RNA–Protein interactions for RNA: ENST00000474906.2

SENP6-206, Transcript of SUMO specific peptidase 6, humanhuman

TSL 3

Gene SENP6, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-206ENST00000474906 ZBTB47Q9UFB7 747 aaPredicted RBP18.25■□□□□ 0.51
SENP6-206ENST00000474906 MS4A3Q96HJ5 214 aa18.2■□□□□ 0.5
SENP6-206ENST00000474906 NUBP1P53384 320 aa18.15■□□□□ 0.5
SENP6-206ENST00000474906 LHX8Q68G74 356 aa18.14■□□□□ 0.49
SENP6-206ENST00000474906 KIF12Q96FN5 646 aa18.12■□□□□ 0.49
SENP6-206ENST00000474906 VASPP50552 380 aaPredicted RBP18.07■□□□□ 0.48
SENP6-206ENST00000474906 MAP3K13O43283 966 aa18.02■□□□□ 0.48
SENP6-206ENST00000474906 FAM212AQ96EL1 285 aa18.01■□□□□ 0.47
SENP6-206ENST00000474906 ASTLQ6HA08 431 aaPredicted RBP18■□□□□ 0.47
SENP6-206ENST00000474906 PELP1Q8IZL8 1130 aaKnown RBP17.98■□□□□ 0.47
SENP6-206ENST00000474906 ATMINO43313 823 aaPredicted RBP17.97■□□□□ 0.47
SENP6-206ENST00000474906 TRPC6Q9Y210 931 aa17.92■□□□□ 0.46
SENP6-206ENST00000474906 KLHL34Q8N239 644 aa17.9■□□□□ 0.46
SENP6-206ENST00000474906 SGIP1Q9BQI5 828 aa17.89■□□□□ 0.45
SENP6-206ENST00000474906 BMP2KQ9NSY1 1161 aaPredicted RBP17.88■□□□□ 0.45
SENP6-206ENST00000474906 PCDHB13Q9Y5F0 798 aa17.87■□□□□ 0.45
SENP6-206ENST00000474906 ATN1P54259 1190 aaPredicted RBP17.86■□□□□ 0.45
SENP6-206ENST00000474906 DCAF8Q5TAQ9 597 aa17.86■□□□□ 0.45
SENP6-206ENST00000474906 TIE1P35590 1138 aa17.84■□□□□ 0.45
SENP6-206ENST00000474906 SLC39A7Q92504 469 aa17.83■□□□□ 0.44
SENP6-206ENST00000474906 METRNQ9UJH8 293 aa17.83■□□□□ 0.44
SENP6-206ENST00000474906 POTEB2H3BUK9 544 aa17.8■□□□□ 0.44
SENP6-206ENST00000474906 C7P10643 843 aa17.8■□□□□ 0.44
SENP6-206ENST00000474906 IFNL1Q8IU54 200 aa17.8■□□□□ 0.44
SENP6-206ENST00000474906 TTLL13PA6NNM8 815 aa17.76■□□□□ 0.43
SENP6-206ENST00000474906 PYGBP11216 843 aa17.76■□□□□ 0.43
SENP6-206ENST00000474906 IFNLR1Q8IU57 520 aaPredicted RBP17.76■□□□□ 0.43
SENP6-206ENST00000474906 GSE1Q14687 1217 aa17.72■□□□□ 0.43
SENP6-206ENST00000474906 SPOCK2Q92563 424 aa17.67■□□□□ 0.42
SENP6-206ENST00000474906 OTUD5Q96G74 571 aa17.67■□□□□ 0.42
SENP6-206ENST00000474906 TRIM35Q9UPQ4 493 aa17.64■□□□□ 0.41
SENP6-206ENST00000474906 TMEM106CQ9BVX2 250 aa17.62■□□□□ 0.41
SENP6-206ENST00000474906 POTEFA5A3E0 1075 aa17.61■□□□□ 0.41
SENP6-206ENST00000474906 PCDHB8Q9UN66 801 aa17.6■□□□□ 0.41
SENP6-206ENST00000474906 POTEJP0CG39 1038 aa17.59■□□□□ 0.41
SENP6-206ENST00000474906 IER5LQ5T953 404 aa17.56■□□□□ 0.4
SENP6-206ENST00000474906 CHRM1P11229 460 aaPredicted RBP17.55■□□□□ 0.4
SENP6-206ENST00000474906 COLQQ9Y215 455 aaPredicted RBP17.53■□□□□ 0.4
SENP6-206ENST00000474906 CIZ1Q9ULV3 898 aaPredicted RBP17.52■□□□□ 0.4
SENP6-206ENST00000474906 SEC24BO95487 1268 aa17.51■□□□□ 0.39
SENP6-206ENST00000474906 ZNF467Q7Z7K2 595 aaPredicted RBP17.51■□□□□ 0.39
SENP6-206ENST00000474906 MAMSTRQ6ZN01 415 aa17.48■□□□□ 0.39
SENP6-206ENST00000474906 SCUBE2Q9NQ36 999 aa17.41■□□□□ 0.38
SENP6-206ENST00000474906 IRX5P78411 483 aaPredicted RBP17.38■□□□□ 0.37
SENP6-206ENST00000474906 PLCG2P16885 1265 aa17.36■□□□□ 0.37
SENP6-206ENST00000474906 PSEN1P49768 467 aa17.35■□□□□ 0.37
SENP6-206ENST00000474906 PDAP1Q13442 181 aaKnown RBP17.3■□□□□ 0.36
SENP6-206ENST00000474906 TRIM41Q8WV44 630 aa17.3■□□□□ 0.36
SENP6-206ENST00000474906 OCEL1Q9H607 264 aa17.29■□□□□ 0.36
SENP6-206ENST00000474906 GOLGA2Q08379 1002 aa17.26■□□□□ 0.35
SENP6-206ENST00000474906 MKRN3Q13064 507 aaKnown RBP17.23■□□□□ 0.35
SENP6-206ENST00000474906 PDCD7Q8N8D1 485 aaKnown RBP17.18■□□□□ 0.34
SENP6-206ENST00000474906 CABP2Q9NPB3 220 aa17.15■□□□□ 0.34
SENP6-206ENST00000474906 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.13■□□□□ 0.332e-7■■■■□ 24
SENP6-206ENST00000474906 SLAIN1Q8ND83 568 aa17.11■□□□□ 0.33
SENP6-206ENST00000474906 RNF25Q96BH1 459 aaPredicted RBP17.11■□□□□ 0.33
SENP6-206ENST00000474906 POTEMA6NI47 508 aa17.08■□□□□ 0.32
SENP6-206ENST00000474906 LCE2DQ5TA82 110 aaPredicted RBP17.08■□□□□ 0.32
SENP6-206ENST00000474906 ILDR1Q86SU0 546 aaPredicted RBP17.08■□□□□ 0.32
SENP6-206ENST00000474906 RIOK3O14730 519 aaKnown RBP17.07■□□□□ 0.32
SENP6-206ENST00000474906 FAM163AQ96GL9 167 aaPredicted RBP17.05■□□□□ 0.32
SENP6-206ENST00000474906 POTEGQ6S5H5 508 aa17.04■□□□□ 0.32
SENP6-206ENST00000474906 L3MBTL3Q96JM7 780 aaPredicted RBP17.01■□□□□ 0.31
SENP6-206ENST00000474906 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.01■□□□□ 0.31
SENP6-206ENST00000474906 VGFO15240 615 aaPredicted RBP16.98■□□□□ 0.31
SENP6-206ENST00000474906 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.97■□□□□ 0.31
SENP6-206ENST00000474906 DPY19L2Q6NUT2 758 aa16.97■□□□□ 0.31
SENP6-206ENST00000474906 EFCAB3Q8N7B9 438 aa16.97■□□□□ 0.31
SENP6-206ENST00000474906 ZFP91Q96JP5 570 aaPredicted RBP16.97■□□□□ 0.31
SENP6-206ENST00000474906 C3orf67Q6ZVT6 689 aa16.96■□□□□ 0.31
SENP6-206ENST00000474906 ECM2O94769 699 aaPredicted RBP16.89■□□□□ 0.29
SENP6-206ENST00000474906 PKD2Q13563 968 aa16.87■□□□□ 0.29
SENP6-206ENST00000474906 BOLA1Q9Y3E2 137 aa16.86■□□□□ 0.29
SENP6-206ENST00000474906 ST18O60284 1047 aa16.84■□□□□ 0.29
SENP6-206ENST00000474906 G3V3G9 751 aa16.83■□□□□ 0.28
SENP6-206ENST00000474906 TAOK2Q9UL54 1235 aa16.83■□□□□ 0.28
SENP6-206ENST00000474906 SOX12O15370 315 aa16.82■□□□□ 0.28
SENP6-206ENST00000474906 SNPHO15079 494 aa16.8■□□□□ 0.28
SENP6-206ENST00000474906 BCL11BQ9C0K0 894 aaPredicted RBP16.8■□□□□ 0.28
SENP6-206ENST00000474906 RGL2O15211 777 aa16.77■□□□□ 0.28
SENP6-206ENST00000474906 TMEM121BQ9BXQ6 578 aaPredicted RBP16.76■□□□□ 0.27
SENP6-206ENST00000474906 PCDH10Q9P2E7 1040 aa16.76■□□□□ 0.27
SENP6-206ENST00000474906 PHF8Q9UPP1 1060 aa16.76■□□□□ 0.27
SENP6-206ENST00000474906 MS4A4AQ96JQ5 239 aa16.75■□□□□ 0.27
SENP6-206ENST00000474906 STK24Q9Y6E0 443 aa16.74■□□□□ 0.27
SENP6-206ENST00000474906 PLSCR2Q9NRY7 297 aa16.72■□□□□ 0.27
SENP6-206ENST00000474906 STK25O00506 426 aa16.71■□□□□ 0.27
SENP6-206ENST00000474906 MICALL2Q8IY33 904 aa16.69■□□□□ 0.26
SENP6-206ENST00000474906 NLRP6P59044 892 aa16.65■□□□□ 0.26
SENP6-206ENST00000474906 FBXO22Q8NEZ5 403 aa16.64■□□□□ 0.25
SENP6-206ENST00000474906 MFRPQ9BY79 579 aa16.62■□□□□ 0.25
SENP6-206ENST00000474906 CDAN1Q8IWY9 1227 aa16.59■□□□□ 0.25
SENP6-206ENST00000474906 MARVELD3Q96A59 401 aa16.59■□□□□ 0.25
SENP6-206ENST00000474906 TMEM92Q6UXU6 159 aa16.57■□□□□ 0.24
SENP6-206ENST00000474906 HOXB3P14651 431 aaPredicted RBP16.56■□□□□ 0.24
SENP6-206ENST00000474906 EMP3P54852 163 aa16.49■□□□□ 0.23
SENP6-206ENST00000474906 DOK7Q18PE1 504 aa16.48■□□□□ 0.23
SENP6-206ENST00000474906 ZNF710Q8N1W2 664 aa16.44■□□□□ 0.22
SENP6-206ENST00000474906 HS6ST3Q8IZP7 471 aa16.42■□□□□ 0.22
SENP6-206ENST00000474906 HOXB1P14653 301 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms