RNA–Protein interactions for RNA: ENST00000465261.6

LMO7-207, Transcript of LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene LMO7, Length 5,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-207ENST00000465261 TNIKQ9UKE5 1360 aa11□□□□□ -0.65
LMO7-207ENST00000465261 WDR43Q15061 677 aaKnown RBP eCLIP10.98□□□□□ -0.65
LMO7-207ENST00000465261 FKBP8Q14318 412 aa10.98□□□□□ -0.65
LMO7-207ENST00000465261 ANP32AP39687 249 aaKnown RBP10.97□□□□□ -0.65
LMO7-207ENST00000465261 EIF4G2P78344 907 aaKnown RBP eCLIP10.97□□□□□ -0.65
LMO7-207ENST00000465261 PPP1R15AO75807 674 aaPredicted RBP10.97□□□□□ -0.65
LMO7-207ENST00000465261 HIRIP3Q9BW71 556 aaPredicted RBP10.96□□□□□ -0.65
LMO7-207ENST00000465261 MRS2Q9HD23 443 aa10.96□□□□□ -0.65
LMO7-207ENST00000465261 SENP3Q9H4L4 574 aaPredicted RBP10.95□□□□□ -0.66
LMO7-207ENST00000465261 NPM2Q86SE8 214 aaKnown RBP10.94□□□□□ -0.66
LMO7-207ENST00000465261 RGL3Q3MIN7 710 aa10.94□□□□□ -0.66
LMO7-207ENST00000465261 SCAF1Q9H7N4 1312 aaKnown RBP10.93□□□□□ -0.66
LMO7-207ENST00000465261 ARID4BQ4LE39 1312 aaPredicted RBP10.92□□□□□ -0.66
LMO7-207ENST00000465261 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.92□□□□□ -0.66
LMO7-207ENST00000465261 CUX2O14529 1486 aa10.91□□□□□ -0.66
LMO7-207ENST00000465261 CARMIL1Q5VZK9 1371 aa10.91□□□□□ -0.66
LMO7-207ENST00000465261 EIF4G1Q04637 1599 aaKnown RBP10.89□□□□□ -0.67
LMO7-207ENST00000465261 UPF2Q9HAU5 1272 aaKnown RBP10.88□□□□□ -0.67
LMO7-207ENST00000465261 FHAD1B1AJZ9 1412 aa10.88□□□□□ -0.67
LMO7-207ENST00000465261 C14orf37Q86TY3 774 aa10.88□□□□□ -0.67
LMO7-207ENST00000465261 MIER1Q8N108 512 aa10.87□□□□□ -0.67
LMO7-207ENST00000465261 MROH2BQ7Z745 1585 aa10.87□□□□□ -0.67
LMO7-207ENST00000465261 CCDC136Q96JN2 1154 aa10.87□□□□□ -0.67
LMO7-207ENST00000465261 CCNB3Q8WWL7 1395 aa10.87□□□□□ -0.67
LMO7-207ENST00000465261 SOGA1O94964 1423 aa10.87□□□□□ -0.67
LMO7-207ENST00000465261 HSP90AA1P07900 732 aaKnown RBP10.86□□□□□ -0.67
LMO7-207ENST00000465261 ZBTB7CA1YPR0 619 aa10.86□□□□□ -0.67
LMO7-207ENST00000465261 CCDC88BA6NC98 1476 aa10.86□□□□□ -0.67
LMO7-207ENST00000465261 SMARCA2P51531 1590 aa10.86□□□□□ -0.67
LMO7-207ENST00000465261 PLEKHG5O94827 1062 aa10.85□□□□□ -0.67
LMO7-207ENST00000465261 CDCA8Q53HL2 280 aa10.85□□□□□ -0.67
LMO7-207ENST00000465261 CARD11Q9BXL7 1154 aa10.84□□□□□ -0.67
LMO7-207ENST00000465261 PDS5BQ9NTI5 1447 aa10.83□□□□□ -0.68
LMO7-207ENST00000465261 A0A0G2JS52 829 aa10.82□□□□□ -0.68
LMO7-207ENST00000465261 KNSTRNQ9Y448 316 aa10.82□□□□□ -0.68
LMO7-207ENST00000465261 CFAP53Q96M91 514 aa10.81□□□□□ -0.68
LMO7-207ENST00000465261 SIN3AQ96ST3 1273 aa10.8□□□□□ -0.68
LMO7-207ENST00000465261 MYH16Q9H6N6 1097 aa10.79□□□□□ -0.68
LMO7-207ENST00000465261 ABCC8Q09428 1581 aa10.79□□□□□ -0.68
LMO7-207ENST00000465261 IRX6P78412 446 aaPredicted RBP10.78□□□□□ -0.68
LMO7-207ENST00000465261 POGKQ9P215 609 aa10.77□□□□□ -0.68
LMO7-207ENST00000465261 PPM1GO15355 546 aaPredicted RBP10.77□□□□□ -0.69
LMO7-207ENST00000465261 HAP1P54257 671 aaPredicted RBP10.77□□□□□ -0.69
LMO7-207ENST00000465261 CARMIL2Q6F5E8 1435 aa10.76□□□□□ -0.69
LMO7-207ENST00000465261 TDRD9Q8NDG6 1382 aaKnown RBP10.76□□□□□ -0.69
LMO7-207ENST00000465261 KANK1Q14678 1352 aa10.76□□□□□ -0.69
LMO7-207ENST00000465261 TRHP20396 242 aaPredicted RBP10.74□□□□□ -0.69
LMO7-207ENST00000465261 ANP32BQ92688 251 aaKnown RBP10.74□□□□□ -0.69
LMO7-207ENST00000465261 VPS8Q8N3P4 1428 aa10.74□□□□□ -0.69
LMO7-207ENST00000465261 TOP2AP11388 1531 aaKnown RBP10.73□□□□□ -0.69
LMO7-207ENST00000465261 ARHGAP35Q9NRY4 1499 aa10.73□□□□□ -0.69
LMO7-207ENST00000465261 DCAF11Q8TEB1 546 aa10.73□□□□□ -0.69
LMO7-207ENST00000465261 MLECQ14165 292 aa10.72□□□□□ -0.69
LMO7-207ENST00000465261 SENP3-EIF4A1A0A087X0R7 540 aa10.72□□□□□ -0.69
LMO7-207ENST00000465261 WIZO95785 1651 aa10.72□□□□□ -0.69
LMO7-207ENST00000465261 CADPSQ9ULU8 1353 aa10.71□□□□□ -0.7
LMO7-207ENST00000465261 NUDCQ9Y266 331 aa10.71□□□□□ -0.7
LMO7-207ENST00000465261 LMOD2Q6P5Q4 547 aa10.7□□□□□ -0.7
LMO7-207ENST00000465261 MAPK8IP3Q9UPT6 1336 aa10.7□□□□□ -0.7
LMO7-207ENST00000465261 FMN1Q68DA7 1419 aa10.7□□□□□ -0.7
LMO7-207ENST00000465261 KANK4Q5T7N3 995 aaPredicted RBP10.69□□□□□ -0.7
LMO7-207ENST00000465261 NEUROD2Q15784 382 aa10.69□□□□□ -0.7
LMO7-207ENST00000465261 SETD5Q9C0A6 1442 aa10.69□□□□□ -0.7
LMO7-207ENST00000465261 HDGFP51858 240 aaKnown RBP10.69□□□□□ -0.7
LMO7-207ENST00000465261 TMF1P82094 1093 aa10.69□□□□□ -0.7
LMO7-207ENST00000465261 TNNT2P45379 298 aaPredicted RBP10.68□□□□□ -0.7
LMO7-207ENST00000465261 GGT6Q6P531 493 aa10.68□□□□□ -0.7
LMO7-207ENST00000465261 CC2D1BQ5T0F9 858 aaKnown RBP10.68□□□□□ -0.7
LMO7-207ENST00000465261 TIMELESSQ9UNS1 1208 aa10.67□□□□□ -0.7
LMO7-207ENST00000465261 LAS1LQ9Y4W2 734 aaKnown RBP10.66□□□□□ -0.7
LMO7-207ENST00000465261 PKD2Q13563 968 aa10.66□□□□□ -0.7
LMO7-207ENST00000465261 EFCAB2Q5VUJ9 269 aa10.66□□□□□ -0.7
LMO7-207ENST00000465261 ATAD2BQ9ULI0 1458 aa10.66□□□□□ -0.7
LMO7-207ENST00000465261 FTSJ3Q8IY81 847 aaKnown RBP10.65□□□□□ -0.7
LMO7-207ENST00000465261 ARXQ96QS3 562 aa10.65□□□□□ -0.7
LMO7-207ENST00000465261 RAPGEF2Q9Y4G8 1499 aa10.64□□□□□ -0.71
LMO7-207ENST00000465261 U2SURPO15042 1029 aaKnown RBP10.64□□□□□ -0.71
LMO7-207ENST00000465261 SRPK2P78362 688 aaKnown RBP10.64□□□□□ -0.71
LMO7-207ENST00000465261 SUPT16HQ9Y5B9 1047 aaKnown RBP10.63□□□□□ -0.71
LMO7-207ENST00000465261 FOXD1Q16676 465 aa10.62□□□□□ -0.71
LMO7-207ENST00000465261 SAFB2Q14151 953 aaKnown RBP eCLIP10.62□□□□□ -0.71
LMO7-207ENST00000465261 ANKRD30AQ9BXX3 1397 aa10.62□□□□□ -0.71
LMO7-207ENST00000465261 SMARCA4P51532 1647 aa10.61□□□□□ -0.71
LMO7-207ENST00000465261 NBR1Q14596 966 aa10.61□□□□□ -0.71
LMO7-207ENST00000465261 PNNQ9H307 717 aaKnown RBP10.61□□□□□ -0.71
LMO7-207ENST00000465261 NUP155O75694 1391 aa10.61□□□□□ -0.71
LMO7-207ENST00000465261 FHOD3Q2V2M9 1422 aa10.6□□□□□ -0.71
LMO7-207ENST00000465261 MPHOSPH9Q99550 1183 aa10.6□□□□□ -0.71
LMO7-207ENST00000465261 HSPA5P11021 654 aaKnown RBP10.59□□□□□ -0.71
LMO7-207ENST00000465261 BECN1Q14457 450 aa10.59□□□□□ -0.71
LMO7-207ENST00000465261 FRAT1Q92837 279 aaPredicted RBP10.59□□□□□ -0.71
LMO7-207ENST00000465261 STK26Q9P289 416 aa10.59□□□□□ -0.71
LMO7-207ENST00000465261 RAB3GAP2Q9H2M9 1393 aa10.59□□□□□ -0.71
LMO7-207ENST00000465261 MORC1Q86VD1 984 aa10.59□□□□□ -0.71
LMO7-207ENST00000465261 JPH4Q96JJ6 628 aa10.58□□□□□ -0.72
LMO7-207ENST00000465261 DDRGK1Q96HY6 314 aa10.58□□□□□ -0.72
LMO7-207ENST00000465261 SOX12O15370 315 aa10.58□□□□□ -0.72
LMO7-207ENST00000465261 HNRNPMP52272 730 aaKnown RBP eCLIP10.57□□□□□ -0.727e-6■□□□□ 9.7
LMO7-207ENST00000465261 FANCD2Q9BXW9 1451 aa10.57□□□□□ -0.72
LMO7-207ENST00000465261 CASC1Q6TDU7 716 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms