RNA–Protein interactions for RNA: ENST00000472989.5

TM2D1-207, Transcript of TM2 domain containing 1, humanhuman

TSL 3

Gene TM2D1, Length 531 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-207ENST00000472989 C7P10643 843 aa12.99□□□□□ -0.33
TM2D1-207ENST00000472989 SLC39A7Q92504 469 aa12.99□□□□□ -0.33
TM2D1-207ENST00000472989 SPDYE4A6NLX3 237 aa12.98□□□□□ -0.33
TM2D1-207ENST00000472989 ATMINO43313 823 aaPredicted RBP12.97□□□□□ -0.33
TM2D1-207ENST00000472989 ASTLQ6HA08 431 aaPredicted RBP12.97□□□□□ -0.33
TM2D1-207ENST00000472989 MAMSTRQ6ZN01 415 aa12.97□□□□□ -0.33
TM2D1-207ENST00000472989 MS4A3Q96HJ5 214 aa12.96□□□□□ -0.33
TM2D1-207ENST00000472989 LCE2DQ5TA82 110 aaPredicted RBP12.93□□□□□ -0.34
TM2D1-207ENST00000472989 MNX1P50219 401 aaPredicted RBP12.9□□□□□ -0.34
TM2D1-207ENST00000472989 SCUBE2Q9NQ36 999 aa12.89□□□□□ -0.35
TM2D1-207ENST00000472989 ATN1P54259 1190 aaPredicted RBP12.83□□□□□ -0.36
TM2D1-207ENST00000472989 TSPYL2Q9H2G4 693 aaPredicted RBP12.81□□□□□ -0.36
TM2D1-207ENST00000472989 PROM2Q8N271 834 aa12.79□□□□□ -0.36
TM2D1-207ENST00000472989 POTEFA5A3E0 1075 aa12.73□□□□□ -0.37
TM2D1-207ENST00000472989 CDAN1Q8IWY9 1227 aa12.73□□□□□ -0.37
TM2D1-207ENST00000472989 BMP2KQ9NSY1 1161 aaPredicted RBP12.69□□□□□ -0.38
TM2D1-207ENST00000472989 KIF12Q96FN5 646 aa12.68□□□□□ -0.38
TM2D1-207ENST00000472989 CCDC61Q9Y6R9 512 aa12.68□□□□□ -0.38
TM2D1-207ENST00000472989 TRPC6Q9Y210 931 aa12.67□□□□□ -0.38
TM2D1-207ENST00000472989 SEC24BO95487 1268 aa12.64□□□□□ -0.39
TM2D1-207ENST00000472989 COLQQ9Y215 455 aaPredicted RBP12.62□□□□□ -0.39
TM2D1-207ENST00000472989 MAP3K13O43283 966 aa12.59□□□□□ -0.39
TM2D1-207ENST00000472989 TIE1P35590 1138 aa12.58□□□□□ -0.4
TM2D1-207ENST00000472989 TTLL13PA6NNM8 815 aa12.52□□□□□ -0.41
TM2D1-207ENST00000472989 ST18O60284 1047 aa12.52□□□□□ -0.41
TM2D1-207ENST00000472989 SLAIN1Q8ND83 568 aa12.51□□□□□ -0.41
TM2D1-207ENST00000472989 TRIM35Q9UPQ4 493 aa12.46□□□□□ -0.41
TM2D1-207ENST00000472989 MMRN1Q13201 1228 aa12.45□□□□□ -0.42
TM2D1-207ENST00000472989 RASEFQ8IZ41 740 aa12.45□□□□□ -0.42
TM2D1-207ENST00000472989 IER5LQ5T953 404 aa12.42□□□□□ -0.42
TM2D1-207ENST00000472989 SPNS2Q8IVW8 549 aa12.42□□□□□ -0.42
TM2D1-207ENST00000472989 MIER1Q8N108 512 aa12.41□□□□□ -0.42
TM2D1-207ENST00000472989 PLEKHG5O94827 1062 aa12.4□□□□□ -0.42
TM2D1-207ENST00000472989 PCDHB13Q9Y5F0 798 aa12.37□□□□□ -0.43
TM2D1-207ENST00000472989 PLCG2P16885 1265 aa12.32□□□□□ -0.44
TM2D1-207ENST00000472989 SGIP1Q9BQI5 828 aa12.32□□□□□ -0.44
TM2D1-207ENST00000472989 MARVELD3Q96A59 401 aa12.29□□□□□ -0.44
TM2D1-207ENST00000472989 TMEM106CQ9BVX2 250 aa12.29□□□□□ -0.44
TM2D1-207ENST00000472989 IFNL1Q8IU54 200 aa12.27□□□□□ -0.45
TM2D1-207ENST00000472989 TMEM121BQ9BXQ6 578 aaPredicted RBP12.27□□□□□ -0.45
TM2D1-207ENST00000472989 NUBP1P53384 320 aa12.26□□□□□ -0.45
TM2D1-207ENST00000472989 SNPHO15079 494 aa12.24□□□□□ -0.45
TM2D1-207ENST00000472989 ZBTB47Q9UFB7 747 aaPredicted RBP12.24□□□□□ -0.45
TM2D1-207ENST00000472989 IRX5P78411 483 aaPredicted RBP12.22□□□□□ -0.45
TM2D1-207ENST00000472989 PLCD3Q8N3E9 789 aa12.22□□□□□ -0.45
TM2D1-207ENST00000472989 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.19□□□□□ -0.46
TM2D1-207ENST00000472989 OCEL1Q9H607 264 aa12.18□□□□□ -0.46
TM2D1-207ENST00000472989 FAM212AQ96EL1 285 aa12.12□□□□□ -0.47
TM2D1-207ENST00000472989 EMP3P54852 163 aa12.11□□□□□ -0.47
TM2D1-207ENST00000472989 FKBP8Q14318 412 aa12.1□□□□□ -0.47
TM2D1-207ENST00000472989 FAM205CA6NFA0 338 aa12.05□□□□□ -0.48
TM2D1-207ENST00000472989 POTEB3A0JP26 581 aa12.04□□□□□ -0.48
TM2D1-207ENST00000472989 POTEBQ6S5H4 581 aa12.04□□□□□ -0.48
TM2D1-207ENST00000472989 KRTAP3-3Q9BYR6 98 aa12.04□□□□□ -0.48
TM2D1-207ENST00000472989 KRTAP3-2Q9BYR7 98 aa12.04□□□□□ -0.48
TM2D1-207ENST00000472989 HS3ST6Q96QI5 342 aa12.03□□□□□ -0.48
TM2D1-207ENST00000472989 PYGBP11216 843 aa12□□□□□ -0.49
TM2D1-207ENST00000472989 C3orf67Q6ZVT6 689 aa11.99□□□□□ -0.49
TM2D1-207ENST00000472989 PCDHB8Q9UN66 801 aa11.99□□□□□ -0.49
TM2D1-207ENST00000472989 DCAF8Q5TAQ9 597 aa11.98□□□□□ -0.49
TM2D1-207ENST00000472989 L3MBTL3Q96JM7 780 aaPredicted RBP11.93□□□□□ -0.5
TM2D1-207ENST00000472989 PDCD7Q8N8D1 485 aaKnown RBP11.92□□□□□ -0.5
TM2D1-207ENST00000472989 FBXO3Q9UK99 471 aa11.92□□□□□ -0.5
TM2D1-207ENST00000472989 GOLGA2Q08379 1002 aa11.89□□□□□ -0.51
TM2D1-207ENST00000472989 MKRN3Q13064 507 aaKnown RBP11.88□□□□□ -0.51
TM2D1-207ENST00000472989 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.84□□□□□ -0.51
