RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 C19orf67A6NJJ6 358 aa9.23□□□□□ -0.93
LRCH3-214ENST00000473177 CREBZFQ9NS37 354 aa9.23□□□□□ -0.93
LRCH3-214ENST00000473177 CHADLQ6NUI6 762 aa9.22□□□□□ -0.93
LRCH3-214ENST00000473177 MYO15BQ96JP2 1530 aa9.21□□□□□ -0.93
LRCH3-214ENST00000473177 EIF4G1Q04637 1599 aaKnown RBP9.2□□□□□ -0.94
LRCH3-214ENST00000473177 PKD2Q13563 968 aa9.19□□□□□ -0.94
LRCH3-214ENST00000473177 MNX1P50219 401 aaPredicted RBP9.18□□□□□ -0.94
LRCH3-214ENST00000473177 NUBP1P53384 320 aa9.12□□□□□ -0.95
LRCH3-214ENST00000473177 CUX2O14529 1486 aa9.11□□□□□ -0.95
LRCH3-214ENST00000473177 GABBR2O75899 941 aa9.1□□□□□ -0.95
LRCH3-214ENST00000473177 FARP1Q9Y4F1 1045 aaPredicted RBP9.1□□□□□ -0.95
LRCH3-214ENST00000473177 ECM2O94769 699 aaPredicted RBP9.08□□□□□ -0.96
LRCH3-214ENST00000473177 NPM1P06748 294 aaKnown RBP eCLIP9.08□□□□□ -0.96
LRCH3-214ENST00000473177 CD44P16070 742 aaKnown RBP9.08□□□□□ -0.96
LRCH3-214ENST00000473177 CIZ1Q9ULV3 898 aaPredicted RBP9.08□□□□□ -0.96
LRCH3-214ENST00000473177 SCRIBQ14160 1630 aa9.07□□□□□ -0.96
LRCH3-214ENST00000473177 GSE1Q14687 1217 aa9.07□□□□□ -0.96
LRCH3-214ENST00000473177 TRIM41Q8WV44 630 aa9.06□□□□□ -0.96
LRCH3-214ENST00000473177 ERCC6Q03468 1493 aa9.05□□□□□ -0.96
LRCH3-214ENST00000473177 FAM212AQ96EL1 285 aa9.04□□□□□ -0.96
LRCH3-214ENST00000473177 CLCN6P51797 869 aa9.03□□□□□ -0.96
LRCH3-214ENST00000473177 RASEFQ8IZ41 740 aa9.03□□□□□ -0.96
LRCH3-214ENST00000473177 DCAF8Q5TAQ9 597 aa9.02□□□□□ -0.97
LRCH3-214ENST00000473177 RGL2O15211 777 aa8.99□□□□□ -0.97
LRCH3-214ENST00000473177 CHRM1P11229 460 aaPredicted RBP8.95□□□□□ -0.98
LRCH3-214ENST00000473177 ZNF579Q8NAF0 562 aaKnown RBP8.95□□□□□ -0.98
LRCH3-214ENST00000473177 DCAF1Q9Y4B6 1507 aa8.95□□□□□ -0.98
LRCH3-214ENST00000473177 ZRANB1Q9UGI0 708 aa8.94□□□□□ -0.98
LRCH3-214ENST00000473177 ZCCHC6Q5VYS8 1495 aaKnown RBP8.94□□□□□ -0.98
LRCH3-214ENST00000473177 LHX8Q68G74 356 aa8.93□□□□□ -0.98
LRCH3-214ENST00000473177 PAK3O75914 559 aaPredicted RBP8.92□□□□□ -0.98
LRCH3-214ENST00000473177 RNF25Q96BH1 459 aaPredicted RBP8.91□□□□□ -0.98
LRCH3-214ENST00000473177 DCBLD2Q96PD2 775 aa8.91□□□□□ -0.98
LRCH3-214ENST00000473177 TSPYL2Q9H2G4 693 aaPredicted RBP8.91□□□□□ -0.98
LRCH3-214ENST00000473177 RIOK3O14730 519 aaKnown RBP8.88□□□□□ -0.99
LRCH3-214ENST00000473177 PYGBP11216 843 aa8.88□□□□□ -0.99
LRCH3-214ENST00000473177 POTEIP0CG38 1075 aa8.87□□□□□ -0.99
LRCH3-214ENST00000473177 CCDC61Q9Y6R9 512 aa8.87□□□□□ -0.99
LRCH3-214ENST00000473177 SLC24A1O60721 1099 aa8.86□□□□□ -0.99
LRCH3-214ENST00000473177 TAOK2Q9UL54 1235 aa8.86□□□□□ -0.99
LRCH3-214ENST00000473177 BBXQ8WY36 941 aaPredicted RBP8.84□□□□□ -0.99
LRCH3-214ENST00000473177 VGFO15240 615 aaPredicted RBP8.82□□□□□ -1
LRCH3-214ENST00000473177 CHGAP10645 457 aaKnown RBP8.82□□□□□ -1
LRCH3-214ENST00000473177 PLCB2Q00722 1185 aa8.82□□□□□ -1
LRCH3-214ENST00000473177 HS6ST3Q8IZP7 471 aa8.82□□□□□ -1
LRCH3-214ENST00000473177 SGIP1Q9BQI5 828 aa8.81□□□□□ -1
LRCH3-214ENST00000473177 GALR2O43603 387 aaPredicted RBP8.8□□□□□ -1
LRCH3-214ENST00000473177 ZNF467Q7Z7K2 595 aaPredicted RBP8.8□□□□□ -1
LRCH3-214ENST00000473177 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.79□□□□□ -1
LRCH3-214ENST00000473177 PHF12Q96QT6 1004 aa8.78□□□□□ -1
LRCH3-214ENST00000473177 NCAPD3P42695 1498 aa8.77□□□□□ -1
LRCH3-214ENST00000473177 NESP48681 1621 aa8.77□□□□□ -1.01
LRCH3-214ENST00000473177 KIF12Q96FN5 646 aa8.77□□□□□ -1.01
LRCH3-214ENST00000473177 THOC2Q8NI27 1593 aaKnown RBP8.75□□□□□ -1.01
LRCH3-214ENST00000473177 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.75□□□□□ -1.01
LRCH3-214ENST00000473177 ZFP91Q96JP5 570 aaPredicted RBP8.75□□□□□ -1.01
LRCH3-214ENST00000473177 SMARCA2P51531 1590 aa8.74□□□□□ -1.01
LRCH3-214ENST00000473177 STK25O00506 426 aa8.74□□□□□ -1.01
LRCH3-214ENST00000473177 MAP3K13O43283 966 aa8.74□□□□□ -1.01
LRCH3-214ENST00000473177 PCDHB13Q9Y5F0 798 aa8.74□□□□□ -1.01
LRCH3-214ENST00000473177 PDAP1Q13442 181 aaKnown RBP8.73□□□□□ -1.01
LRCH3-214ENST00000473177 PCDHB8Q9UN66 801 aa8.73□□□□□ -1.01
LRCH3-214ENST00000473177 IFNL1Q8IU54 200 aa8.72□□□□□ -1.01
LRCH3-214ENST00000473177 BCL11BQ9C0K0 894 aaPredicted RBP8.72□□□□□ -1.01
LRCH3-214ENST00000473177 SPRYD3Q8NCJ5 442 aa8.7□□□□□ -1.02
LRCH3-214ENST00000473177 STK24Q9Y6E0 443 aa8.7□□□□□ -1.02
LRCH3-214ENST00000473177 ATAD2BQ9ULI0 1458 aa8.7□□□□□ -1.02
LRCH3-214ENST00000473177 PAXIP1Q6ZW49 1069 aaPredicted RBP8.69□□□□□ -1.02
LRCH3-214ENST00000473177 PSEN1P49768 467 aa8.68□□□□□ -1.02
LRCH3-214ENST00000473177 NKX1-1Q15270 411 aaPredicted RBP8.68□□□□□ -1.02
LRCH3-214ENST00000473177 MS4A3Q96HJ5 214 aa8.68□□□□□ -1.02
LRCH3-214ENST00000473177 HMGXB3Q12766 1538 aa8.68□□□□□ -1.02
LRCH3-214ENST00000473177 CFAP44Q96MT7 982 aa8.67□□□□□ -1.02
LRCH3-214ENST00000473177 PDS5BQ9NTI5 1447 aa8.66□□□□□ -1.02
LRCH3-214ENST00000473177 LAMC3Q9Y6N6 1575 aa8.65□□□□□ -1.02
LRCH3-214ENST00000473177 HAP1P54257 671 aaPredicted RBP8.64□□□□□ -1.03
LRCH3-214ENST00000473177 BAZ1AQ9NRL2 1556 aaPredicted RBP8.64□□□□□ -1.03
LRCH3-214ENST00000473177 BAZ1BQ9UIG0 1483 aaKnown RBP8.64□□□□□ -1.03
LRCH3-214ENST00000473177 ASTLQ6HA08 431 aaPredicted RBP8.63□□□□□ -1.03
LRCH3-214ENST00000473177 GTPBP6O43824 516 aaPredicted RBP8.62□□□□□ -1.03
LRCH3-214ENST00000473177 SLC39A7Q92504 469 aa8.62□□□□□ -1.03
LRCH3-214ENST00000473177 RYDENQ9NUL5 291 aaKnown RBP8.61□□□□□ -1.03
LRCH3-214ENST00000473177 KIF21AQ7Z4S6 1674 aa8.61□□□□□ -1.03
LRCH3-214ENST00000473177 MRC2Q9UBG0 1479 aa8.6□□□□□ -1.03
LRCH3-214ENST00000473177 ATMINO43313 823 aaPredicted RBP8.6□□□□□ -1.03
LRCH3-214ENST00000473177 METRNQ9UJH8 293 aa8.6□□□□□ -1.03
LRCH3-214ENST00000473177 C7P10643 843 aa8.59□□□□□ -1.03
LRCH3-214ENST00000473177 PELP1Q8IZL8 1130 aaKnown RBP8.59□□□□□ -1.03
LRCH3-214ENST00000473177 OTUD5Q96G74 571 aa8.58□□□□□ -1.04
LRCH3-214ENST00000473177 SMARCA4P51532 1647 aa8.58□□□□□ -1.04
LRCH3-214ENST00000473177 POTEB2H3BUK9 544 aa8.57□□□□□ -1.04
LRCH3-214ENST00000473177 TMEM106CQ9BVX2 250 aa8.57□□□□□ -1.04
LRCH3-214ENST00000473177 CABP2Q9NPB3 220 aa8.57□□□□□ -1.04
LRCH3-214ENST00000473177 TRPC6Q9Y210 931 aa8.57□□□□□ -1.04
LRCH3-214ENST00000473177 TIE1P35590 1138 aa8.56□□□□□ -1.04
LRCH3-214ENST00000473177 VSIG10Q8N0Z9 540 aa8.56□□□□□ -1.04
LRCH3-214ENST00000473177 WDR62O43379 1518 aa8.55□□□□□ -1.04
LRCH3-214ENST00000473177 EFCAB3Q8N7B9 438 aa8.55□□□□□ -1.04
LRCH3-214ENST00000473177 TSHZ2Q9NRE2 1034 aa8.55□□□□□ -1.04
LRCH3-214ENST00000473177 SOX12O15370 315 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms