RNA–Protein interactions for RNA: ENST00000474148.5

ATG16L1-214, Transcript of autophagy related 16 like 1, humanhuman

TSL 2

Gene ATG16L1, Length 4,208 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG16L1-214ENST00000474148 NBR1Q14596 966 aa12.69□□□□□ -0.38
ATG16L1-214ENST00000474148 FOXD1Q16676 465 aa12.69□□□□□ -0.38
ATG16L1-214ENST00000474148 NACADO15069 1562 aa12.69□□□□□ -0.38
ATG16L1-214ENST00000474148 EEA1Q15075 1411 aa12.68□□□□□ -0.38
ATG16L1-214ENST00000474148 RGL3Q3MIN7 710 aa12.65□□□□□ -0.38
ATG16L1-214ENST00000474148 TMC1Q8TDI8 760 aa12.64□□□□□ -0.39
ATG16L1-214ENST00000474148 CCNB3Q8WWL7 1395 aa12.63□□□□□ -0.39
ATG16L1-214ENST00000474148 KIF27Q86VH2 1401 aa12.62□□□□□ -0.39
ATG16L1-214ENST00000474148 CHGAP10645 457 aaKnown RBP12.61□□□□□ -0.39
ATG16L1-214ENST00000474148 EIF4G2P78344 907 aaKnown RBP eCLIP12.61□□□□□ -0.392e-6■■■■■ 26.9
ATG16L1-214ENST00000474148 CCDC136Q96JN2 1154 aa12.61□□□□□ -0.39
ATG16L1-214ENST00000474148 VPS8Q8N3P4 1428 aa12.6□□□□□ -0.39
ATG16L1-214ENST00000474148 RAPGEF2Q9Y4G8 1499 aa12.59□□□□□ -0.39
ATG16L1-214ENST00000474148 B4GALNT3Q6L9W6 998 aa12.56□□□□□ -0.4
ATG16L1-214ENST00000474148 CUX2O14529 1486 aa12.56□□□□□ -0.4
ATG16L1-214ENST00000474148 CANXP27824 592 aaKnown RBP12.55□□□□□ -0.4
ATG16L1-214ENST00000474148 CHMP7Q8WUX9 453 aaPredicted RBP12.55□□□□□ -0.4
ATG16L1-214ENST00000474148 ANP32AP39687 249 aaKnown RBP12.54□□□□□ -0.4
ATG16L1-214ENST00000474148 RAB3GAP2Q9H2M9 1393 aa12.54□□□□□ -0.4
ATG16L1-214ENST00000474148 CARMIL1Q5VZK9 1371 aa12.54□□□□□ -0.4
ATG16L1-214ENST00000474148 TSPY4P0CV99 314 aa12.52□□□□□ -0.41
ATG16L1-214ENST00000474148 TSPY10P0CW01 314 aa12.52□□□□□ -0.41
ATG16L1-214ENST00000474148 PLPPR3Q6T4P5 718 aa12.5□□□□□ -0.41
ATG16L1-214ENST00000474148 ARXQ96QS3 562 aa12.5□□□□□ -0.41
ATG16L1-214ENST00000474148 TDRD9Q8NDG6 1382 aaKnown RBP12.49□□□□□ -0.41
ATG16L1-214ENST00000474148 CFDP1Q9UEE9 299 aaPredicted RBP12.48□□□□□ -0.41
ATG16L1-214ENST00000474148 SLC24A1O60721 1099 aa12.47□□□□□ -0.41
ATG16L1-214ENST00000474148 HSPA5P11021 654 aaKnown RBP12.47□□□□□ -0.41
ATG16L1-214ENST00000474148 DHX57Q6P158 1386 aaKnown RBP12.46□□□□□ -0.42
ATG16L1-214ENST00000474148 TSHZ2Q9NRE2 1034 aa12.45□□□□□ -0.42
ATG16L1-214ENST00000474148 ANP32EQ9BTT0 268 aa12.44□□□□□ -0.42
ATG16L1-214ENST00000474148 CARD11Q9BXL7 1154 aa12.44□□□□□ -0.42
ATG16L1-214ENST00000474148 SETD5Q9C0A6 1442 aa12.43□□□□□ -0.42
ATG16L1-214ENST00000474148 RBM19Q9Y4C8 960 aaKnown RBP12.43□□□□□ -0.42
ATG16L1-214ENST00000474148 PPP1R15AO75807 674 aaPredicted RBP12.42□□□□□ -0.42
ATG16L1-214ENST00000474148 TOP2AP11388 1531 aaKnown RBP12.42□□□□□ -0.42
ATG16L1-214ENST00000474148 FHOD3Q2V2M9 1422 aa12.42□□□□□ -0.42
ATG16L1-214ENST00000474148 CC2D1BQ5T0F9 858 aaKnown RBP12.41□□□□□ -0.42
ATG16L1-214ENST00000474148 ZBTB47Q9UFB7 747 aaPredicted RBP12.41□□□□□ -0.42
ATG16L1-214ENST00000474148 NEUROD2Q15784 382 aa12.4□□□□□ -0.42
ATG16L1-214ENST00000474148 PLEKHD1A6NEE1 506 aa12.4□□□□□ -0.42
ATG16L1-214ENST00000474148 DCAF11Q8TEB1 546 aa12.39□□□□□ -0.43
ATG16L1-214ENST00000474148 TNNT2P45379 298 aaPredicted RBP12.39□□□□□ -0.43
ATG16L1-214ENST00000474148 EIF4G1Q04637 1599 aaKnown RBP12.38□□□□□ -0.43
ATG16L1-214ENST00000474148 L3MBTL2Q969R5 705 aa12.37□□□□□ -0.43
ATG16L1-214ENST00000474148 WDR43Q15061 677 aaKnown RBP eCLIP12.36□□□□□ -0.43
ATG16L1-214ENST00000474148 LAS1LQ9Y4W2 734 aaKnown RBP12.36□□□□□ -0.43
ATG16L1-214ENST00000474148 ATAD2BQ9ULI0 1458 aa12.35□□□□□ -0.43
ATG16L1-214ENST00000474148 EIF5BO60841 1220 aaKnown RBP12.35□□□□□ -0.43
ATG16L1-214ENST00000474148 PLEKHG5O94827 1062 aa12.34□□□□□ -0.43
ATG16L1-214ENST00000474148 MPHOSPH9Q99550 1183 aa12.34□□□□□ -0.43
ATG16L1-214ENST00000474148 PKD2Q13563 968 aa12.34□□□□□ -0.43
ATG16L1-214ENST00000474148 RTN4Q9NQC3 1192 aaKnown RBP12.34□□□□□ -0.43
ATG16L1-214ENST00000474148 SMARCA4P51532 1647 aa12.33□□□□□ -0.44
ATG16L1-214ENST00000474148 FHAD1B1AJZ9 1412 aa12.32□□□□□ -0.44
ATG16L1-214ENST00000474148 RGS3P49796 1198 aa12.31□□□□□ -0.44
ATG16L1-214ENST00000474148 PPP4R2Q9NY27 417 aa12.31□□□□□ -0.44
ATG16L1-214ENST00000474148 SMARCA2P51531 1590 aa12.31□□□□□ -0.44
ATG16L1-214ENST00000474148 ARHGAP35Q9NRY4 1499 aa12.3□□□□□ -0.44
ATG16L1-214ENST00000474148 STAG3Q9UJ98 1225 aa12.29□□□□□ -0.44
ATG16L1-214ENST00000474148 CCER2I3L3R5 266 aa12.27□□□□□ -0.45
ATG16L1-214ENST00000474148 PPM1GO15355 546 aaPredicted RBP12.26□□□□□ -0.45
ATG16L1-214ENST00000474148 ZNF644Q9H582 1327 aaPredicted RBP12.25□□□□□ -0.45
ATG16L1-214ENST00000474148 PHLDB1Q86UU1 1377 aa12.25□□□□□ -0.45
ATG16L1-214ENST00000474148 SAFB2Q14151 953 aaKnown RBP eCLIP12.25□□□□□ -0.45
ATG16L1-214ENST00000474148 FRAT1Q92837 279 aaPredicted RBP12.24□□□□□ -0.45
ATG16L1-214ENST00000474148 KNSTRNQ9Y448 316 aa12.24□□□□□ -0.45
ATG16L1-214ENST00000474148 IGF1RP08069 1367 aa12.23□□□□□ -0.45
ATG16L1-214ENST00000474148 NEFMP07197 916 aa12.23□□□□□ -0.45
ATG16L1-214ENST00000474148 HNRNPMP52272 730 aaKnown RBP eCLIP12.23□□□□□ -0.45
ATG16L1-214ENST00000474148 CADPSQ9ULU8 1353 aa12.22□□□□□ -0.45
ATG16L1-214ENST00000474148 ARAP1Q96P48 1450 aa12.22□□□□□ -0.45
ATG16L1-214ENST00000474148 KIF21BO75037 1637 aa12.22□□□□□ -0.45
ATG16L1-214ENST00000474148 TIMELESSQ9UNS1 1208 aa12.21□□□□□ -0.45
ATG16L1-214ENST00000474148 HSP90AA1P07900 732 aaKnown RBP12.2□□□□□ -0.46
ATG16L1-214ENST00000474148 RAD54L2Q9Y4B4 1467 aa12.2□□□□□ -0.46
ATG16L1-214ENST00000474148 NPM1P06748 294 aaKnown RBP eCLIP12.19□□□□□ -0.46
ATG16L1-214ENST00000474148 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.19□□□□□ -0.46
ATG16L1-214ENST00000474148 NOP58Q9Y2X3 529 aaKnown RBP12.19□□□□□ -0.46
ATG16L1-214ENST00000474148 NUP155O75694 1391 aa12.19□□□□□ -0.46
ATG16L1-214ENST00000474148 SYNJ1O43426 1573 aa12.18□□□□□ -0.46
ATG16L1-214ENST00000474148 PLIN1O60240 522 aa12.18□□□□□ -0.46
ATG16L1-214ENST00000474148 ST20-MTHFSA0A0A6YYL1 179 aa12.18□□□□□ -0.46
ATG16L1-214ENST00000474148 CCDC184Q52MB2 194 aa12.18□□□□□ -0.46
ATG16L1-214ENST00000474148 PRKRIP1Q9H875 184 aaPredicted RBP12.16□□□□□ -0.46
ATG16L1-214ENST00000474148 NUTM2DQ5VT03 806 aaPredicted RBP12.16□□□□□ -0.46
ATG16L1-214ENST00000474148 SPRYD3Q8NCJ5 442 aa12.14□□□□□ -0.47
ATG16L1-214ENST00000474148 UPF2Q9HAU5 1272 aaKnown RBP12.14□□□□□ -0.47
ATG16L1-214ENST00000474148 DEKP35659 375 aaKnown RBP12.14□□□□□ -0.47
ATG16L1-214ENST00000474148 CCDC146Q8IYE0 955 aa12.13□□□□□ -0.47
ATG16L1-214ENST00000474148 DNAJC5BQ9UF47 199 aa12.13□□□□□ -0.47
ATG16L1-214ENST00000474148 FMN1Q68DA7 1419 aa12.13□□□□□ -0.47
ATG16L1-214ENST00000474148 ESF1Q9H501 851 aaKnown RBP12.12□□□□□ -0.47
ATG16L1-214ENST00000474148 ERCC6Q03468 1493 aa12.12□□□□□ -0.47
ATG16L1-214ENST00000474148 U2SURPO15042 1029 aaKnown RBP12.11□□□□□ -0.47
ATG16L1-214ENST00000474148 TPRNQ4KMQ1 711 aa12.11□□□□□ -0.47
ATG16L1-214ENST00000474148 GGT6Q6P531 493 aa12.11□□□□□ -0.47
ATG16L1-214ENST00000474148 RCAN3Q9UKA8 241 aa12.11□□□□□ -0.47
ATG16L1-214ENST00000474148 WASHC2AQ641Q2 1341 aa12.11□□□□□ -0.47
ATG16L1-214ENST00000474148 SOX12O15370 315 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms