RNA–Protein interactions for RNA: ENST00000471134.1

TRA2B-210, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-210ENST00000471134 LHX8Q68G74 356 aa17.16■□□□□ 0.34
TRA2B-210ENST00000471134 NUBP1P53384 320 aa17.14■□□□□ 0.33
TRA2B-210ENST00000471134 FBXO3Q9UK99 471 aa17.13■□□□□ 0.33
TRA2B-210ENST00000471134 KIF12Q96FN5 646 aa17.11■□□□□ 0.33
TRA2B-210ENST00000471134 ZBTB47Q9UFB7 747 aaPredicted RBP17.1■□□□□ 0.33
TRA2B-210ENST00000471134 PELP1Q8IZL8 1130 aaKnown RBP17.05■□□□□ 0.32
TRA2B-210ENST00000471134 MAP3K13O43283 966 aa17.03■□□□□ 0.32
TRA2B-210ENST00000471134 VASPP50552 380 aaPredicted RBP17.01■□□□□ 0.31
TRA2B-210ENST00000471134 ASTLQ6HA08 431 aaPredicted RBP17.01■□□□□ 0.31
TRA2B-210ENST00000471134 TRPC6Q9Y210 931 aa17■□□□□ 0.31
TRA2B-210ENST00000471134 ATMINO43313 823 aaPredicted RBP16.98■□□□□ 0.31
TRA2B-210ENST00000471134 FAM212AQ96EL1 285 aa16.93■□□□□ 0.3
TRA2B-210ENST00000471134 POTEB2H3BUK9 544 aa16.9■□□□□ 0.3
TRA2B-210ENST00000471134 BMP2KQ9NSY1 1161 aaPredicted RBP16.9■□□□□ 0.3
TRA2B-210ENST00000471134 ATN1P54259 1190 aaPredicted RBP16.89■□□□□ 0.29
TRA2B-210ENST00000471134 METRNQ9UJH8 293 aa16.85■□□□□ 0.29
TRA2B-210ENST00000471134 PCDHB13Q9Y5F0 798 aa16.85■□□□□ 0.29
TRA2B-210ENST00000471134 KLHL34Q8N239 644 aa16.83■□□□□ 0.28
TRA2B-210ENST00000471134 TIE1P35590 1138 aa16.82■□□□□ 0.28
TRA2B-210ENST00000471134 DCAF8Q5TAQ9 597 aa16.81■□□□□ 0.28
TRA2B-210ENST00000471134 IFNL1Q8IU54 200 aa16.81■□□□□ 0.28
TRA2B-210ENST00000471134 SLC39A7Q92504 469 aa16.81■□□□□ 0.28
TRA2B-210ENST00000471134 SGIP1Q9BQI5 828 aa16.81■□□□□ 0.28
TRA2B-210ENST00000471134 TTLL13PA6NNM8 815 aa16.77■□□□□ 0.28
TRA2B-210ENST00000471134 C7P10643 843 aa16.77■□□□□ 0.28
TRA2B-210ENST00000471134 PYGBP11216 843 aa16.76■□□□□ 0.27
TRA2B-210ENST00000471134 IFNLR1Q8IU57 520 aaPredicted RBP16.76■□□□□ 0.27
TRA2B-210ENST00000471134 OTUD5Q96G74 571 aa16.75■□□□□ 0.27
TRA2B-210ENST00000471134 POTEFA5A3E0 1075 aa16.71■□□□□ 0.27
TRA2B-210ENST00000471134 POTEJP0CG39 1038 aa16.71■□□□□ 0.27
TRA2B-210ENST00000471134 TRIM35Q9UPQ4 493 aa16.66■□□□□ 0.26
TRA2B-210ENST00000471134 GSE1Q14687 1217 aa16.64■□□□□ 0.25
TRA2B-210ENST00000471134 TMEM106CQ9BVX2 250 aa16.63■□□□□ 0.25
TRA2B-210ENST00000471134 PCDHB8Q9UN66 801 aa16.63■□□□□ 0.25
TRA2B-210ENST00000471134 SPOCK2Q92563 424 aa16.61■□□□□ 0.25
TRA2B-210ENST00000471134 COLQQ9Y215 455 aaPredicted RBP16.6■□□□□ 0.25
TRA2B-210ENST00000471134 CHRM1P11229 460 aaPredicted RBP16.52■□□□□ 0.24
TRA2B-210ENST00000471134 IER5LQ5T953 404 aa16.52■□□□□ 0.24
TRA2B-210ENST00000471134 SEC24BO95487 1268 aa16.49■□□□□ 0.23
TRA2B-210ENST00000471134 CIZ1Q9ULV3 898 aaPredicted RBP16.48■□□□□ 0.23
TRA2B-210ENST00000471134 ZNF467Q7Z7K2 595 aaPredicted RBP16.46■□□□□ 0.23
TRA2B-210ENST00000471134 MAMSTRQ6ZN01 415 aa16.44■□□□□ 0.22
TRA2B-210ENST00000471134 IRX5P78411 483 aaPredicted RBP16.42■□□□□ 0.22
TRA2B-210ENST00000471134 SCUBE2Q9NQ36 999 aa16.39■□□□□ 0.21
TRA2B-210ENST00000471134 PLCG2P16885 1265 aa16.35■□□□□ 0.21
TRA2B-210ENST00000471134 PSEN1P49768 467 aa16.35■□□□□ 0.21
TRA2B-210ENST00000471134 PDAP1Q13442 181 aaKnown RBP16.29■□□□□ 0.2
TRA2B-210ENST00000471134 OCEL1Q9H607 264 aa16.29■□□□□ 0.2
TRA2B-210ENST00000471134 PDCD7Q8N8D1 485 aaKnown RBP16.24■□□□□ 0.19
TRA2B-210ENST00000471134 LCE2DQ5TA82 110 aaPredicted RBP16.23■□□□□ 0.19
TRA2B-210ENST00000471134 MKRN3Q13064 507 aaKnown RBP16.21■□□□□ 0.19
TRA2B-210ENST00000471134 TRIM41Q8WV44 630 aa16.21■□□□□ 0.19
TRA2B-210ENST00000471134 GOLGA2Q08379 1002 aa16.2■□□□□ 0.18
TRA2B-210ENST00000471134 RNF25Q96BH1 459 aaPredicted RBP16.17■□□□□ 0.18
TRA2B-210ENST00000471134 CABP2Q9NPB3 220 aa16.17■□□□□ 0.18
TRA2B-210ENST00000471134 POTEMA6NI47 508 aa16.15■□□□□ 0.18
TRA2B-210ENST00000471134 SLAIN1Q8ND83 568 aa16.14■□□□□ 0.17
TRA2B-210ENST00000471134 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.14■□□□□ 0.175e-8■■□□□ 13.7
TRA2B-210ENST00000471134 POTEGQ6S5H5 508 aa16.13■□□□□ 0.17
TRA2B-210ENST00000471134 ILDR1Q86SU0 546 aaPredicted RBP16.13■□□□□ 0.17
TRA2B-210ENST00000471134 FAM163AQ96GL9 167 aaPredicted RBP16.13■□□□□ 0.17
TRA2B-210ENST00000471134 RIOK3O14730 519 aaKnown RBP16.06■□□□□ 0.16
TRA2B-210ENST00000471134 DPY19L2Q6NUT2 758 aa16.06■□□□□ 0.16
TRA2B-210ENST00000471134 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.02■□□□□ 0.16
TRA2B-210ENST00000471134 EFCAB3Q8N7B9 438 aa16.01■□□□□ 0.15
TRA2B-210ENST00000471134 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16■□□□□ 0.15
TRA2B-210ENST00000471134 L3MBTL3Q96JM7 780 aaPredicted RBP16■□□□□ 0.15
TRA2B-210ENST00000471134 ZFP91Q96JP5 570 aaPredicted RBP16■□□□□ 0.15
TRA2B-210ENST00000471134 VGFO15240 615 aaPredicted RBP15.96■□□□□ 0.15
TRA2B-210ENST00000471134 C3orf67Q6ZVT6 689 aa15.95■□□□□ 0.14
TRA2B-210ENST00000471134 ST18O60284 1047 aa15.92■□□□□ 0.14
TRA2B-210ENST00000471134 PKD2Q13563 968 aa15.91■□□□□ 0.14
TRA2B-210ENST00000471134 ECM2O94769 699 aaPredicted RBP15.89■□□□□ 0.13
TRA2B-210ENST00000471134 BOLA1Q9Y3E2 137 aa15.89■□□□□ 0.13
TRA2B-210ENST00000471134 PLSCR2Q9NRY7 297 aa15.85■□□□□ 0.13
TRA2B-210ENST00000471134 MS4A4AQ96JQ5 239 aa15.84■□□□□ 0.13
TRA2B-210ENST00000471134 PHF8Q9UPP1 1060 aa15.83■□□□□ 0.12
TRA2B-210ENST00000471134 RGL2O15211 777 aa15.82■□□□□ 0.12
TRA2B-210ENST00000471134 TMEM121BQ9BXQ6 578 aaPredicted RBP15.82■□□□□ 0.12
TRA2B-210ENST00000471134 BCL11BQ9C0K0 894 aaPredicted RBP15.82■□□□□ 0.12
TRA2B-210ENST00000471134 SOX12O15370 315 aa15.81■□□□□ 0.12
TRA2B-210ENST00000471134 G3V3G9 751 aa15.79■□□□□ 0.12
TRA2B-210ENST00000471134 SNPHO15079 494 aa15.78■□□□□ 0.12
TRA2B-210ENST00000471134 PCDH10Q9P2E7 1040 aa15.78■□□□□ 0.12
TRA2B-210ENST00000471134 STK24Q9Y6E0 443 aa15.76■□□□□ 0.11
TRA2B-210ENST00000471134 MICALL2Q8IY33 904 aa15.74■□□□□ 0.11
TRA2B-210ENST00000471134 TAOK2Q9UL54 1235 aa15.73■□□□□ 0.11
TRA2B-210ENST00000471134 STK25O00506 426 aa15.72■□□□□ 0.11
TRA2B-210ENST00000471134 FBXO22Q8NEZ5 403 aa15.71■□□□□ 0.11
TRA2B-210ENST00000471134 MARVELD3Q96A59 401 aa15.7■□□□□ 0.1
TRA2B-210ENST00000471134 TMEM92Q6UXU6 159 aa15.69■□□□□ 0.1
TRA2B-210ENST00000471134 CDAN1Q8IWY9 1227 aa15.69■□□□□ 0.1
TRA2B-210ENST00000471134 MFRPQ9BY79 579 aa15.68■□□□□ 0.1
TRA2B-210ENST00000471134 HOXB3P14651 431 aaPredicted RBP15.66■□□□□ 0.1
TRA2B-210ENST00000471134 NLRP6P59044 892 aa15.65■□□□□ 0.1
TRA2B-210ENST00000471134 EMP3P54852 163 aa15.56■□□□□ 0.08
TRA2B-210ENST00000471134 POTEB3A0JP26 581 aa15.54■□□□□ 0.08
TRA2B-210ENST00000471134 POTEBQ6S5H4 581 aa15.54■□□□□ 0.08
TRA2B-210ENST00000471134 DOK7Q18PE1 504 aa15.49■□□□□ 0.07
TRA2B-210ENST00000471134 HS3ST6Q96QI5 342 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms