RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 HECW2Q9P2P5 1572 aa16.13■□□□□ 0.17
CHMP2B-203ENST00000471660 FBXO41Q8TF61 875 aa16.11■□□□□ 0.17
CHMP2B-203ENST00000471660 CSRNP3Q8WYN3 585 aa16.11■□□□□ 0.17
CHMP2B-203ENST00000471660 KDM6BO15054 1643 aa16.1■□□□□ 0.17
CHMP2B-203ENST00000471660 CCDC88BA6NC98 1476 aa16.1■□□□□ 0.17
CHMP2B-203ENST00000471660 SYNJ2O15056 1496 aa16.09■□□□□ 0.17
CHMP2B-203ENST00000471660 POLA1P09884 1462 aaPredicted RBP16.08■□□□□ 0.17
CHMP2B-203ENST00000471660 CHMP7Q8WUX9 453 aaPredicted RBP16.04■□□□□ 0.16
CHMP2B-203ENST00000471660 GRIN2BQ13224 1484 aa16.02■□□□□ 0.16
CHMP2B-203ENST00000471660 ABCC10Q5T3U5 1492 aa16.01■□□□□ 0.15
CHMP2B-203ENST00000471660 LMTK3Q96Q04 1460 aa16■□□□□ 0.15
CHMP2B-203ENST00000471660 DIP2BQ9P265 1576 aa15.99■□□□□ 0.15
CHMP2B-203ENST00000471660 TSHZ2Q9NRE2 1034 aa15.99■□□□□ 0.15
CHMP2B-203ENST00000471660 EEA1Q15075 1411 aa15.98■□□□□ 0.15
CHMP2B-203ENST00000471660 ADGRL1O94910 1474 aa15.98■□□□□ 0.15
CHMP2B-203ENST00000471660 PBRM1Q86U86 1689 aa15.97■□□□□ 0.15
CHMP2B-203ENST00000471660 SHROOM2Q13796 1616 aa15.97■□□□□ 0.15
CHMP2B-203ENST00000471660 MAPKBP1O60336 1514 aa15.96■□□□□ 0.15
CHMP2B-203ENST00000471660 CEP170Q5SW79 1584 aa15.96■□□□□ 0.15
CHMP2B-203ENST00000471660 RAD54L2Q9Y4B4 1467 aa15.96■□□□□ 0.15
CHMP2B-203ENST00000471660 TDRD9Q8NDG6 1382 aaKnown RBP15.95■□□□□ 0.14
CHMP2B-203ENST00000471660 SOGA1O94964 1423 aa15.94■□□□□ 0.14
CHMP2B-203ENST00000471660 CCER1Q8TC90 406 aaPredicted RBP15.91■□□□□ 0.14
CHMP2B-203ENST00000471660 SOCS7O14512 581 aa15.9■□□□□ 0.14
CHMP2B-203ENST00000471660 ZNF316A6NFI3 1004 aaPredicted RBP15.89■□□□□ 0.13
CHMP2B-203ENST00000471660 SUPT16HQ9Y5B9 1047 aaKnown RBP15.89■□□□□ 0.13
CHMP2B-203ENST00000471660 YTHDC1Q96MU7 727 aaKnown RBP15.86■□□□□ 0.13
CHMP2B-203ENST00000471660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.86■□□□□ 0.13
CHMP2B-203ENST00000471660 FAM69CQ0P6D2 419 aa15.86■□□□□ 0.13
CHMP2B-203ENST00000471660 FGD5Q6ZNL6 1462 aa15.83■□□□□ 0.12
CHMP2B-203ENST00000471660 NUP160Q12769 1436 aa15.83■□□□□ 0.12
CHMP2B-203ENST00000471660 TSPOAP1O95153 1857 aa15.8■□□□□ 0.12
CHMP2B-203ENST00000471660 GRIN2AQ12879 1464 aa15.8■□□□□ 0.12
CHMP2B-203ENST00000471660 ABCA5Q8WWZ7 1642 aa15.78■□□□□ 0.12
CHMP2B-203ENST00000471660 WRNQ14191 1432 aaPredicted RBP eCLIP15.77■□□□□ 0.12
CHMP2B-203ENST00000471660 TOP2BQ02880 1626 aa15.77■□□□□ 0.11
CHMP2B-203ENST00000471660 MIER1Q8N108 512 aa15.76■□□□□ 0.11
CHMP2B-203ENST00000471660 ADAMTS12P58397 1594 aa15.74■□□□□ 0.11
CHMP2B-203ENST00000471660 ADCY10Q96PN6 1610 aa15.71■□□□□ 0.11
CHMP2B-203ENST00000471660 BIVM-ERCC5R4GMW8 1640 aa15.71■□□□□ 0.11
CHMP2B-203ENST00000471660 PPRC1Q5VV67 1664 aaKnown RBP15.71■□□□□ 0.11
CHMP2B-203ENST00000471660 NPM1P06748 294 aaKnown RBP eCLIP15.69■□□□□ 0.1
CHMP2B-203ENST00000471660 ILDR2Q71H61 639 aa15.67■□□□□ 0.1
CHMP2B-203ENST00000471660 GLI2P10070 1586 aa15.66■□□□□ 0.1
CHMP2B-203ENST00000471660 CUX1P39880 1505 aa15.66■□□□□ 0.1
CHMP2B-203ENST00000471660 MYT1LQ9UL68 1186 aa15.66■□□□□ 0.1
CHMP2B-203ENST00000471660 ABCA10Q8WWZ4 1543 aa15.66■□□□□ 0.1
CHMP2B-203ENST00000471660 KIF21BO75037 1637 aa15.66■□□□□ 0.1
CHMP2B-203ENST00000471660 PRG4Q92954 1404 aaPredicted RBP15.65■□□□□ 0.1
CHMP2B-203ENST00000471660 TNIKQ9UKE5 1360 aa15.64■□□□□ 0.09
CHMP2B-203ENST00000471660 DISP3Q9P2K9 1392 aa15.62■□□□□ 0.09
CHMP2B-203ENST00000471660 GOLGA3Q08378 1498 aa15.6■□□□□ 0.09
CHMP2B-203ENST00000471660 SPATA31D1Q6ZQQ2 1576 aa15.6■□□□□ 0.09
CHMP2B-203ENST00000471660 FHAD1B1AJZ9 1412 aa15.57■□□□□ 0.08
CHMP2B-203ENST00000471660 RUSC2Q8N2Y8 1516 aa15.54■□□□□ 0.08
CHMP2B-203ENST00000471660 RBM19Q9Y4C8 960 aaKnown RBP15.53■□□□□ 0.08
CHMP2B-203ENST00000471660 ERICH3Q5RHP9 1530 aa15.52■□□□□ 0.07
CHMP2B-203ENST00000471660 TEX14Q8IWB6 1497 aa15.51■□□□□ 0.07
CHMP2B-203ENST00000471660 ERICH6BQ5W0A0 696 aa15.51■□□□□ 0.07
CHMP2B-203ENST00000471660 ANO8Q9HCE9 1232 aaPredicted RBP15.51■□□□□ 0.07
CHMP2B-203ENST00000471660 MAP3K4Q9Y6R4 1608 aa15.51■□□□□ 0.07
CHMP2B-203ENST00000471660 UBE2Q2Q8WVN8 375 aa15.5■□□□□ 0.07
CHMP2B-203ENST00000471660 COL17A1Q9UMD9 1497 aaPredicted RBP15.5■□□□□ 0.07
CHMP2B-203ENST00000471660 PLB1Q6P1J6 1458 aa15.49■□□□□ 0.07
CHMP2B-203ENST00000471660 JPH4Q96JJ6 628 aa15.46■□□□□ 0.07
CHMP2B-203ENST00000471660 PCF11O94913 1555 aaKnown RBP15.46■□□□□ 0.07
CHMP2B-203ENST00000471660 CEP162Q5TB80 1403 aa15.46■□□□□ 0.06
CHMP2B-203ENST00000471660 KIAA0586Q9BVV6 1533 aa15.45■□□□□ 0.06
CHMP2B-203ENST00000471660 FANCIQ9NVI1 1328 aa15.44■□□□□ 0.06
CHMP2B-203ENST00000471660 MSH5O43196 834 aa15.44■□□□□ 0.06
CHMP2B-203ENST00000471660 ADAMTSL3P82987 1691 aa15.41■□□□□ 0.06
CHMP2B-203ENST00000471660 KIF27Q86VH2 1401 aa15.41■□□□□ 0.06
CHMP2B-203ENST00000471660 ABCC2Q92887 1545 aa15.41■□□□□ 0.06
CHMP2B-203ENST00000471660 ASXL2Q76L83 1435 aa15.4■□□□□ 0.06
CHMP2B-203ENST00000471660 PRXQ9BXM0 1461 aa15.39■□□□□ 0.05
CHMP2B-203ENST00000471660 CERKQ8TCT0 537 aa15.39■□□□□ 0.05
CHMP2B-203ENST00000471660 PTPRMP28827 1452 aa15.37■□□□□ 0.05
CHMP2B-203ENST00000471660 CUL7Q14999 1698 aa15.36■□□□□ 0.05
CHMP2B-203ENST00000471660 DEKP35659 375 aaKnown RBP15.36■□□□□ 0.05
CHMP2B-203ENST00000471660 EPRSP07814 1512 aaKnown RBP15.35■□□□□ 0.05
CHMP2B-203ENST00000471660 UHRF1BP1LA0JNW5 1464 aa15.33■□□□□ 0.05
CHMP2B-203ENST00000471660 UBTFP17480 764 aaKnown RBP15.3■□□□□ 0.04
CHMP2B-203ENST00000471660 SALL2Q9Y467 1007 aaPredicted RBP15.3■□□□□ 0.04
CHMP2B-203ENST00000471660 CLIP1P30622 1438 aa15.28■□□□□ 0.04
CHMP2B-203ENST00000471660 VPS8Q8N3P4 1428 aa15.26■□□□□ 0.03
CHMP2B-203ENST00000471660 RAPGEF2Q9Y4G8 1499 aa15.26■□□□□ 0.03
CHMP2B-203ENST00000471660 MAGI3Q5TCQ9 1506 aa15.25■□□□□ 0.03
CHMP2B-203ENST00000471660 PTPRGP23470 1445 aa15.25■□□□□ 0.03
CHMP2B-203ENST00000471660 CFAP43Q8NDM7 1665 aa15.25■□□□□ 0.03
CHMP2B-203ENST00000471660 BCORL1Q5H9F3 1711 aa15.25■□□□□ 0.03
CHMP2B-203ENST00000471660 FKBP8Q14318 412 aa15.23■□□□□ 0.03
CHMP2B-203ENST00000471660 MADDQ8WXG6 1647 aa15.21■□□□□ 0.03
CHMP2B-203ENST00000471660 KDM5BQ9UGL1 1544 aa15.21■□□□□ 0.03
CHMP2B-203ENST00000471660 BCANQ96GW7 911 aa15.2■□□□□ 0.02
CHMP2B-203ENST00000471660 ZCCHC11Q5TAX3 1644 aaKnown RBP15.19■□□□□ 0.02
CHMP2B-203ENST00000471660 IQSEC2Q5JU85 1478 aa15.15■□□□□ 0.02
CHMP2B-203ENST00000471660 UACAQ9BZF9 1416 aa15.15■□□□□ 0.02
CHMP2B-203ENST00000471660 ARAP3Q8WWN8 1544 aa15.15■□□□□ 0.02
CHMP2B-203ENST00000471660 EIF5BO60841 1220 aaKnown RBP15.15■□□□□ 0.02
CHMP2B-203ENST00000471660 RIMS1Q86UR5 1692 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms