□ 0.37
RERE-212ENST00000476556 ARAP1Q96P48 1450 aa17.37■□□□□ 0.37
RERE-212ENST00000476556 PLEKHD1A6NEE1 506 aa17.37■□□□□ 0.37
RERE-212ENST00000476556 EIF4G1Q04637 1599 aaKnown RBP17.37■□□□□ 0.37
RERE-212ENST00000476556 ARXQ96QS3 562 aa17.37■□□□□ 0.37
RERE-212ENST00000476556 RTN4Q9NQC3 1192 aaKnown RBP17.36■□□□□ 0.37
RERE-212ENST00000476556 PPM1GO15355 546 aaPredicted RBP17.35■□□□□ 0.37
RERE-212ENST00000476556 RRBP1Q9P2E9 1410 aaKnown RBP17.35■□□□□ 0.37
RERE-212ENST00000476556 CHGAP10645 457 aaKnown RBP17.35■□□□□ 0.37
RERE-212ENST00000476556 PHLDB1Q86UU1 1377 aa17.35■□□□□ 0.37
RERE-212ENST00000476556 CC2D1BQ5T0F9 858 aaKnown RBP17.32■□□□□ 0.36
RERE-212ENST00000476556 DCAF11Q8TEB1 546 aa17.32■□□□□ 0.36
RERE-212ENST00000476556 TDRD9Q8NDG6 1382 aaKnown RBP17.32■□□□□ 0.36
RERE-212ENST00000476556 IGF1RP08069 1367 aa17.31■□□□□ 0.36
RERE-212ENST00000476556 PRKRIP1Q9H875 184 aaPredicted RBP17.3■□□□□ 0.36
RERE-212ENST00000476556 CCDC18Q5T9S5 1454 aa17.3■□□□□ 0.36
RERE-212ENST00000476556 NUDCQ9Y266 331 aa17.3■□□□□ 0.36
RERE-212ENST00000476556 PKD2Q13563 968 aa17.3■□□□□ 0.36
RERE-212ENST00000476556 KNSTRNQ9Y448 316 aa17.28■□□□□ 0.36
RERE-212ENST00000476556 CADPSQ9ULU8 1353 aa17.28■□□□□ 0.36
RERE-212ENST00000476556 RGS3P49796 1198 aa17.28■□□□□ 0.36
RERE-212ENST00000476556 HSP90AA1P07900 732 aaKnown RBP17.27■□□□□ 0.36
RERE-212ENST00000476556 FANCIQ9NVI1 1328 aa17.27■□□□□ 0.36
RERE-212ENST00000476556 LRRC9Q6ZRR7 1453 aa17.26■□□□□ 0.35
RERE-212ENST00000476556 ERICH3Q5RHP9 1530 aa17.25■□□□□ 0.35
RERE-212ENST00000476556 RCAN3Q9UKA8 241 aa17.24■□□□□ 0.35
RERE-212ENST00000476556 IPO9Q96P70 1041 aaKnown RBP17.24■□□□□ 0.35
RERE-212ENST00000476556 PRXQ9BXM0 1461 aa17.23■□□□□ 0.35
RERE-212ENST00000476556 ZBED9Q6R2W3 1325 aa17.23■□□□□ 0.35
RERE-212ENST00000476556 BECN1Q14457 450 aa17.21■□□□□ 0.35
RERE-212ENST00000476556 FGD6Q6ZV73 1430 aa17.19■□□□□ 0.34
RERE-212ENST00000476556 TCERG1O14776 1098 aaKnown RBP17.18■□□□□ 0.34
RERE-212ENST00000476556 UACAQ9BZF9 1416 aa17.17■□□□□ 0.34
RERE-212ENST00000476556 CDCA8Q53HL2 280 aa17.17■□□□□ 0.34
RERE-212ENST00000476556 WASHC2AQ641Q2 1341 aa17.17■□□□□ 0.34
RERE-212ENST00000476556 KTN1Q86UP2 1357 aaKnown RBP17.16■□□□□ 0.34
RERE-212ENST00000476556 RALBP1Q15311 655 aa17.16■□□□□ 0.34
RERE-212ENST00000476556 NEUROD2Q15784 382 aa17.16■□□□□ 0.34
RERE-212ENST00000476556 TMF1P82094 1093 aa17.15■□□□□ 0.34
RERE-212ENST00000476556 ANP32BQ92688 251 aaKnown RBP17.15■□□□□ 0.34
RERE-212ENST00000476556 FGD5Q6ZNL6 1462 aa17.15■□□□□ 0.34
RERE-212ENST00000476556 WDR97A6NE52 1622 aa17.15■□□□□ 0.34
RERE-212ENST00000476556 NUP155O75694 1391 aa17.14■□□□□ 0.33
RERE-212ENST00000476556 TOP2BQ02880 1626 aa17.12■□□□□ 0.33
RERE-212ENST00000476556 FRAT1Q92837 279 aaPredicted RBP17.12■□□□□ 0.33
RERE-212ENST00000476556 ROCK2O75116 1388 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms