RNA–Protein interactions for RNA: ENST00000469862.1

CENPF-204, Transcript of centromere protein F, humanhuman

TSL 2

Gene CENPF, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPF-204ENST00000469862 MAMSTRQ6ZN01 415 aa15.88■□□□□ 0.13
CENPF-204ENST00000469862 MS4A3Q96HJ5 214 aa15.88■□□□□ 0.13
CENPF-204ENST00000469862 METRNQ9UJH8 293 aa15.88■□□□□ 0.13
CENPF-204ENST00000469862 ATMINO43313 823 aaPredicted RBP15.86■□□□□ 0.13
CENPF-204ENST00000469862 PROM2Q8N271 834 aa15.83■□□□□ 0.12
CENPF-204ENST00000469862 POTEMA6NI47 508 aa15.82■□□□□ 0.12
CENPF-204ENST00000469862 PLEKHG5O94827 1062 aa15.8■□□□□ 0.12
CENPF-204ENST00000469862 TSPYL2Q9H2G4 693 aaPredicted RBP15.8■□□□□ 0.12
CENPF-204ENST00000469862 PCDH10Q9P2E7 1040 aa15.78■□□□□ 0.12
CENPF-204ENST00000469862 POTEGQ6S5H5 508 aa15.77■□□□□ 0.12
CENPF-204ENST00000469862 CCDC61Q9Y6R9 512 aa15.76■□□□□ 0.11
CENPF-204ENST00000469862 SCUBE2Q9NQ36 999 aa15.71■□□□□ 0.11
CENPF-204ENST00000469862 KIF12Q96FN5 646 aa15.7■□□□□ 0.1
CENPF-204ENST00000469862 ATN1P54259 1190 aaPredicted RBP15.67■□□□□ 0.1
CENPF-204ENST00000469862 POTEJP0CG39 1038 aa15.65■□□□□ 0.1
CENPF-204ENST00000469862 MIER1Q8N108 512 aa15.63■□□□□ 0.09
CENPF-204ENST00000469862 TIE1P35590 1138 aa15.62■□□□□ 0.09
CENPF-204ENST00000469862 BMP2KQ9NSY1 1161 aaPredicted RBP15.59■□□□□ 0.09
CENPF-204ENST00000469862 MAP3K13O43283 966 aa15.56■□□□□ 0.08
CENPF-204ENST00000469862 FAM163AQ96GL9 167 aaPredicted RBP15.53■□□□□ 0.08
CENPF-204ENST00000469862 SGIP1Q9BQI5 828 aa15.52■□□□□ 0.08
CENPF-204ENST00000469862 RASEFQ8IZ41 740 aa15.51■□□□□ 0.07
CENPF-204ENST00000469862 ZBTB47Q9UFB7 747 aaPredicted RBP15.51■□□□□ 0.07
CENPF-204ENST00000469862 SEC24BO95487 1268 aa15.5■□□□□ 0.07
CENPF-204ENST00000469862 PLCD3Q8N3E9 789 aa15.47■□□□□ 0.07
CENPF-204ENST00000469862 POTEFA5A3E0 1075 aa15.46■□□□□ 0.07
CENPF-204ENST00000469862 IER5LQ5T953 404 aa15.46■□□□□ 0.07
CENPF-204ENST00000469862 TRPC6Q9Y210 931 aa15.46■□□□□ 0.07
CENPF-204ENST00000469862 TTLL13PA6NNM8 815 aa15.45■□□□□ 0.06
CENPF-204ENST00000469862 LCE2DQ5TA82 110 aaPredicted RBP15.42■□□□□ 0.06
CENPF-204ENST00000469862 PCDHB13Q9Y5F0 798 aa15.4■□□□□ 0.06
CENPF-204ENST00000469862 COLQQ9Y215 455 aaPredicted RBP15.37■□□□□ 0.05
CENPF-204ENST00000469862 TRIM35Q9UPQ4 493 aa15.36■□□□□ 0.05
CENPF-204ENST00000469862 FAM212AQ96EL1 285 aa15.31■□□□□ 0.04
CENPF-204ENST00000469862 NUBP1P53384 320 aa15.3■□□□□ 0.04
CENPF-204ENST00000469862 IFNL1Q8IU54 200 aa15.25■□□□□ 0.03
CENPF-204ENST00000469862 TMEM106CQ9BVX2 250 aa15.24■□□□□ 0.03
CENPF-204ENST00000469862 PLCG2P16885 1265 aa15.23■□□□□ 0.03
CENPF-204ENST00000469862 SLAIN1Q8ND83 568 aa15.21■□□□□ 0.03
CENPF-204ENST00000469862 CDAN1Q8IWY9 1227 aa15.2■□□□□ 0.02
CENPF-204ENST00000469862 IRX5P78411 483 aaPredicted RBP15.11■□□□□ 0.01
CENPF-204ENST00000469862 ST18O60284 1047 aa15.1■□□□□ 0.01
CENPF-204ENST00000469862 OCEL1Q9H607 264 aa15.1■□□□□ 0.01
CENPF-204ENST00000469862 SNPHO15079 494 aa15.08■□□□□ 0
CENPF-204ENST00000469862 DCAF8Q5TAQ9 597 aa15.08■□□□□ 0
CENPF-204ENST00000469862 TMEM121BQ9BXQ6 578 aaPredicted RBP15.07■□□□□ 0
CENPF-204ENST00000469862 FBXO3Q9UK99 471 aa15.03■□□□□ -0
CENPF-204ENST00000469862 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.02■□□□□ -0
CENPF-204ENST00000469862 FKBP8Q14318 412 aa15.01□□□□□ -0.01
CENPF-204ENST00000469862 PYGBP11216 843 aa15□□□□□ -0.01
CENPF-204ENST00000469862 PCDHB8Q9UN66 801 aa14.92□□□□□ -0.02
CENPF-204ENST00000469862 GSE1Q14687 1217 aa14.91□□□□□ -0.02
CENPF-204ENST00000469862 ZNF467Q7Z7K2 595 aaPredicted RBP14.91□□□□□ -0.02
CENPF-204ENST00000469862 GOLGA2Q08379 1002 aa14.89□□□□□ -0.03
CENPF-204ENST00000469862 L3MBTL3Q96JM7 780 aaPredicted RBP14.88□□□□□ -0.03
CENPF-204ENST00000469862 MKRN3Q13064 507 aaKnown RBP14.86□□□□□ -0.03
CENPF-204ENST00000469862 C3orf67Q6ZVT6 689 aa14.85□□□□□ -0.03
CENPF-204ENST00000469862 SPNS2Q8IVW8 549 aa14.83□□□□□ -0.04
CENPF-204ENST00000469862 KLHL34Q8N239 644 aa14.82□□□□□ -0.04
CENPF-204ENST00000469862 CHRM1P11229 460 aaPredicted RBP14.81□□□□□ -0.04
CENPF-204ENST00000469862 MMRN1Q13201 1228 aa14.81□□□□□ -0.04
CENPF-204ENST00000469862 PDCD7Q8N8D1 485 aaKnown RBP14.8□□□□□ -0.04
CENPF-204ENST00000469862 MARVELD3Q96A59 401 aa14.78□□□□□ -0.04
CENPF-204ENST00000469862 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.74□□□□□ -0.057e-8■■■■■ 28.1
CENPF-204ENST00000469862 EMP3P54852 163 aa14.73□□□□□ -0.05
CENPF-204ENST00000469862 VASPP50552 380 aaPredicted RBP14.72□□□□□ -0.05
CENPF-204ENST00000469862 PSEN1P49768 467 aa14.71□□□□□ -0.05
CENPF-204ENST00000469862 PDAP1Q13442 181 aaKnown RBP14.65□□□□□ -0.06
CENPF-204ENST00000469862 G3V3G9 751 aa14.63□□□□□ -0.07
CENPF-204ENST00000469862 ILDR1Q86SU0 546 aaPredicted RBP14.63□□□□□ -0.07
CENPF-204ENST00000469862 HS3ST6Q96QI5 342 aa14.6□□□□□ -0.07
CENPF-204ENST00000469862 FAM205CA6NFA0 338 aa14.58□□□□□ -0.08
CENPF-204ENST00000469862 BOLA1Q9Y3E2 137 aa14.54□□□□□ -0.08
CENPF-204ENST00000469862 KRTAP3-3Q9BYR6 98 aa14.52□□□□□ -0.09
CENPF-204ENST00000469862 KRTAP3-2Q9BYR7 98 aa14.52□□□□□ -0.09
CENPF-204ENST00000469862 SPOCK2Q92563 424 aa14.51□□□□□ -0.09
CENPF-204ENST00000469862 CABP2Q9NPB3 220 aa14.51□□□□□ -0.09
CENPF-204ENST00000469862 ZNF710Q8N1W2 664 aa14.49□□□□□ -0.09
CENPF-204ENST00000469862 POTEB3A0JP26 581 aa14.48□□□□□ -0.09
CENPF-204ENST00000469862 DPY19L2Q6NUT2 758 aa14.48□□□□□ -0.09
CENPF-204ENST00000469862 POTEBQ6S5H4 581 aa14.48□□□□□ -0.09
CENPF-204ENST00000469862 CIZ1Q9ULV3 898 aaPredicted RBP14.47□□□□□ -0.09
CENPF-204ENST00000469862 DOK7Q18PE1 504 aa14.46□□□□□ -0.09
CENPF-204ENST00000469862 HOXB1P14653 301 aaPredicted RBP14.44□□□□□ -0.1
CENPF-204ENST00000469862 HOXB3P14651 431 aaPredicted RBP14.43□□□□□ -0.1
CENPF-204ENST00000469862 RIMBP2O15034 1052 aa14.42□□□□□ -0.1
CENPF-204ENST00000469862 TRIM41Q8WV44 630 aa14.4□□□□□ -0.1
CENPF-204ENST00000469862 ERBB3P21860 1342 aa14.38□□□□□ -0.11
CENPF-204ENST00000469862 IFNLR1Q8IU57 520 aaPredicted RBP14.36□□□□□ -0.11
CENPF-204ENST00000469862 ZSWIM6Q9HCJ5 1215 aa14.31□□□□□ -0.12
CENPF-204ENST00000469862 CCDC180Q9P1Z9 1646 aa14.3□□□□□ -0.12
CENPF-204ENST00000469862 EFCAB3Q8N7B9 438 aa14.28□□□□□ -0.12
CENPF-204ENST00000469862 RNF166Q96A37 237 aaPredicted RBP14.24□□□□□ -0.13
CENPF-204ENST00000469862 SOX12O15370 315 aa14.23□□□□□ -0.13
CENPF-204ENST00000469862 VARS2Q5ST30 1063 aaKnown RBP14.23□□□□□ -0.13
CENPF-204ENST00000469862 MICALL2Q8IY33 904 aa14.2□□□□□ -0.14
CENPF-204ENST00000469862 PTGER2P43116 358 aa14.19□□□□□ -0.14
CENPF-204ENST00000469862 ZNF687Q8N1G0 1237 aa14.19□□□□□ -0.14
CENPF-204ENST00000469862 MYT1LQ9UL68 1186 aa14.19□□□□□ -0.14
CENPF-204ENST00000469862 ABCC9O60706 1549 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms