RNA–Protein interactions for RNA: ENST00000462257.1

SH3D19-205, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-205ENST00000462257 AEBP2Q6ZN18 517 aaPredicted RBP25.44■■□□□ 1.66
SH3D19-205ENST00000462257 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
SH3D19-205ENST00000462257 SENP3Q9H4L4 574 aaPredicted RBP21.91■■□□□ 1.1
SH3D19-205ENST00000462257 PHF23Q9BUL5 403 aaPredicted RBP21.51■■□□□ 1.03
SH3D19-205ENST00000462257 FOXD1Q16676 465 aa20.41■□□□□ 0.86
SH3D19-205ENST00000462257 POTEDQ86YR6 584 aa19.75■□□□□ 0.75
SH3D19-205ENST00000462257 MSH5O43196 834 aa19.4■□□□□ 0.7
SH3D19-205ENST00000462257 PIAS4Q8N2W9 510 aaPredicted RBP19.02■□□□□ 0.64
SH3D19-205ENST00000462257 PLPPR3Q6T4P5 718 aa18.78■□□□□ 0.6
SH3D19-205ENST00000462257 PPP6R1Q9UPN7 881 aa18.64■□□□□ 0.57
SH3D19-205ENST00000462257 ADRA2BP18089 450 aa18.59■□□□□ 0.57
SH3D19-205ENST00000462257 NISCHQ9Y2I1 1504 aa17.88■□□□□ 0.45
SH3D19-205ENST00000462257 DMRT2Q9Y5R5 561 aa17.25■□□□□ 0.35
SH3D19-205ENST00000462257 MAPK8IP2Q13387 824 aaPredicted RBP17.22■□□□□ 0.35
SH3D19-205ENST00000462257 SCAF1Q9H7N4 1312 aaKnown RBP17.15■□□□□ 0.34
SH3D19-205ENST00000462257 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
SH3D19-205ENST00000462257 DCAF8L1A6NGE4 600 aa16.68■□□□□ 0.26
SH3D19-205ENST00000462257 RNF39Q9H2S5 420 aa16.43■□□□□ 0.22
SH3D19-205ENST00000462257 HOXD11P31277 338 aaPredicted RBP16.4■□□□□ 0.22
SH3D19-205ENST00000462257 ABCC9O60706 1549 aa16.4■□□□□ 0.22
SH3D19-205ENST00000462257 PPP4R3CPQ6ZMV5 832 aa16.36■□□□□ 0.21
SH3D19-205ENST00000462257 C1QBPQ07021 282 aaKnown RBP16.22■□□□□ 0.19
SH3D19-205ENST00000462257 CCDC180Q9P1Z9 1646 aa16.22■□□□□ 0.19
SH3D19-205ENST00000462257 CNKSR2Q8WXI2 1034 aa16.2■□□□□ 0.18
SH3D19-205ENST00000462257 RNF216Q9NWF9 866 aaPredicted RBP16.17■□□□□ 0.18
SH3D19-205ENST00000462257 DNAJC5BQ9UF47 199 aa15.95■□□□□ 0.14
SH3D19-205ENST00000462257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.72■□□□□ 0.114e-8■□□□□ 10.9
SH3D19-205ENST00000462257 NCBP3Q53F19 620 aaKnown RBP15.69■□□□□ 0.1
SH3D19-205ENST00000462257 RB1CC1Q8TDY2 1594 aa15.58■□□□□ 0.09
SH3D19-205ENST00000462257 NPM3O75607 178 aaKnown RBP15.51■□□□□ 0.07
SH3D19-205ENST00000462257 POTEHQ6S545 545 aa15.41■□□□□ 0.06
SH3D19-205ENST00000462257 NACADO15069 1562 aa15.41■□□□□ 0.06
SH3D19-205ENST00000462257 KCNA4P22459 653 aa15.35■□□□□ 0.05
SH3D19-205ENST00000462257 CAPN15O75808 1086 aa15.26■□□□□ 0.03
SH3D19-205ENST00000462257 DCAF8L2P0C7V8 631 aa15.23■□□□□ 0.03
SH3D19-205ENST00000462257 U3KPZ7 1027 aaPredicted RBP15.23■□□□□ 0.03
SH3D19-205ENST00000462257 PABPN1Q86U42 306 aaKnown RBP eCLIP15.22■□□□□ 0.03
SH3D19-205ENST00000462257 DSG3P32926 999 aa15.21■□□□□ 0.03
SH3D19-205ENST00000462257 UNC13AQ9UPW8 1703 aa15.17■□□□□ 0.02
SH3D19-205ENST00000462257 SPINK5Q9NQ38 1064 aaPredicted RBP15.17■□□□□ 0.02
SH3D19-205ENST00000462257 MYO15BQ96JP2 1530 aa15.12■□□□□ 0.01
SH3D19-205ENST00000462257 BICRAQ9NZM4 1560 aa15.06■□□□□ 0
SH3D19-205ENST00000462257 SHROOM4Q9ULL8 1493 aa14.94□□□□□ -0.02
SH3D19-205ENST00000462257 APLP2Q06481 763 aa14.93□□□□□ -0.02
SH3D19-205ENST00000462257 TRHP20396 242 aaPredicted RBP14.89□□□□□ -0.03
SH3D19-205ENST00000462257 ZNF219Q9P2Y4 722 aaPredicted RBP14.85□□□□□ -0.03
SH3D19-205ENST00000462257 CECR2Q9BXF3 1484 aa14.83□□□□□ -0.03
SH3D19-205ENST00000462257 CC2D2AQ9P2K1 1620 aa14.83□□□□□ -0.04
SH3D19-205ENST00000462257 ABCB7O75027 752 aa14.82□□□□□ -0.04
SH3D19-205ENST00000462257 DCAF1Q9Y4B6 1507 aa14.82□□□□□ -0.04
SH3D19-205ENST00000462257 SLC4A2P04920 1241 aa14.79□□□□□ -0.04
SH3D19-205ENST00000462257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.75□□□□□ -0.05
SH3D19-205ENST00000462257 HNRNPUL2Q1KMD3 747 aaKnown RBP14.75□□□□□ -0.05
SH3D19-205ENST00000462257 ZCCHC6Q5VYS8 1495 aaKnown RBP14.74□□□□□ -0.05
SH3D19-205ENST00000462257 EIF4G1Q04637 1599 aaKnown RBP14.73□□□□□ -0.05
SH3D19-205ENST00000462257 SCRIBQ14160 1630 aa14.66□□□□□ -0.06
SH3D19-205ENST00000462257 RBM42Q9BTD8 480 aaKnown RBP14.64□□□□□ -0.07
SH3D19-205ENST00000462257 DNAJC5Q9H3Z4 198 aa14.64□□□□□ -0.07
SH3D19-205ENST00000462257 SAMD1Q6SPF0 538 aaPredicted RBP14.61□□□□□ -0.07
SH3D19-205ENST00000462257 SLC4A1APQ9BWU0 796 aaKnown RBP14.5□□□□□ -0.09
SH3D19-205ENST00000462257 CHRDL2Q6WN34 429 aa14.46□□□□□ -0.09
SH3D19-205ENST00000462257 CUX2O14529 1486 aa14.33□□□□□ -0.12
SH3D19-205ENST00000462257 POLA2Q14181 598 aa14.33□□□□□ -0.12
SH3D19-205ENST00000462257 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
SH3D19-205ENST00000462257 FOXD4L1Q9NU39 408 aa14.26□□□□□ -0.13
SH3D19-205ENST00000462257 ERCC6Q03468 1493 aa14.24□□□□□ -0.13
SH3D19-205ENST00000462257 NCAPD3P42695 1498 aa14.21□□□□□ -0.13
SH3D19-205ENST00000462257 SP7Q8TDD2 431 aaPredicted RBP14.21□□□□□ -0.13
SH3D19-205ENST00000462257 ZBTB22O15209 634 aa14.15□□□□□ -0.14
SH3D19-205ENST00000462257 AKT1S1Q96B36 256 aa14.14□□□□□ -0.15
SH3D19-205ENST00000462257 SMARCA2P51531 1590 aa14.09□□□□□ -0.15
SH3D19-205ENST00000462257 ATAD2BQ9ULI0 1458 aa14.08□□□□□ -0.16
SH3D19-205ENST00000462257 HMGXB3Q12766 1538 aa14.07□□□□□ -0.16
SH3D19-205ENST00000462257 ZBTB12Q9Y330 459 aaPredicted RBP14.07□□□□□ -0.16
SH3D19-205ENST00000462257 SMARCA4P51532 1647 aa14.01□□□□□ -0.17
SH3D19-205ENST00000462257 ATF5Q9Y2D1 282 aaPredicted RBP14□□□□□ -0.17
SH3D19-205ENST00000462257 NESP48681 1621 aa13.98□□□□□ -0.17
SH3D19-205ENST00000462257 REM2Q8IYK8 340 aaPredicted RBP13.98□□□□□ -0.17
SH3D19-205ENST00000462257 PIP4P2Q8N4L2 257 aa13.98□□□□□ -0.17
SH3D19-205ENST00000462257 LAMC3Q9Y6N6 1575 aa13.96□□□□□ -0.18
SH3D19-205ENST00000462257 BAZ1BQ9UIG0 1483 aaKnown RBP13.95□□□□□ -0.18
SH3D19-205ENST00000462257 HAX1O00165 279 aa13.94□□□□□ -0.18
SH3D19-205ENST00000462257 BAZ1AQ9NRL2 1556 aaPredicted RBP13.93□□□□□ -0.18
SH3D19-205ENST00000462257 THOC2Q8NI27 1593 aaKnown RBP13.92□□□□□ -0.18
SH3D19-205ENST00000462257 PEG3Q9GZU2 1588 aa13.9□□□□□ -0.18
SH3D19-205ENST00000462257 PDS5BQ9NTI5 1447 aa13.9□□□□□ -0.19
SH3D19-205ENST00000462257 OSCARQ8IYS5 282 aa13.88□□□□□ -0.19
SH3D19-205ENST00000462257 KIF21AQ7Z4S6 1674 aa13.84□□□□□ -0.19
SH3D19-205ENST00000462257 PITPNM1O00562 1244 aa13.83□□□□□ -0.2
SH3D19-205ENST00000462257 ATXN8OSP0DMR3 200 aa13.83□□□□□ -0.2
SH3D19-205ENST00000462257 TRIM41Q8WV44 630 aa13.83□□□□□ -0.2
SH3D19-205ENST00000462257 FXR2P51116 673 aaKnown RBP eCLIP13.8□□□□□ -0.2
SH3D19-205ENST00000462257 CADPSQ9ULU8 1353 aa13.76□□□□□ -0.21
SH3D19-205ENST00000462257 MROH2BQ7Z745 1585 aa13.74□□□□□ -0.21
SH3D19-205ENST00000462257 MRC2Q9UBG0 1479 aa13.74□□□□□ -0.21
SH3D19-205ENST00000462257 WDR62O43379 1518 aa13.7□□□□□ -0.22
SH3D19-205ENST00000462257 CEP164Q9UPV0 1460 aa13.64□□□□□ -0.23
SH3D19-205ENST00000462257 CSRNP3Q8WYN3 585 aa13.63□□□□□ -0.23
SH3D19-205ENST00000462257 EVX2Q03828 476 aa13.59□□□□□ -0.23
SH3D19-205ENST00000462257 FANCD2Q9BXW9 1451 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms