RNA–Protein interactions for RNA: ENST00000463058.5

HHLA3-204, Transcript of HERV-H LTR-associating 3, humanhuman

TSL 2

Gene HHLA3, Length 832 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-204ENST00000463058 CADPSQ9ULU8 1353 aa12.23□□□□□ -0.45
HHLA3-204ENST00000463058 ZNF692Q9BU19 519 aaPredicted RBP12.21□□□□□ -0.45
HHLA3-204ENST00000463058 SPDYE2BA6NHP3 402 aa12.19□□□□□ -0.46
HHLA3-204ENST00000463058 SPDYE6P0CI01 402 aa12.19□□□□□ -0.46
HHLA3-204ENST00000463058 SPDYE2Q495Y8 402 aa12.19□□□□□ -0.46
HHLA3-204ENST00000463058 TOP2AP11388 1531 aaKnown RBP12.18□□□□□ -0.46
HHLA3-204ENST00000463058 MRC2Q9UBG0 1479 aa12.17□□□□□ -0.46
HHLA3-204ENST00000463058 WDR62O43379 1518 aa12.13□□□□□ -0.47
HHLA3-204ENST00000463058 TRIM41Q8WV44 630 aa12.11□□□□□ -0.47
HHLA3-204ENST00000463058 CCDC88BA6NC98 1476 aa12.09□□□□□ -0.47
HHLA3-204ENST00000463058 FANCD2Q9BXW9 1451 aa12.09□□□□□ -0.47
HHLA3-204ENST00000463058 CEP164Q9UPV0 1460 aa12.09□□□□□ -0.47
HHLA3-204ENST00000463058 PKD2Q13563 968 aa12.08□□□□□ -0.48
HHLA3-204ENST00000463058 CFTRP13569 1480 aa12.06□□□□□ -0.48
HHLA3-204ENST00000463058 STAG3Q9UJ98 1225 aa12.02□□□□□ -0.49
HHLA3-204ENST00000463058 URB2Q14146 1524 aaKnown RBP12.01□□□□□ -0.49
HHLA3-204ENST00000463058 SPOCK2Q92563 424 aa11.96□□□□□ -0.49
HHLA3-204ENST00000463058 KLHL34Q8N239 644 aa11.94□□□□□ -0.5
HHLA3-204ENST00000463058 PLCD3Q8N3E9 789 aa11.91□□□□□ -0.5
HHLA3-204ENST00000463058 ZNF608Q9ULD9 1512 aaPredicted RBP11.89□□□□□ -0.51
HHLA3-204ENST00000463058 MIER1Q8N108 512 aa11.88□□□□□ -0.51
HHLA3-204ENST00000463058 PRDM2Q13029 1718 aa11.86□□□□□ -0.51
HHLA3-204ENST00000463058 IFT140Q96RY7 1462 aa11.86□□□□□ -0.51
HHLA3-204ENST00000463058 PLCB2Q00722 1185 aa11.85□□□□□ -0.51
HHLA3-204ENST00000463058 TOPBP1Q92547 1522 aa11.85□□□□□ -0.51
HHLA3-204ENST00000463058 ECM2O94769 699 aaPredicted RBP11.81□□□□□ -0.52
HHLA3-204ENST00000463058 RIMBP3CA6NJZ7 1639 aa11.81□□□□□ -0.52
HHLA3-204ENST00000463058 RIMBP3BA6NNM3 1639 aa11.81□□□□□ -0.52
HHLA3-204ENST00000463058 RIMBP3Q9UFD9 1639 aa11.81□□□□□ -0.52
HHLA3-204ENST00000463058 ABCC8Q09428 1581 aa11.78□□□□□ -0.52
HHLA3-204ENST00000463058 AQRO60306 1485 aaKnown RBP eCLIP11.77□□□□□ -0.52
HHLA3-204ENST00000463058 ARHGEF11O15085 1522 aa11.77□□□□□ -0.52
HHLA3-204ENST00000463058 EIF4G3O43432 1585 aaKnown RBP11.77□□□□□ -0.53
HHLA3-204ENST00000463058 DNMBPQ6XZF7 1577 aa11.77□□□□□ -0.53
HHLA3-204ENST00000463058 RGL2O15211 777 aa11.77□□□□□ -0.53
HHLA3-204ENST00000463058 NPM1P06748 294 aaKnown RBP eCLIP11.77□□□□□ -0.53
HHLA3-204ENST00000463058 CYB5RLQ6IPT4 315 aa11.74□□□□□ -0.53
HHLA3-204ENST00000463058 AKT1S1Q96B36 256 aa11.74□□□□□ -0.53
HHLA3-204ENST00000463058 TARBP1Q13395 1621 aaKnown RBP11.74□□□□□ -0.53
HHLA3-204ENST00000463058 POLA1P09884 1462 aaPredicted RBP11.72□□□□□ -0.53
HHLA3-204ENST00000463058 RBM42Q9BTD8 480 aaKnown RBP11.72□□□□□ -0.53
HHLA3-204ENST00000463058 RAD54L2Q9Y4B4 1467 aa11.71□□□□□ -0.53
HHLA3-204ENST00000463058 WRNQ14191 1432 aaPredicted RBP eCLIP11.71□□□□□ -0.53
HHLA3-204ENST00000463058 CHD1O14646 1710 aa11.69□□□□□ -0.54
HHLA3-204ENST00000463058 TDRD9Q8NDG6 1382 aaKnown RBP11.69□□□□□ -0.54
HHLA3-204ENST00000463058 SPDYE1Q8NFV5 336 aaPredicted RBP11.69□□□□□ -0.54
HHLA3-204ENST00000463058 SOGA1O94964 1423 aa11.69□□□□□ -0.54
HHLA3-204ENST00000463058 ZBTB47Q9UFB7 747 aaPredicted RBP11.68□□□□□ -0.54
HHLA3-204ENST00000463058 REM2Q8IYK8 340 aaPredicted RBP11.67□□□□□ -0.54
HHLA3-204ENST00000463058 CIZ1Q9ULV3 898 aaPredicted RBP11.67□□□□□ -0.54
HHLA3-204ENST00000463058 CUX1P39880 1505 aa11.66□□□□□ -0.54
HHLA3-204ENST00000463058 PLEKHG5O94827 1062 aa11.66□□□□□ -0.54
HHLA3-204ENST00000463058 NUBP1P53384 320 aa11.66□□□□□ -0.54
HHLA3-204ENST00000463058 CREBZFQ9NS37 354 aa11.66□□□□□ -0.54
HHLA3-204ENST00000463058 ARAP1Q96P48 1450 aa11.65□□□□□ -0.54
HHLA3-204ENST00000463058 FGD5Q6ZNL6 1462 aa11.64□□□□□ -0.55
HHLA3-204ENST00000463058 MNX1P50219 401 aaPredicted RBP11.64□□□□□ -0.55
HHLA3-204ENST00000463058 HAP1P54257 671 aaPredicted RBP11.64□□□□□ -0.55
HHLA3-204ENST00000463058 SNAPC4Q5SXM2 1469 aa11.63□□□□□ -0.55
HHLA3-204ENST00000463058 BBXQ8WY36 941 aaPredicted RBP11.62□□□□□ -0.55
HHLA3-204ENST00000463058 CLEC11AQ9Y240 323 aa11.62□□□□□ -0.55
HHLA3-204ENST00000463058 CHMP7Q8WUX9 453 aaPredicted RBP11.61□□□□□ -0.55
HHLA3-204ENST00000463058 RNF25Q96BH1 459 aaPredicted RBP11.61□□□□□ -0.55
HHLA3-204ENST00000463058 SYNJ1O43426 1573 aa11.59□□□□□ -0.55
HHLA3-204ENST00000463058 TOP2BQ02880 1626 aa11.57□□□□□ -0.56
HHLA3-204ENST00000463058 CLASP1Q7Z460 1538 aa11.57□□□□□ -0.56
HHLA3-204ENST00000463058 PRR29P0C7W0 189 aa11.57□□□□□ -0.56
HHLA3-204ENST00000463058 GRIN2BQ13224 1484 aa11.57□□□□□ -0.56
HHLA3-204ENST00000463058 MAGI1Q96QZ7 1491 aaPredicted RBP11.57□□□□□ -0.56
HHLA3-204ENST00000463058 PITPNM1O00562 1244 aa11.56□□□□□ -0.56
HHLA3-204ENST00000463058 WDR97A6NE52 1622 aa11.56□□□□□ -0.56
HHLA3-204ENST00000463058 SYNJ2O15056 1496 aa11.54□□□□□ -0.56
HHLA3-204ENST00000463058 PAXIP1Q6ZW49 1069 aaPredicted RBP11.53□□□□□ -0.56
HHLA3-204ENST00000463058 BIVM-ERCC5R4GMW8 1640 aa11.53□□□□□ -0.56
HHLA3-204ENST00000463058 GAPVD1Q14C86 1478 aa11.52□□□□□ -0.56
HHLA3-204ENST00000463058 CHGAP10645 457 aaKnown RBP11.52□□□□□ -0.57
HHLA3-204ENST00000463058 GSE1Q14687 1217 aa11.52□□□□□ -0.57
HHLA3-204ENST00000463058 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.51□□□□□ -0.57
HHLA3-204ENST00000463058 RASEFQ8IZ41 740 aa11.5□□□□□ -0.57
HHLA3-204ENST00000463058 ABCA10Q8WWZ4 1543 aa11.5□□□□□ -0.57
HHLA3-204ENST00000463058 FAM9AQ8IZU1 332 aaPredicted RBP11.49□□□□□ -0.57
HHLA3-204ENST00000463058 PBRM1Q86U86 1689 aa11.49□□□□□ -0.57
HHLA3-204ENST00000463058 CFAP44Q96MT7 982 aa11.48□□□□□ -0.57
HHLA3-204ENST00000463058 KDM2AQ9Y2K7 1162 aa11.48□□□□□ -0.57
HHLA3-204ENST00000463058 KIF27Q86VH2 1401 aa11.48□□□□□ -0.57
HHLA3-204ENST00000463058 DCAF8Q5TAQ9 597 aa11.47□□□□□ -0.57
HHLA3-204ENST00000463058 HS6ST3Q8IZP7 471 aa11.47□□□□□ -0.57
HHLA3-204ENST00000463058 ABCA5Q8WWZ7 1642 aa11.46□□□□□ -0.57
HHLA3-204ENST00000463058 VSIG10Q8N0Z9 540 aa11.46□□□□□ -0.57
HHLA3-204ENST00000463058 FAM212AQ96EL1 285 aa11.43□□□□□ -0.58
HHLA3-204ENST00000463058 GRIN2AQ12879 1464 aa11.43□□□□□ -0.58
HHLA3-204ENST00000463058 ERCC6L2Q5T890 1561 aa11.42□□□□□ -0.58
HHLA3-204ENST00000463058 SPRYD3Q8NCJ5 442 aa11.41□□□□□ -0.58
HHLA3-204ENST00000463058 TSHZ2Q9NRE2 1034 aa11.41□□□□□ -0.58
HHLA3-204ENST00000463058 IGF1RP08069 1367 aa11.41□□□□□ -0.58
HHLA3-204ENST00000463058 RUSC2Q8N2Y8 1516 aa11.4□□□□□ -0.58
HHLA3-204ENST00000463058 RIOK3O14730 519 aaKnown RBP11.4□□□□□ -0.58
HHLA3-204ENST00000463058 ADAMTS12P58397 1594 aa11.39□□□□□ -0.59
HHLA3-204ENST00000463058 NUP160Q12769 1436 aa11.39□□□□□ -0.59
HHLA3-204ENST00000463058 NKX1-1Q15270 411 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms