RNA–Protein interactions for RNA: ENST00000472649.2

LINC02339-201, Transcript of long intergenic non-protein coding RNA 2339, humanhuman

TSL 1 (best) BASIC

Gene LINC02339, Length 752 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02339-201ENST00000472649 PCDH10Q9P2E7 1040 aa14.08□□□□□ -0.16
LINC02339-201ENST00000472649 PLCD3Q8N3E9 789 aa14.05□□□□□ -0.16
LINC02339-201ENST00000472649 PHF12Q96QT6 1004 aa14.03□□□□□ -0.16
LINC02339-201ENST00000472649 ZBTB47Q9UFB7 747 aaPredicted RBP14.01□□□□□ -0.17
LINC02339-201ENST00000472649 TSPYL2Q9H2G4 693 aaPredicted RBP13.99□□□□□ -0.17
LINC02339-201ENST00000472649 PELP1Q8IZL8 1130 aaKnown RBP13.92□□□□□ -0.18
LINC02339-201ENST00000472649 FBXO3Q9UK99 471 aa13.91□□□□□ -0.18
LINC02339-201ENST00000472649 MS4A3Q96HJ5 214 aa13.85□□□□□ -0.19
LINC02339-201ENST00000472649 CCDC61Q9Y6R9 512 aa13.85□□□□□ -0.19
LINC02339-201ENST00000472649 MAMSTRQ6ZN01 415 aa13.83□□□□□ -0.2
LINC02339-201ENST00000472649 C7P10643 843 aa13.82□□□□□ -0.2
LINC02339-201ENST00000472649 ASTLQ6HA08 431 aaPredicted RBP13.81□□□□□ -0.2
LINC02339-201ENST00000472649 RASEFQ8IZ41 740 aa13.81□□□□□ -0.2
LINC02339-201ENST00000472649 METRNQ9UJH8 293 aa13.81□□□□□ -0.2
LINC02339-201ENST00000472649 SLC39A7Q92504 469 aa13.8□□□□□ -0.2
LINC02339-201ENST00000472649 POTEJP0CG39 1038 aa13.79□□□□□ -0.2
LINC02339-201ENST00000472649 FAM212AQ96EL1 285 aa13.77□□□□□ -0.21
LINC02339-201ENST00000472649 KIF12Q96FN5 646 aa13.77□□□□□ -0.21
LINC02339-201ENST00000472649 ATMINO43313 823 aaPredicted RBP13.76□□□□□ -0.21
LINC02339-201ENST00000472649 LCE2DQ5TA82 110 aaPredicted RBP13.73□□□□□ -0.21
LINC02339-201ENST00000472649 FAM163AQ96GL9 167 aaPredicted RBP13.72□□□□□ -0.21
LINC02339-201ENST00000472649 MAP3K13O43283 966 aa13.7□□□□□ -0.22
LINC02339-201ENST00000472649 NUBP1P53384 320 aa13.7□□□□□ -0.22
LINC02339-201ENST00000472649 SGIP1Q9BQI5 828 aa13.67□□□□□ -0.22
LINC02339-201ENST00000472649 SCUBE2Q9NQ36 999 aa13.66□□□□□ -0.22
LINC02339-201ENST00000472649 KLHL34Q8N239 644 aa13.65□□□□□ -0.22
LINC02339-201ENST00000472649 PCDHB13Q9Y5F0 798 aa13.65□□□□□ -0.22
LINC02339-201ENST00000472649 TIE1P35590 1138 aa13.64□□□□□ -0.23
LINC02339-201ENST00000472649 VASPP50552 380 aaPredicted RBP13.63□□□□□ -0.23
LINC02339-201ENST00000472649 DCAF8Q5TAQ9 597 aa13.61□□□□□ -0.23
LINC02339-201ENST00000472649 ATN1P54259 1190 aaPredicted RBP13.6□□□□□ -0.23
LINC02339-201ENST00000472649 BMP2KQ9NSY1 1161 aaPredicted RBP13.6□□□□□ -0.23
LINC02339-201ENST00000472649 TRPC6Q9Y210 931 aa13.53□□□□□ -0.24
LINC02339-201ENST00000472649 TTLL13PA6NNM8 815 aa13.52□□□□□ -0.25
LINC02339-201ENST00000472649 GSE1Q14687 1217 aa13.52□□□□□ -0.25
LINC02339-201ENST00000472649 POTEFA5A3E0 1075 aa13.5□□□□□ -0.25
LINC02339-201ENST00000472649 SEC24BO95487 1268 aa13.5□□□□□ -0.25
LINC02339-201ENST00000472649 IFNL1Q8IU54 200 aa13.5□□□□□ -0.25
LINC02339-201ENST00000472649 CDAN1Q8IWY9 1227 aa13.48□□□□□ -0.25
LINC02339-201ENST00000472649 PYGBP11216 843 aa13.47□□□□□ -0.25
LINC02339-201ENST00000472649 TRIM35Q9UPQ4 493 aa13.47□□□□□ -0.25
LINC02339-201ENST00000472649 IER5LQ5T953 404 aa13.46□□□□□ -0.25
LINC02339-201ENST00000472649 TMEM106CQ9BVX2 250 aa13.45□□□□□ -0.26
LINC02339-201ENST00000472649 SPOCK2Q92563 424 aa13.39□□□□□ -0.27
LINC02339-201ENST00000472649 ZNF467Q7Z7K2 595 aaPredicted RBP13.38□□□□□ -0.27
LINC02339-201ENST00000472649 PLCG2P16885 1265 aa13.35□□□□□ -0.27
LINC02339-201ENST00000472649 PCDHB8Q9UN66 801 aa13.34□□□□□ -0.27
LINC02339-201ENST00000472649 CIZ1Q9ULV3 898 aaPredicted RBP13.32□□□□□ -0.28
LINC02339-201ENST00000472649 COLQQ9Y215 455 aaPredicted RBP13.32□□□□□ -0.28
LINC02339-201ENST00000472649 CHRM1P11229 460 aaPredicted RBP13.31□□□□□ -0.28
LINC02339-201ENST00000472649 GOLGA2Q08379 1002 aa13.3□□□□□ -0.28
LINC02339-201ENST00000472649 IFNLR1Q8IU57 520 aaPredicted RBP13.3□□□□□ -0.28
LINC02339-201ENST00000472649 ST18O60284 1047 aa13.25□□□□□ -0.29
LINC02339-201ENST00000472649 OCEL1Q9H607 264 aa13.23□□□□□ -0.29
LINC02339-201ENST00000472649 MKRN3Q13064 507 aaKnown RBP13.22□□□□□ -0.29
LINC02339-201ENST00000472649 IRX5P78411 483 aaPredicted RBP13.21□□□□□ -0.29
LINC02339-201ENST00000472649 SLAIN1Q8ND83 568 aa13.21□□□□□ -0.29
LINC02339-201ENST00000472649 MMRN1Q13201 1228 aa13.2□□□□□ -0.3
LINC02339-201ENST00000472649 TRIM41Q8WV44 630 aa13.2□□□□□ -0.3
LINC02339-201ENST00000472649 PSEN1P49768 467 aa13.19□□□□□ -0.3
LINC02339-201ENST00000472649 PDAP1Q13442 181 aaKnown RBP13.18□□□□□ -0.3
LINC02339-201ENST00000472649 SPNS2Q8IVW8 549 aa13.17□□□□□ -0.3
LINC02339-201ENST00000472649 TMEM121BQ9BXQ6 578 aaPredicted RBP13.11□□□□□ -0.31
LINC02339-201ENST00000472649 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.09□□□□□ -0.31
LINC02339-201ENST00000472649 L3MBTL3Q96JM7 780 aaPredicted RBP13.08□□□□□ -0.32
LINC02339-201ENST00000472649 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.08□□□□□ -0.32
LINC02339-201ENST00000472649 C3orf67Q6ZVT6 689 aa13.05□□□□□ -0.32
LINC02339-201ENST00000472649 CABP2Q9NPB3 220 aa13.04□□□□□ -0.32
LINC02339-201ENST00000472649 G3V3G9 751 aa13.02□□□□□ -0.33
LINC02339-201ENST00000472649 SNPHO15079 494 aa13.02□□□□□ -0.33
LINC02339-201ENST00000472649 PDCD7Q8N8D1 485 aaKnown RBP13.01□□□□□ -0.33
LINC02339-201ENST00000472649 RIOK3O14730 519 aaKnown RBP12.94□□□□□ -0.34
LINC02339-201ENST00000472649 TAOK2Q9UL54 1235 aa12.93□□□□□ -0.34
LINC02339-201ENST00000472649 MARVELD3Q96A59 401 aa12.91□□□□□ -0.34
LINC02339-201ENST00000472649 VGFO15240 615 aaPredicted RBP12.89□□□□□ -0.35
LINC02339-201ENST00000472649 ILDR1Q86SU0 546 aaPredicted RBP12.89□□□□□ -0.35
LINC02339-201ENST00000472649 BOLA1Q9Y3E2 137 aa12.87□□□□□ -0.35
LINC02339-201ENST00000472649 EFCAB3Q8N7B9 438 aa12.85□□□□□ -0.35
LINC02339-201ENST00000472649 DPY19L2Q6NUT2 758 aa12.83□□□□□ -0.36
LINC02339-201ENST00000472649 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.81□□□□□ -0.36
LINC02339-201ENST00000472649 SOX12O15370 315 aa12.81□□□□□ -0.36
LINC02339-201ENST00000472649 ZFP91Q96JP5 570 aaPredicted RBP12.81□□□□□ -0.36
LINC02339-201ENST00000472649 RNF25Q96BH1 459 aaPredicted RBP12.8□□□□□ -0.36
LINC02339-201ENST00000472649 EMP3P54852 163 aa12.78□□□□□ -0.36
LINC02339-201ENST00000472649 KRTAP3-3Q9BYR6 98 aa12.77□□□□□ -0.37
LINC02339-201ENST00000472649 KRTAP3-2Q9BYR7 98 aa12.77□□□□□ -0.37
LINC02339-201ENST00000472649 ECM2O94769 699 aaPredicted RBP12.76□□□□□ -0.37
LINC02339-201ENST00000472649 HS3ST6Q96QI5 342 aa12.73□□□□□ -0.37
LINC02339-201ENST00000472649 POTEB3A0JP26 581 aa12.71□□□□□ -0.37
LINC02339-201ENST00000472649 POTEBQ6S5H4 581 aa12.71□□□□□ -0.37
LINC02339-201ENST00000472649 BCL11BQ9C0K0 894 aaPredicted RBP12.71□□□□□ -0.37
LINC02339-201ENST00000472649 STK24Q9Y6E0 443 aa12.7□□□□□ -0.38
LINC02339-201ENST00000472649 NLRP6P59044 892 aa12.69□□□□□ -0.38
LINC02339-201ENST00000472649 FAM205CA6NFA0 338 aa12.68□□□□□ -0.38
LINC02339-201ENST00000472649 ZNF710Q8N1W2 664 aa12.68□□□□□ -0.38
LINC02339-201ENST00000472649 STK25O00506 426 aa12.67□□□□□ -0.38
LINC02339-201ENST00000472649 DOK7Q18PE1 504 aa12.67□□□□□ -0.38
LINC02339-201ENST00000472649 MICALL2Q8IY33 904 aa12.67□□□□□ -0.38
LINC02339-201ENST00000472649 PHF8Q9UPP1 1060 aa12.67□□□□□ -0.38
LINC02339-201ENST00000472649 RIMBP2O15034 1052 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 1101.7 ms