TM2D1-207ENST00000472989 CHRM1P11229 460 aaPredicted RBP11.83□□□□□ -0.52
TM2D1-207ENST00000472989 ZNF467Q7Z7K2 595 aaPredicted RBP11.82□□□□□ -0.52
TM2D1-207ENST00000472989 GSE1Q14687 1217 aa11.81□□□□□ -0.52
TM2D1-207ENST00000472989 VASPP50552 380 aaPredicted RBP11.79□□□□□ -0.52
TM2D1-207ENST00000472989 RNF166Q96A37 237 aaPredicted RBP11.79□□□□□ -0.52
TM2D1-207ENST00000472989 ILDR1Q86SU0 546 aaPredicted RBP11.77□□□□□ -0.53
TM2D1-207ENST00000472989 ERBB3P21860 1342 aa11.77□□□□□ -0.53
TM2D1-207ENST00000472989 DPY19L2Q6NUT2 758 aa11.75□□□□□ -0.53
TM2D1-207ENST00000472989 ZNF710Q8N1W2 664 aa11.75□□□□□ -0.53
TM2D1-207ENST00000472989 HOXB3P14651 431 aaPredicted RBP11.74□□□□□ -0.53
TM2D1-207ENST00000472989 HOXB1P14653 301 aaPredicted RBP11.71□□□□□ -0.53
TM2D1-207ENST00000472989 G3V3G9 751 aa11.7□□□□□ -0.54
TM2D1-207ENST00000472989 PSEN1P49768 467 aa11.7□□□□□ -0.54
TM2D1-207ENST00000472989 MYT1LQ9UL68 1186 aa11.7□□□□□ -0.54
TM2D1-207ENST00000472989 KLHL34Q8N239 644 aa11.69□□□□□ -0.54
TM2D1-207ENST00000472989 BOLA1Q9Y3E2 137 aa11.66□□□□□ -0.54
TM2D1-207ENST00000472989 DOK7Q18PE1 504 aa11.65□□□□□ -0.54
TM2D1-207ENST00000472989 VARS2Q5ST30 1063 aaKnown RBP11.65□□□□□ -0.54
TM2D1-207ENST00000472989 PDAP1Q13442 181 aaKnown RBP11.64□□□□□ -0.55
TM2D1-207ENST00000472989 CABP2Q9NPB3 220 aa11.58□□□□□ -0.56
TM2D1-207ENST00000472989 RIMBP2O15034 1052 aa11.56□□□□□ -0.56
TM2D1-207ENST00000472989 IFNLR1Q8IU57 520 aaPredicted RBP11.56□□□□□ -0.56
TM2D1-207ENST00000472989 SPOCK2Q92563 424 aa11.56□□□□□ -0.56
TM2D1-207ENST00000472989 ZNF687Q8N1G0 1237 aa11.55□□□□□ -0.56
TM2D1-207ENST00000472989 ANKRD13DQ6ZTN6 518 aa11.51□□□□□ -0.57
TM2D1-207ENST00000472989 PTGER2P43116 358 aa11.47□□□□□ -0.57
TM2D1-207ENST00000472989 CIZ1Q9ULV3 898 aaPredicted RBP11.46□□□□□ -0.57
TM2D1-207ENST00000472989 TRIM41Q8WV44 630 aa11.44□□□□□ -0.58
TM2D1-207ENST00000472989 GPR153Q6NV75 609 aa11.43□□□□□ -0.58
TM2D1-207ENST00000472989 ZSWIM6Q9HCJ5 1215 aa11.43□□□□□ -0.58
TM2D1-207ENST00000472989 TMEM92Q6UXU6 159 aa11.4□□□□□ -0.58
TM2D1-207ENST00000472989 ARSIQ5FYB1 569 aa11.38□□□□□ -0.59
TM2D1-207ENST00000472989 EFCAB3Q8N7B9 438 aa11.37□□□□□ -0.59
TM2D1-207ENST00000472989 PLA2G2EQ9NZK7 142 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms