RNA–Protein interactions for RNA: ENST00000466058.1

KDM3A-209, Transcript of lysine demethylase 3A, humanhuman

TSL 4

Gene KDM3A, Length 448 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-209ENST00000466058 SNAPC4Q5SXM2 1469 aa11.13□□□□□ -0.63
KDM3A-209ENST00000466058 PRDM2Q13029 1718 aa11.12□□□□□ -0.63
KDM3A-209ENST00000466058 TSPOAP1O95153 1857 aa11.11□□□□□ -0.63
KDM3A-209ENST00000466058 EHMT2Q96KQ7 1210 aa11.11□□□□□ -0.63
KDM3A-209ENST00000466058 TDRD9Q8NDG6 1382 aaKnown RBP11.09□□□□□ -0.63
KDM3A-209ENST00000466058 RAD54L2Q9Y4B4 1467 aa11.05□□□□□ -0.64
KDM3A-209ENST00000466058 DNMBPQ6XZF7 1577 aa11.03□□□□□ -0.64
KDM3A-209ENST00000466058 ABCC10Q5T3U5 1492 aa11.02□□□□□ -0.65
KDM3A-209ENST00000466058 NPM3O75607 178 aaKnown RBP11.02□□□□□ -0.65
KDM3A-209ENST00000466058 ABCC8Q09428 1581 aa11.02□□□□□ -0.65
KDM3A-209ENST00000466058 POLA1P09884 1462 aaPredicted RBP11□□□□□ -0.65
KDM3A-209ENST00000466058 MAGI1Q96QZ7 1491 aaPredicted RBP10.99□□□□□ -0.65
KDM3A-209ENST00000466058 DIP2BQ9P265 1576 aa10.99□□□□□ -0.65
KDM3A-209ENST00000466058 SOGA1O94964 1423 aa10.96□□□□□ -0.65
KDM3A-209ENST00000466058 CEP170Q5SW79 1584 aa10.94□□□□□ -0.66
KDM3A-209ENST00000466058 NPM1P06748 294 aaKnown RBP eCLIP10.93□□□□□ -0.66
KDM3A-209ENST00000466058 SPATA31D1Q6ZQQ2 1576 aa10.93□□□□□ -0.66
KDM3A-209ENST00000466058 GRIN2BQ13224 1484 aa10.93□□□□□ -0.66
KDM3A-209ENST00000466058 PBRM1Q86U86 1689 aa10.89□□□□□ -0.67
KDM3A-209ENST00000466058 CACNB1Q02641 598 aaPredicted RBP10.88□□□□□ -0.67
KDM3A-209ENST00000466058 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.88□□□□□ -0.671e-7■□□□□ 9.9
KDM3A-209ENST00000466058 TOP2AP11388 1531 aaKnown RBP10.88□□□□□ -0.67
KDM3A-209ENST00000466058 SLC4A1APQ9BWU0 796 aaKnown RBP10.87□□□□□ -0.67
KDM3A-209ENST00000466058 MAPKBP1O60336 1514 aa10.87□□□□□ -0.67
KDM3A-209ENST00000466058 WDR97A6NE52 1622 aa10.85□□□□□ -0.67
KDM3A-209ENST00000466058 CERKQ8TCT0 537 aa10.84□□□□□ -0.67
KDM3A-209ENST00000466058 FGD5Q6ZNL6 1462 aa10.82□□□□□ -0.68
KDM3A-209ENST00000466058 RNF39Q9H2S5 420 aa10.82□□□□□ -0.68
KDM3A-209ENST00000466058 TOP2BQ02880 1626 aa10.82□□□□□ -0.68
KDM3A-209ENST00000466058 SHROOM2Q13796 1616 aa10.82□□□□□ -0.68
KDM3A-209ENST00000466058 COL17A1Q9UMD9 1497 aaPredicted RBP10.81□□□□□ -0.68
KDM3A-209ENST00000466058 CCDC88BA6NC98 1476 aa10.81□□□□□ -0.68
KDM3A-209ENST00000466058 PPRC1Q5VV67 1664 aaKnown RBP10.8□□□□□ -0.68
KDM3A-209ENST00000466058 C1QBPQ07021 282 aaKnown RBP10.8□□□□□ -0.68
KDM3A-209ENST00000466058 PRG4Q92954 1404 aaPredicted RBP10.8□□□□□ -0.68
KDM3A-209ENST00000466058 GRIN2AQ12879 1464 aa10.8□□□□□ -0.68
KDM3A-209ENST00000466058 ADCY10Q96PN6 1610 aa10.8□□□□□ -0.68
KDM3A-209ENST00000466058 CSRNP3Q8WYN3 585 aa10.79□□□□□ -0.68
KDM3A-209ENST00000466058 NUP160Q12769 1436 aa10.76□□□□□ -0.69
KDM3A-209ENST00000466058 JPH4Q96JJ6 628 aa10.72□□□□□ -0.69
KDM3A-209ENST00000466058 HSPA2P54652 639 aa10.7□□□□□ -0.7
KDM3A-209ENST00000466058 PCF11O94913 1555 aaKnown RBP10.69□□□□□ -0.7
KDM3A-209ENST00000466058 KIF21BO75037 1637 aa10.69□□□□□ -0.7
KDM3A-209ENST00000466058 ABCA5Q8WWZ7 1642 aa10.68□□□□□ -0.7
KDM3A-209ENST00000466058 ADAMTS12P58397 1594 aa10.68□□□□□ -0.7
KDM3A-209ENST00000466058 PTPRMP28827 1452 aa10.68□□□□□ -0.7
KDM3A-209ENST00000466058 TTBK1Q5TCY1 1321 aaPredicted RBP10.67□□□□□ -0.7
KDM3A-209ENST00000466058 CUX1P39880 1505 aa10.67□□□□□ -0.7
KDM3A-209ENST00000466058 GLI2P10070 1586 aa10.64□□□□□ -0.71
KDM3A-209ENST00000466058 ASXL2Q76L83 1435 aa10.62□□□□□ -0.71
KDM3A-209ENST00000466058 APLP2Q06481 763 aa10.61□□□□□ -0.71
KDM3A-209ENST00000466058 TEX14Q8IWB6 1497 aa10.6□□□□□ -0.71
KDM3A-209ENST00000466058 FHAD1B1AJZ9 1412 aa10.59□□□□□ -0.71
KDM3A-209ENST00000466058 ABCA10Q8WWZ4 1543 aa10.59□□□□□ -0.71
KDM3A-209ENST00000466058 ADAMTSL3P82987 1691 aa10.59□□□□□ -0.71
KDM3A-209ENST00000466058 MAP3K4Q9Y6R4 1608 aa10.58□□□□□ -0.72
KDM3A-209ENST00000466058 CUL7Q14999 1698 aa10.58□□□□□ -0.72
KDM3A-209ENST00000466058 PLB1Q6P1J6 1458 aa10.58□□□□□ -0.72
KDM3A-209ENST00000466058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.56□□□□□ -0.72
KDM3A-209ENST00000466058 HNRNPUL2Q1KMD3 747 aaKnown RBP10.56□□□□□ -0.72
KDM3A-209ENST00000466058 RUSC2Q8N2Y8 1516 aa10.54□□□□□ -0.72
KDM3A-209ENST00000466058 MADDQ8WXG6 1647 aa10.54□□□□□ -0.72
KDM3A-209ENST00000466058 EPRSP07814 1512 aaKnown RBP10.53□□□□□ -0.72
KDM3A-209ENST00000466058 ABCC2Q92887 1545 aa10.53□□□□□ -0.72
KDM3A-209ENST00000466058 RIMS1Q86UR5 1692 aaKnown RBP10.5□□□□□ -0.73
KDM3A-209ENST00000466058 ARID4BQ4LE39 1312 aaPredicted RBP10.5□□□□□ -0.73
KDM3A-209ENST00000466058 PTPRGP23470 1445 aa10.5□□□□□ -0.73
KDM3A-209ENST00000466058 BCORL1Q5H9F3 1711 aa10.49□□□□□ -0.73
KDM3A-209ENST00000466058 U3KPZ7 1027 aaPredicted RBP10.48□□□□□ -0.73
KDM3A-209ENST00000466058 KIAA0586Q9BVV6 1533 aa10.47□□□□□ -0.73
KDM3A-209ENST00000466058 ZBTB22O15209 634 aa10.46□□□□□ -0.73
KDM3A-209ENST00000466058 MED1Q15648 1581 aaPredicted RBP10.45□□□□□ -0.74
KDM3A-209ENST00000466058 ERICH3Q5RHP9 1530 aa10.43□□□□□ -0.74
KDM3A-209ENST00000466058 SAMD1Q6SPF0 538 aaPredicted RBP10.43□□□□□ -0.74
KDM3A-209ENST00000466058 CAPN15O75808 1086 aa10.42□□□□□ -0.74
KDM3A-209ENST00000466058 STRCQ7RTU9 1775 aa10.42□□□□□ -0.74
KDM3A-209ENST00000466058 CD109Q6YHK3 1445 aa10.41□□□□□ -0.74
KDM3A-209ENST00000466058 ZCCHC11Q5TAX3 1644 aaKnown RBP10.4□□□□□ -0.74
KDM3A-209ENST00000466058 UBAP1LF5GYI3 381 aa10.4□□□□□ -0.74
KDM3A-209ENST00000466058 SLC4A2P04920 1241 aa10.4□□□□□ -0.74
KDM3A-209ENST00000466058 KCNH8Q96L42 1107 aa10.4□□□□□ -0.74
KDM3A-209ENST00000466058 WRNQ14191 1432 aaPredicted RBP eCLIP10.39□□□□□ -0.75
KDM3A-209ENST00000466058 YEATS2Q9ULM3 1422 aa10.38□□□□□ -0.75
KDM3A-209ENST00000466058 TNIKQ9UKE5 1360 aa10.38□□□□□ -0.75
KDM3A-209ENST00000466058 MAGI3Q5TCQ9 1506 aa10.38□□□□□ -0.75
KDM3A-209ENST00000466058 UACAQ9BZF9 1416 aa10.37□□□□□ -0.75
KDM3A-209ENST00000466058 UHRF1BP1LA0JNW5 1464 aa10.36□□□□□ -0.75
KDM3A-209ENST00000466058 RAPGEF3O95398 923 aa10.36□□□□□ -0.75
KDM3A-209ENST00000466058 CFAP43Q8NDM7 1665 aa10.36□□□□□ -0.75
KDM3A-209ENST00000466058 LTBP4Q8N2S1 1624 aa10.36□□□□□ -0.75
KDM3A-209ENST00000466058 KDM5BQ9UGL1 1544 aa10.35□□□□□ -0.75
KDM3A-209ENST00000466058 MYCNP04198 464 aaPredicted RBP10.35□□□□□ -0.75
KDM3A-209ENST00000466058 ZNF219Q9P2Y4 722 aaPredicted RBP10.35□□□□□ -0.75
KDM3A-209ENST00000466058 WDR7Q9Y4E6 1490 aa10.34□□□□□ -0.75
KDM3A-209ENST00000466058 HSPA1LP34931 641 aa10.33□□□□□ -0.76
KDM3A-209ENST00000466058 MLECQ14165 292 aa10.32□□□□□ -0.76
KDM3A-209ENST00000466058 ARAP3Q8WWN8 1544 aa10.32□□□□□ -0.76
KDM3A-209ENST00000466058 CARMIL2Q6F5E8 1435 aa10.32□□□□□ -0.76
KDM3A-209ENST00000466058 PREX1Q8TCU6 1659 aa10.31□□□□□ -0.76
KDM3A-209ENST00000466058 IQSEC2Q5JU85 1478 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms