RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 C7P10643 843 aa15.39■□□□□ 0.05
VPS8-219ENST00000469479 ASTLQ6HA08 431 aaPredicted RBP15.38■□□□□ 0.05
VPS8-219ENST00000469479 MAMSTRQ6ZN01 415 aa15.38■□□□□ 0.05
VPS8-219ENST00000469479 ATMINO43313 823 aaPredicted RBP15.35■□□□□ 0.05
VPS8-219ENST00000469479 MNX1P50219 401 aaPredicted RBP15.34■□□□□ 0.05
VPS8-219ENST00000469479 MS4A3Q96HJ5 214 aa15.34■□□□□ 0.05
VPS8-219ENST00000469479 POTEJP0CG39 1038 aa15.3■□□□□ 0.04
VPS8-219ENST00000469479 FAM163AQ96GL9 167 aaPredicted RBP15.27■□□□□ 0.04
VPS8-219ENST00000469479 PROM2Q8N271 834 aa15.25■□□□□ 0.03
VPS8-219ENST00000469479 SCUBE2Q9NQ36 999 aa15.25■□□□□ 0.03
VPS8-219ENST00000469479 TSPYL2Q9H2G4 693 aaPredicted RBP15.18■□□□□ 0.02
VPS8-219ENST00000469479 LCE2DQ5TA82 110 aaPredicted RBP15.17■□□□□ 0.02
VPS8-219ENST00000469479 ATN1P54259 1190 aaPredicted RBP15.16■□□□□ 0.02
VPS8-219ENST00000469479 CCDC61Q9Y6R9 512 aa15.09■□□□□ 0.01
VPS8-219ENST00000469479 PLEKHG5O94827 1062 aa15.08■□□□□ 0
VPS8-219ENST00000469479 KIF12Q96FN5 646 aa15.06■□□□□ 0
VPS8-219ENST00000469479 BMP2KQ9NSY1 1161 aaPredicted RBP15.04■□□□□ -0
VPS8-219ENST00000469479 POTEFA5A3E0 1075 aa15.02■□□□□ -0
VPS8-219ENST00000469479 MIER1Q8N108 512 aa15□□□□□ -0.01
VPS8-219ENST00000469479 SEC24BO95487 1268 aa14.97□□□□□ -0.01
VPS8-219ENST00000469479 TIE1P35590 1138 aa14.97□□□□□ -0.01
VPS8-219ENST00000469479 TRPC6Q9Y210 931 aa14.96□□□□□ -0.01
VPS8-219ENST00000469479 MAP3K13O43283 966 aa14.94□□□□□ -0.02
VPS8-219ENST00000469479 CDAN1Q8IWY9 1227 aa14.94□□□□□ -0.02
VPS8-219ENST00000469479 COLQQ9Y215 455 aaPredicted RBP14.9□□□□□ -0.02
VPS8-219ENST00000469479 TTLL13PA6NNM8 815 aa14.86□□□□□ -0.03
VPS8-219ENST00000469479 PLCD3Q8N3E9 789 aa14.86□□□□□ -0.03
VPS8-219ENST00000469479 RASEFQ8IZ41 740 aa14.85□□□□□ -0.03
VPS8-219ENST00000469479 ZBTB47Q9UFB7 747 aaPredicted RBP14.83□□□□□ -0.04
VPS8-219ENST00000469479 IER5LQ5T953 404 aa14.81□□□□□ -0.04
VPS8-219ENST00000469479 TRIM35Q9UPQ4 493 aa14.79□□□□□ -0.04
VPS8-219ENST00000469479 SLAIN1Q8ND83 568 aa14.78□□□□□ -0.04
VPS8-219ENST00000469479 SGIP1Q9BQI5 828 aa14.76□□□□□ -0.05
VPS8-219ENST00000469479 ST18O60284 1047 aa14.74□□□□□ -0.05
VPS8-219ENST00000469479 PCDHB13Q9Y5F0 798 aa14.72□□□□□ -0.05
VPS8-219ENST00000469479 NUBP1P53384 320 aa14.69□□□□□ -0.06
VPS8-219ENST00000469479 PLCG2P16885 1265 aa14.64□□□□□ -0.07
VPS8-219ENST00000469479 FKBP8Q14318 412 aa14.64□□□□□ -0.07
VPS8-219ENST00000469479 FAM212AQ96EL1 285 aa14.64□□□□□ -0.07
VPS8-219ENST00000469479 MMRN1Q13201 1228 aa14.61□□□□□ -0.07
VPS8-219ENST00000469479 TMEM106CQ9BVX2 250 aa14.6□□□□□ -0.07
VPS8-219ENST00000469479 IFNL1Q8IU54 200 aa14.59□□□□□ -0.07
VPS8-219ENST00000469479 SPNS2Q8IVW8 549 aa14.58□□□□□ -0.08
VPS8-219ENST00000469479 TMEM121BQ9BXQ6 578 aaPredicted RBP14.57□□□□□ -0.08
VPS8-219ENST00000469479 SNPHO15079 494 aa14.53□□□□□ -0.08
VPS8-219ENST00000469479 IRX5P78411 483 aaPredicted RBP14.52□□□□□ -0.09
VPS8-219ENST00000469479 FBXO3Q9UK99 471 aa14.52□□□□□ -0.09
VPS8-219ENST00000469479 OCEL1Q9H607 264 aa14.48□□□□□ -0.09
VPS8-219ENST00000469479 DCAF8Q5TAQ9 597 aa14.47□□□□□ -0.09
VPS8-219ENST00000469479 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.47□□□□□ -0.09
VPS8-219ENST00000469479 MARVELD3Q96A59 401 aa14.45□□□□□ -0.1
VPS8-219ENST00000469479 PYGBP11216 843 aa14.39□□□□□ -0.11
VPS8-219ENST00000469479 GSE1Q14687 1217 aa14.31□□□□□ -0.12
VPS8-219ENST00000469479 PCDHB8Q9UN66 801 aa14.31□□□□□ -0.12
VPS8-219ENST00000469479 EMP3P54852 163 aa14.3□□□□□ -0.12
VPS8-219ENST00000469479 KLHL34Q8N239 644 aa14.3□□□□□ -0.12
VPS8-219ENST00000469479 VASPP50552 380 aaPredicted RBP14.27□□□□□ -0.13
VPS8-219ENST00000469479 C3orf67Q6ZVT6 689 aa14.27□□□□□ -0.13
VPS8-219ENST00000469479 ZNF467Q7Z7K2 595 aaPredicted RBP14.26□□□□□ -0.13
VPS8-219ENST00000469479 CHRM1P11229 460 aaPredicted RBP14.22□□□□□ -0.13
VPS8-219ENST00000469479 L3MBTL3Q96JM7 780 aaPredicted RBP14.22□□□□□ -0.13
VPS8-219ENST00000469479 HS3ST6Q96QI5 342 aa14.21□□□□□ -0.13
VPS8-219ENST00000469479 FAM205CA6NFA0 338 aa14.19□□□□□ -0.14
VPS8-219ENST00000469479 GOLGA2Q08379 1002 aa14.19□□□□□ -0.14
VPS8-219ENST00000469479 KRTAP3-3Q9BYR6 98 aa14.18□□□□□ -0.14
VPS8-219ENST00000469479 KRTAP3-2Q9BYR7 98 aa14.18□□□□□ -0.14
VPS8-219ENST00000469479 MKRN3Q13064 507 aaKnown RBP14.17□□□□□ -0.14
VPS8-219ENST00000469479 PDCD7Q8N8D1 485 aaKnown RBP14.17□□□□□ -0.14
VPS8-219ENST00000469479 POTEB3A0JP26 581 aa14.14□□□□□ -0.15
VPS8-219ENST00000469479 POTEBQ6S5H4 581 aa14.14□□□□□ -0.15
VPS8-219ENST00000469479 PSEN1P49768 467 aa14.1□□□□□ -0.15
VPS8-219ENST00000469479 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.09□□□□□ -0.153e-9■□□□□ 9
VPS8-219ENST00000469479 PDAP1Q13442 181 aaKnown RBP14.04□□□□□ -0.16
VPS8-219ENST00000469479 SPOCK2Q92563 424 aa14.03□□□□□ -0.16
VPS8-219ENST00000469479 CIZ1Q9ULV3 898 aaPredicted RBP13.98□□□□□ -0.17
VPS8-219ENST00000469479 ILDR1Q86SU0 546 aaPredicted RBP13.97□□□□□ -0.17
VPS8-219ENST00000469479 IFNLR1Q8IU57 520 aaPredicted RBP13.97□□□□□ -0.17
VPS8-219ENST00000469479 G3V3G9 751 aa13.96□□□□□ -0.17
VPS8-219ENST00000469479 ZNF710Q8N1W2 664 aa13.94□□□□□ -0.18
VPS8-219ENST00000469479 ERBB3P21860 1342 aa13.91□□□□□ -0.18
VPS8-219ENST00000469479 HOXB1P14653 301 aaPredicted RBP13.91□□□□□ -0.18
VPS8-219ENST00000469479 RNF166Q96A37 237 aaPredicted RBP13.91□□□□□ -0.18
VPS8-219ENST00000469479 CABP2Q9NPB3 220 aa13.91□□□□□ -0.18
VPS8-219ENST00000469479 HOXB3P14651 431 aaPredicted RBP13.9□□□□□ -0.18
VPS8-219ENST00000469479 DPY19L2Q6NUT2 758 aa13.9□□□□□ -0.18
VPS8-219ENST00000469479 BOLA1Q9Y3E2 137 aa13.89□□□□□ -0.19
VPS8-219ENST00000469479 DOK7Q18PE1 504 aa13.86□□□□□ -0.19
VPS8-219ENST00000469479 TRIM41Q8WV44 630 aa13.86□□□□□ -0.19
VPS8-219ENST00000469479 MYT1LQ9UL68 1186 aa13.81□□□□□ -0.2
VPS8-219ENST00000469479 RIMBP2O15034 1052 aa13.8□□□□□ -0.2
VPS8-219ENST00000469479 VARS2Q5ST30 1063 aaKnown RBP13.78□□□□□ -0.2
VPS8-219ENST00000469479 EFCAB3Q8N7B9 438 aa13.71□□□□□ -0.21
VPS8-219ENST00000469479 ZNF687Q8N1G0 1237 aa13.69□□□□□ -0.22
VPS8-219ENST00000469479 PTGER2P43116 358 aa13.67□□□□□ -0.22
VPS8-219ENST00000469479 ZSWIM6Q9HCJ5 1215 aa13.66□□□□□ -0.22
VPS8-219ENST00000469479 SOX12O15370 315 aa13.64□□□□□ -0.23
VPS8-219ENST00000469479 RIOK3O14730 519 aaKnown RBP13.62□□□□□ -0.23
VPS8-219ENST00000469479 MICALL2Q8IY33 904 aa13.59□□□□□ -0.23
VPS8-219ENST00000469479 VGFO15240 615 aaPredicted RBP13.57□□□□□ -0.24
VPS8-219ENST00000469479 GPR153Q6NV75 609 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms