RNA–Protein interactions for RNA: ENST00000462257.1

SH3D19-205, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-205ENST00000462257 WIZO95785 1651 aa13.56□□□□□ -0.24
SH3D19-205ENST00000462257 SPDYE2BA6NHP3 402 aa13.54□□□□□ -0.24
SH3D19-205ENST00000462257 SPDYE6P0CI01 402 aa13.54□□□□□ -0.24
SH3D19-205ENST00000462257 SPDYE2Q495Y8 402 aa13.54□□□□□ -0.24
SH3D19-205ENST00000462257 CFTRP13569 1480 aa13.53□□□□□ -0.24
SH3D19-205ENST00000462257 PRKAR2AP13861 404 aaKnown RBP13.51□□□□□ -0.25
SH3D19-205ENST00000462257 FBLN2P98095 1184 aa13.51□□□□□ -0.25
SH3D19-205ENST00000462257 CLEC11AQ9Y240 323 aa13.49□□□□□ -0.25
SH3D19-205ENST00000462257 EHMT2Q96KQ7 1210 aa13.48□□□□□ -0.25
SH3D19-205ENST00000462257 SPDYE1Q8NFV5 336 aaPredicted RBP13.46□□□□□ -0.25
SH3D19-205ENST00000462257 URB2Q14146 1524 aaKnown RBP13.45□□□□□ -0.26
SH3D19-205ENST00000462257 RIMBP3CA6NJZ7 1639 aa13.43□□□□□ -0.26
SH3D19-205ENST00000462257 RIMBP3BA6NNM3 1639 aa13.43□□□□□ -0.26
SH3D19-205ENST00000462257 RIMBP3Q9UFD9 1639 aa13.43□□□□□ -0.26
SH3D19-205ENST00000462257 PRDM2Q13029 1718 aa13.41□□□□□ -0.26
SH3D19-205ENST00000462257 TOP2AP11388 1531 aaKnown RBP13.39□□□□□ -0.27
SH3D19-205ENST00000462257 IFT140Q96RY7 1462 aa13.38□□□□□ -0.27
SH3D19-205ENST00000462257 C19orf67A6NJJ6 358 aa13.38□□□□□ -0.27
SH3D19-205ENST00000462257 MKRN4PQ13434 485 aaPredicted RBP13.38□□□□□ -0.27
SH3D19-205ENST00000462257 RSF1Q96T23 1441 aaPredicted RBP13.37□□□□□ -0.27
SH3D19-205ENST00000462257 ARHGEF11O15085 1522 aa13.36□□□□□ -0.27
SH3D19-205ENST00000462257 ABCC8Q09428 1581 aa13.34□□□□□ -0.27
SH3D19-205ENST00000462257 GABBR2O75899 941 aa13.33□□□□□ -0.28
SH3D19-205ENST00000462257 LHX8Q68G74 356 aa13.33□□□□□ -0.28
SH3D19-205ENST00000462257 ZNF692Q9BU19 519 aaPredicted RBP13.32□□□□□ -0.28
SH3D19-205ENST00000462257 ZNF608Q9ULD9 1512 aaPredicted RBP13.31□□□□□ -0.28
SH3D19-205ENST00000462257 CYB5RLQ6IPT4 315 aa13.31□□□□□ -0.28
SH3D19-205ENST00000462257 TOPBP1Q92547 1522 aa13.28□□□□□ -0.28
SH3D19-205ENST00000462257 EIF4G3O43432 1585 aaKnown RBP13.25□□□□□ -0.29
SH3D19-205ENST00000462257 SSUH2Q9Y2M2 353 aa13.25□□□□□ -0.29
SH3D19-205ENST00000462257 CCDC88BA6NC98 1476 aa13.24□□□□□ -0.29
SH3D19-205ENST00000462257 DNMBPQ6XZF7 1577 aa13.23□□□□□ -0.29
SH3D19-205ENST00000462257 CHD1O14646 1710 aa13.22□□□□□ -0.29
SH3D19-205ENST00000462257 CHADLQ6NUI6 762 aa13.21□□□□□ -0.29
SH3D19-205ENST00000462257 TARBP1Q13395 1621 aaKnown RBP13.19□□□□□ -0.3
SH3D19-205ENST00000462257 AQRO60306 1485 aaKnown RBP eCLIP13.18□□□□□ -0.3
SH3D19-205ENST00000462257 ARAP1Q96P48 1450 aa13.18□□□□□ -0.3
SH3D19-205ENST00000462257 PRR29P0C7W0 189 aa13.18□□□□□ -0.3
SH3D19-205ENST00000462257 WDR97A6NE52 1622 aa13.12□□□□□ -0.31
SH3D19-205ENST00000462257 POLA1P09884 1462 aaPredicted RBP13.11□□□□□ -0.31
SH3D19-205ENST00000462257 SOGA1O94964 1423 aa13.09□□□□□ -0.31
SH3D19-205ENST00000462257 CHMP7Q8WUX9 453 aaPredicted RBP13.09□□□□□ -0.31
SH3D19-205ENST00000462257 SYNJ1O43426 1573 aa13.08□□□□□ -0.32
SH3D19-205ENST00000462257 TDRD9Q8NDG6 1382 aaKnown RBP13.07□□□□□ -0.32
SH3D19-205ENST00000462257 CLASP1Q7Z460 1538 aa13.06□□□□□ -0.32
SH3D19-205ENST00000462257 MAGI1Q96QZ7 1491 aaPredicted RBP13.05□□□□□ -0.32
SH3D19-205ENST00000462257 CD44P16070 742 aaKnown RBP13.05□□□□□ -0.32
SH3D19-205ENST00000462257 RAD54L2Q9Y4B4 1467 aa13.04□□□□□ -0.32
SH3D19-205ENST00000462257 SNAPC4Q5SXM2 1469 aa13.04□□□□□ -0.32
SH3D19-205ENST00000462257 CLCN6P51797 869 aa13.02□□□□□ -0.33
SH3D19-205ENST00000462257 GRIN2BQ13224 1484 aa13.02□□□□□ -0.33
SH3D19-205ENST00000462257 SYNJ2O15056 1496 aa13□□□□□ -0.33
SH3D19-205ENST00000462257 FGD5Q6ZNL6 1462 aa12.99□□□□□ -0.33
SH3D19-205ENST00000462257 FARP1Q9Y4F1 1045 aaPredicted RBP12.98□□□□□ -0.33
SH3D19-205ENST00000462257 POTEIP0CG38 1075 aa12.97□□□□□ -0.33
SH3D19-205ENST00000462257 PLSCR2Q9NRY7 297 aa12.97□□□□□ -0.33
SH3D19-205ENST00000462257 GAPVD1Q14C86 1478 aa12.96□□□□□ -0.34
SH3D19-205ENST00000462257 DCBLD2Q96PD2 775 aa12.95□□□□□ -0.34
SH3D19-205ENST00000462257 CUX1P39880 1505 aa12.93□□□□□ -0.34
SH3D19-205ENST00000462257 PBRM1Q86U86 1689 aa12.93□□□□□ -0.34
SH3D19-205ENST00000462257 ABCA10Q8WWZ4 1543 aa12.86□□□□□ -0.35
SH3D19-205ENST00000462257 ABCA5Q8WWZ7 1642 aa12.84□□□□□ -0.35
SH3D19-205ENST00000462257 GRIN2AQ12879 1464 aa12.83□□□□□ -0.36
SH3D19-205ENST00000462257 ZRANB1Q9UGI0 708 aa12.8□□□□□ -0.36
SH3D19-205ENST00000462257 CEP170Q5SW79 1584 aa12.8□□□□□ -0.36
SH3D19-205ENST00000462257 SPDYE4A6NLX3 237 aa12.79□□□□□ -0.36
SH3D19-205ENST00000462257 ZNF579Q8NAF0 562 aaKnown RBP12.79□□□□□ -0.36
SH3D19-205ENST00000462257 NUP160Q12769 1436 aa12.79□□□□□ -0.36
SH3D19-205ENST00000462257 WRNQ14191 1432 aaPredicted RBP eCLIP12.79□□□□□ -0.36
SH3D19-205ENST00000462257 ERCC6L2Q5T890 1561 aa12.77□□□□□ -0.36
SH3D19-205ENST00000462257 SHROOM2Q13796 1616 aa12.77□□□□□ -0.36
SH3D19-205ENST00000462257 FHAD1B1AJZ9 1412 aa12.76□□□□□ -0.37
SH3D19-205ENST00000462257 KIF13AQ9H1H9 1805 aa12.76□□□□□ -0.37
SH3D19-205ENST00000462257 ADAMTS12P58397 1594 aa12.75□□□□□ -0.37
SH3D19-205ENST00000462257 NPM1P06748 294 aaKnown RBP eCLIP12.74□□□□□ -0.37
SH3D19-205ENST00000462257 ERICH3Q5RHP9 1530 aa12.72□□□□□ -0.37
SH3D19-205ENST00000462257 JPH4Q96JJ6 628 aa12.71□□□□□ -0.37
SH3D19-205ENST00000462257 PRG4Q92954 1404 aaPredicted RBP12.7□□□□□ -0.38
SH3D19-205ENST00000462257 TOP2BQ02880 1626 aa12.69□□□□□ -0.38
SH3D19-205ENST00000462257 BIVM-ERCC5R4GMW8 1640 aa12.69□□□□□ -0.38
SH3D19-205ENST00000462257 FAM69CQ0P6D2 419 aa12.68□□□□□ -0.38
SH3D19-205ENST00000462257 ABCC10Q5T3U5 1492 aa12.67□□□□□ -0.38
SH3D19-205ENST00000462257 STAG3Q9UJ98 1225 aa12.67□□□□□ -0.38
SH3D19-205ENST00000462257 GALR2O43603 387 aaPredicted RBP12.66□□□□□ -0.38
SH3D19-205ENST00000462257 PAK3O75914 559 aaPredicted RBP12.66□□□□□ -0.38
SH3D19-205ENST00000462257 MAPKBP1O60336 1514 aa12.65□□□□□ -0.38
SH3D19-205ENST00000462257 CREBZFQ9NS37 354 aa12.64□□□□□ -0.39
SH3D19-205ENST00000462257 OTUD5Q96G74 571 aa12.63□□□□□ -0.39
SH3D19-205ENST00000462257 DIP2BQ9P265 1576 aa12.6□□□□□ -0.39
SH3D19-205ENST00000462257 KDM6BO15054 1643 aa12.6□□□□□ -0.39
SH3D19-205ENST00000462257 RUSC2Q8N2Y8 1516 aa12.58□□□□□ -0.4
SH3D19-205ENST00000462257 POTEMA6NI47 508 aa12.58□□□□□ -0.4
SH3D19-205ENST00000462257 PROM2Q8N271 834 aa12.58□□□□□ -0.4
SH3D19-205ENST00000462257 KDM4FA0A1W2PPD8 638 aa12.57□□□□□ -0.4
SH3D19-205ENST00000462257 ADCY10Q96PN6 1610 aa12.57□□□□□ -0.4
SH3D19-205ENST00000462257 SUPT5HO00267 1087 aaKnown RBP12.56□□□□□ -0.4
SH3D19-205ENST00000462257 KIAA0586Q9BVV6 1533 aa12.55□□□□□ -0.4
SH3D19-205ENST00000462257 POTEB2H3BUK9 544 aa12.54□□□□□ -0.4
SH3D19-205ENST00000462257 TSPOAP1O95153 1857 aa12.54□□□□□ -0.4
SH3D19-205ENST00000462257 POTEGQ6S5H5 508 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms