RNA–Protein interactions for RNA: ENST00000470017.1

PRDX6-203, Transcript of peroxiredoxin 6, humanhuman

TSL 2

Gene PRDX6, Length 859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDX6-203ENST00000470017 CCDC88BA6NC98 1476 aa13.11□□□□□ -0.31
PRDX6-203ENST00000470017 SSUH2Q9Y2M2 353 aa13.11□□□□□ -0.31
PRDX6-203ENST00000470017 PRDM2Q13029 1718 aa13.1□□□□□ -0.31
PRDX6-203ENST00000470017 PITPNM1O00562 1244 aa13.09□□□□□ -0.31
PRDX6-203ENST00000470017 FANCD2Q9BXW9 1451 aa13.06□□□□□ -0.32
PRDX6-203ENST00000470017 MRC2Q9UBG0 1479 aa13.06□□□□□ -0.32
PRDX6-203ENST00000470017 WDR62O43379 1518 aa13.06□□□□□ -0.32
PRDX6-203ENST00000470017 CEP164Q9UPV0 1460 aa13.04□□□□□ -0.32
PRDX6-203ENST00000470017 SPDYE1Q8NFV5 336 aaPredicted RBP13.01□□□□□ -0.33
PRDX6-203ENST00000470017 URB2Q14146 1524 aaKnown RBP13□□□□□ -0.33
PRDX6-203ENST00000470017 PIP4P2Q8N4L2 257 aa12.97□□□□□ -0.33
PRDX6-203ENST00000470017 FXR2P51116 673 aaKnown RBP eCLIP12.95□□□□□ -0.34
PRDX6-203ENST00000470017 CLEC11AQ9Y240 323 aa12.93□□□□□ -0.34
PRDX6-203ENST00000470017 ABCC8Q09428 1581 aa12.9□□□□□ -0.35
PRDX6-203ENST00000470017 DNAJC5Q9H3Z4 198 aa12.89□□□□□ -0.35
PRDX6-203ENST00000470017 TOPBP1Q92547 1522 aa12.87□□□□□ -0.35
PRDX6-203ENST00000470017 DNMBPQ6XZF7 1577 aa12.85□□□□□ -0.35
PRDX6-203ENST00000470017 TRIM41Q8WV44 630 aa12.84□□□□□ -0.35
PRDX6-203ENST00000470017 SPDYE4A6NLX3 237 aa12.83□□□□□ -0.36
PRDX6-203ENST00000470017 ZNF608Q9ULD9 1512 aaPredicted RBP12.79□□□□□ -0.36
PRDX6-203ENST00000470017 TARBP1Q13395 1621 aaKnown RBP12.79□□□□□ -0.36
PRDX6-203ENST00000470017 PRR29P0C7W0 189 aa12.77□□□□□ -0.37
PRDX6-203ENST00000470017 IFT140Q96RY7 1462 aa12.77□□□□□ -0.37
PRDX6-203ENST00000470017 CUX1P39880 1505 aa12.77□□□□□ -0.37
PRDX6-203ENST00000470017 PRKAR2AP13861 404 aaKnown RBP12.76□□□□□ -0.37
PRDX6-203ENST00000470017 POLA1P09884 1462 aaPredicted RBP12.76□□□□□ -0.37
PRDX6-203ENST00000470017 SYNJ1O43426 1573 aa12.75□□□□□ -0.37
PRDX6-203ENST00000470017 BIVM-ERCC5R4GMW8 1640 aa12.74□□□□□ -0.37
PRDX6-203ENST00000470017 EIF4G3O43432 1585 aaKnown RBP12.74□□□□□ -0.37
PRDX6-203ENST00000470017 WRNQ14191 1432 aaPredicted RBP eCLIP12.74□□□□□ -0.37
PRDX6-203ENST00000470017 RAD54L2Q9Y4B4 1467 aa12.71□□□□□ -0.38
PRDX6-203ENST00000470017 STAG3Q9UJ98 1225 aa12.7□□□□□ -0.38
PRDX6-203ENST00000470017 FGD5Q6ZNL6 1462 aa12.7□□□□□ -0.38
PRDX6-203ENST00000470017 WDR97A6NE52 1622 aa12.7□□□□□ -0.38
PRDX6-203ENST00000470017 TOP2BQ02880 1626 aa12.7□□□□□ -0.38
PRDX6-203ENST00000470017 HAX1O00165 279 aa12.69□□□□□ -0.38
PRDX6-203ENST00000470017 AQRO60306 1485 aaKnown RBP eCLIP12.66□□□□□ -0.381e-9■■■■□ 23.2
PRDX6-203ENST00000470017 FAM9AQ8IZU1 332 aaPredicted RBP12.65□□□□□ -0.38
PRDX6-203ENST00000470017 SOGA1O94964 1423 aa12.64□□□□□ -0.39
PRDX6-203ENST00000470017 SP7Q8TDD2 431 aaPredicted RBP12.63□□□□□ -0.39
PRDX6-203ENST00000470017 CHD1O14646 1710 aa12.62□□□□□ -0.39
PRDX6-203ENST00000470017 CHADLQ6NUI6 762 aa12.62□□□□□ -0.39
PRDX6-203ENST00000470017 TDRD9Q8NDG6 1382 aaKnown RBP12.6□□□□□ -0.39
PRDX6-203ENST00000470017 ABCA5Q8WWZ7 1642 aa12.59□□□□□ -0.39
PRDX6-203ENST00000470017 PBRM1Q86U86 1689 aa12.57□□□□□ -0.4
PRDX6-203ENST00000470017 ABCA10Q8WWZ4 1543 aa12.57□□□□□ -0.4
PRDX6-203ENST00000470017 SLC24A1O60721 1099 aa12.56□□□□□ -0.4
PRDX6-203ENST00000470017 PROM2Q8N271 834 aa12.55□□□□□ -0.4
PRDX6-203ENST00000470017 SNAPC4Q5SXM2 1469 aa12.54□□□□□ -0.4
PRDX6-203ENST00000470017 RUSC2Q8N2Y8 1516 aa12.54□□□□□ -0.4
PRDX6-203ENST00000470017 LOC105371045A0A1W2PR82 267 aa12.52□□□□□ -0.41
PRDX6-203ENST00000470017 C19orf67A6NJJ6 358 aa12.52□□□□□ -0.41
PRDX6-203ENST00000470017 GRIN2BQ13224 1484 aa12.52□□□□□ -0.41
PRDX6-203ENST00000470017 FARP1Q9Y4F1 1045 aaPredicted RBP12.51□□□□□ -0.41
PRDX6-203ENST00000470017 GAPVD1Q14C86 1478 aa12.51□□□□□ -0.41
PRDX6-203ENST00000470017 RIMBP3CA6NJZ7 1639 aa12.51□□□□□ -0.41
PRDX6-203ENST00000470017 RIMBP3BA6NNM3 1639 aa12.51□□□□□ -0.41
PRDX6-203ENST00000470017 RIMBP3Q9UFD9 1639 aa12.51□□□□□ -0.41
PRDX6-203ENST00000470017 EEA1Q15075 1411 aa12.5□□□□□ -0.41
PRDX6-203ENST00000470017 MAGI1Q96QZ7 1491 aaPredicted RBP12.5□□□□□ -0.41
PRDX6-203ENST00000470017 CLASP1Q7Z460 1538 aa12.47□□□□□ -0.41
PRDX6-203ENST00000470017 EVX2Q03828 476 aa12.47□□□□□ -0.41
PRDX6-203ENST00000470017 CREBZFQ9NS37 354 aa12.47□□□□□ -0.41
PRDX6-203ENST00000470017 ARHGEF11O15085 1522 aa12.46□□□□□ -0.42
PRDX6-203ENST00000470017 SYNJ2O15056 1496 aa12.46□□□□□ -0.42
PRDX6-203ENST00000470017 ADAMTS12P58397 1594 aa12.45□□□□□ -0.42
PRDX6-203ENST00000470017 KIF21BO75037 1637 aa12.43□□□□□ -0.42
PRDX6-203ENST00000470017 KIF27Q86VH2 1401 aa12.43□□□□□ -0.42
PRDX6-203ENST00000470017 ERICH3Q5RHP9 1530 aa12.41□□□□□ -0.42
PRDX6-203ENST00000470017 FKBP8Q14318 412 aa12.39□□□□□ -0.43
PRDX6-203ENST00000470017 CD44P16070 742 aaKnown RBP12.38□□□□□ -0.43
PRDX6-203ENST00000470017 GRIN2AQ12879 1464 aa12.38□□□□□ -0.43
PRDX6-203ENST00000470017 ARAP1Q96P48 1450 aa12.38□□□□□ -0.43
PRDX6-203ENST00000470017 CEP170Q5SW79 1584 aa12.38□□□□□ -0.43
PRDX6-203ENST00000470017 AMER1Q5JTC6 1135 aaPredicted RBP12.37□□□□□ -0.43
PRDX6-203ENST00000470017 CHMP7Q8WUX9 453 aaPredicted RBP12.37□□□□□ -0.43
PRDX6-203ENST00000470017 RTN4Q9NQC3 1192 aaKnown RBP12.37□□□□□ -0.43
PRDX6-203ENST00000470017 GOLGA3Q08378 1498 aa12.37□□□□□ -0.43
PRDX6-203ENST00000470017 FHAD1B1AJZ9 1412 aa12.35□□□□□ -0.43
PRDX6-203ENST00000470017 NUP160Q12769 1436 aa12.35□□□□□ -0.43
PRDX6-203ENST00000470017 CUL7Q14999 1698 aa12.34□□□□□ -0.43
PRDX6-203ENST00000470017 UBTFP17480 764 aaKnown RBP12.33□□□□□ -0.44
PRDX6-203ENST00000470017 ERCC6L2Q5T890 1561 aa12.32□□□□□ -0.44
PRDX6-203ENST00000470017 NPM1P06748 294 aaKnown RBP eCLIP12.32□□□□□ -0.44
PRDX6-203ENST00000470017 SHROOM2Q13796 1616 aa12.31□□□□□ -0.44
PRDX6-203ENST00000470017 RAPGEF2Q9Y4G8 1499 aa12.31□□□□□ -0.44
PRDX6-203ENST00000470017 CTTNBP2Q8WZ74 1663 aa12.3□□□□□ -0.44
PRDX6-203ENST00000470017 IGF1RP08069 1367 aa12.3□□□□□ -0.44
PRDX6-203ENST00000470017 PRXQ9BXM0 1461 aa12.27□□□□□ -0.44
PRDX6-203ENST00000470017 GABBR2O75899 941 aa12.27□□□□□ -0.45
PRDX6-203ENST00000470017 PLEKHG5O94827 1062 aa12.27□□□□□ -0.45
PRDX6-203ENST00000470017 MNX1P50219 401 aaPredicted RBP12.27□□□□□ -0.45
PRDX6-203ENST00000470017 CLCN6P51797 869 aa12.26□□□□□ -0.45
PRDX6-203ENST00000470017 CYB5RLQ6IPT4 315 aa12.26□□□□□ -0.45
PRDX6-203ENST00000470017 TNIKQ9UKE5 1360 aa12.26□□□□□ -0.45
PRDX6-203ENST00000470017 CARMIL1Q5VZK9 1371 aa12.25□□□□□ -0.45
PRDX6-203ENST00000470017 PAK3O75914 559 aaPredicted RBP12.24□□□□□ -0.45
PRDX6-203ENST00000470017 ZRANB1Q9UGI0 708 aa12.23□□□□□ -0.45
PRDX6-203ENST00000470017 CEP162Q5TB80 1403 aa12.22□□□□□ -0.45
PRDX6-203ENST00000470017 RANGAP1P46060 587 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms