RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 SLAIN1Q8ND83 568 aa9.37□□□□□ -0.91
PTPN22-203ENST00000460620 POTEFA5A3E0 1075 aa9.35□□□□□ -0.91
PTPN22-203ENST00000460620 SNPHO15079 494 aa9.34□□□□□ -0.91
PTPN22-203ENST00000460620 KRTAP3-3Q9BYR6 98 aa9.34□□□□□ -0.91
PTPN22-203ENST00000460620 KRTAP3-2Q9BYR7 98 aa9.34□□□□□ -0.91
PTPN22-203ENST00000460620 RNF166Q96A37 237 aaPredicted RBP9.33□□□□□ -0.92
PTPN22-203ENST00000460620 MS4A3Q96HJ5 214 aa9.3□□□□□ -0.92
PTPN22-203ENST00000460620 ATN1P54259 1190 aaPredicted RBP9.29□□□□□ -0.92
PTPN22-203ENST00000460620 MARVELD3Q96A59 401 aa9.26□□□□□ -0.93
PTPN22-203ENST00000460620 PABPN1Q86U42 306 aaKnown RBP eCLIP9.25□□□□□ -0.93
PTPN22-203ENST00000460620 SEC24BO95487 1268 aa9.22□□□□□ -0.93
PTPN22-203ENST00000460620 KCNA4P22459 653 aa9.22□□□□□ -0.93
PTPN22-203ENST00000460620 EMP3P54852 163 aa9.19□□□□□ -0.94
PTPN22-203ENST00000460620 HS3ST6Q96QI5 342 aa9.14□□□□□ -0.95
PTPN22-203ENST00000460620 COLQQ9Y215 455 aaPredicted RBP9.12□□□□□ -0.95
PTPN22-203ENST00000460620 MYT1LQ9UL68 1186 aa9.1□□□□□ -0.95
PTPN22-203ENST00000460620 CREBZFQ9NS37 354 aa9.09□□□□□ -0.95
PTPN22-203ENST00000460620 BMP2KQ9NSY1 1161 aaPredicted RBP9.06□□□□□ -0.96
PTPN22-203ENST00000460620 IER5LQ5T953 404 aa9.05□□□□□ -0.96
PTPN22-203ENST00000460620 NPM1P06748 294 aaKnown RBP eCLIP9.04□□□□□ -0.96
PTPN22-203ENST00000460620 FAM205CA6NFA0 338 aa9.03□□□□□ -0.96
PTPN22-203ENST00000460620 POTEB3A0JP26 581 aa9.02□□□□□ -0.97
PTPN22-203ENST00000460620 TIE1P35590 1138 aa9.02□□□□□ -0.97
PTPN22-203ENST00000460620 POTEBQ6S5H4 581 aa9.02□□□□□ -0.97
PTPN22-203ENST00000460620 PTGER2P43116 358 aa8.99□□□□□ -0.97
PTPN22-203ENST00000460620 MKRN4PQ13434 485 aaPredicted RBP8.95□□□□□ -0.98
PTPN22-203ENST00000460620 PLA2G2EQ9NZK7 142 aa8.94□□□□□ -0.98
PTPN22-203ENST00000460620 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.88□□□□□ -0.99
PTPN22-203ENST00000460620 IRX2Q9BZI1 471 aaPredicted RBP8.87□□□□□ -0.99
PTPN22-203ENST00000460620 STAG3Q9UJ98 1225 aa8.84□□□□□ -1
PTPN22-203ENST00000460620 PLCG2P16885 1265 aa8.83□□□□□ -1
PTPN22-203ENST00000460620 TTLL13PA6NNM8 815 aa8.82□□□□□ -1
PTPN22-203ENST00000460620 RGS20O76081 388 aa8.81□□□□□ -1
PTPN22-203ENST00000460620 KIF12Q96FN5 646 aa8.78□□□□□ -1
PTPN22-203ENST00000460620 TRPC6Q9Y210 931 aa8.77□□□□□ -1.01
PTPN22-203ENST00000460620 TRIM35Q9UPQ4 493 aa8.76□□□□□ -1.01
PTPN22-203ENST00000460620 SLC4A1APQ9BWU0 796 aaKnown RBP8.76□□□□□ -1.01
PTPN22-203ENST00000460620 FOXD4L1Q9NU39 408 aa8.71□□□□□ -1.01
PTPN22-203ENST00000460620 CCDC61Q9Y6R9 512 aa8.71□□□□□ -1.01
PTPN22-203ENST00000460620 ATXN8OSP0DMR3 200 aa8.71□□□□□ -1.02
PTPN22-203ENST00000460620 LOC100996750A0A140TA64 210 aa8.7□□□□□ -1.02
PTPN22-203ENST00000460620 KRTAP4-6Q9BYQ5 205 aa8.7□□□□□ -1.02
PTPN22-203ENST00000460620 MNX1P50219 401 aaPredicted RBP8.67□□□□□ -1.02
PTPN22-203ENST00000460620 ERBB3P21860 1342 aa8.64□□□□□ -1.03
PTPN22-203ENST00000460620 TSPYL2Q9H2G4 693 aaPredicted RBP8.63□□□□□ -1.03
PTPN22-203ENST00000460620 HCSTQ9UBK5 93 aa8.63□□□□□ -1.03
PTPN22-203ENST00000460620 IRX5P78411 483 aaPredicted RBP8.61□□□□□ -1.03
PTPN22-203ENST00000460620 MAP3K13O43283 966 aa8.59□□□□□ -1.03
PTPN22-203ENST00000460620 OCEL1Q9H607 264 aa8.57□□□□□ -1.04
PTPN22-203ENST00000460620 C3orf67Q6ZVT6 689 aa8.56□□□□□ -1.04
PTPN22-203ENST00000460620 HOXB1P14653 301 aaPredicted RBP8.55□□□□□ -1.04
PTPN22-203ENST00000460620 Q6ZNB5 142 aa8.53□□□□□ -1.04
PTPN22-203ENST00000460620 ZNF687Q8N1G0 1237 aa8.51□□□□□ -1.05
PTPN22-203ENST00000460620 SGIP1Q9BQI5 828 aa8.51□□□□□ -1.05
PTPN22-203ENST00000460620 ZBTB22O15209 634 aa8.46□□□□□ -1.05
PTPN22-203ENST00000460620 VARS2Q5ST30 1063 aaKnown RBP8.46□□□□□ -1.05
PTPN22-203ENST00000460620 ZNF710Q8N1W2 664 aa8.44□□□□□ -1.06
PTPN22-203ENST00000460620 ANKRD13DQ6ZTN6 518 aa8.43□□□□□ -1.06
PTPN22-203ENST00000460620 L3MBTL3Q96JM7 780 aaPredicted RBP8.4□□□□□ -1.06
PTPN22-203ENST00000460620 TMEM106CQ9BVX2 250 aa8.4□□□□□ -1.07
PTPN22-203ENST00000460620 HOXB3P14651 431 aaPredicted RBP8.37□□□□□ -1.07
PTPN22-203ENST00000460620 DOK7Q18PE1 504 aa8.35□□□□□ -1.07
PTPN22-203ENST00000460620 IFFO2Q5TF58 517 aa8.35□□□□□ -1.07
PTPN22-203ENST00000460620 PCDHB13Q9Y5F0 798 aa8.33□□□□□ -1.08
PTPN22-203ENST00000460620 RIMBP2O15034 1052 aa8.3□□□□□ -1.08
PTPN22-203ENST00000460620 LSM11P83369 360 aaKnown RBP eCLIP8.3□□□□□ -1.08
PTPN22-203ENST00000460620 LAPTM4AQ15012 233 aa8.27□□□□□ -1.08
PTPN22-203ENST00000460620 A0A0G2JS52 829 aa8.25□□□□□ -1.09
PTPN22-203ENST00000460620 TRAF7Q6Q0C0 670 aa8.24□□□□□ -1.09
PTPN22-203ENST00000460620 ZSWIM6Q9HCJ5 1215 aa8.2□□□□□ -1.1
PTPN22-203ENST00000460620 CSRNP3Q8WYN3 585 aa8.2□□□□□ -1.1
PTPN22-203ENST00000460620 IFNL1Q8IU54 200 aa8.17□□□□□ -1.1
PTPN22-203ENST00000460620 PDCD7Q8N8D1 485 aaKnown RBP8.17□□□□□ -1.1
PTPN22-203ENST00000460620 ZNF775Q96BV0 537 aaPredicted RBP8.17□□□□□ -1.1
PTPN22-203ENST00000460620 EHMT2Q96KQ7 1210 aa8.14□□□□□ -1.11
PTPN22-203ENST00000460620 PBX2P40425 430 aa8.13□□□□□ -1.11
PTPN22-203ENST00000460620 ZNF787Q6DD87 383 aa8.13□□□□□ -1.11
PTPN22-203ENST00000460620 LCE2BO14633 110 aa8.11□□□□□ -1.11
PTPN22-203ENST00000460620 RASEFQ8IZ41 740 aa8.07□□□□□ -1.12
PTPN22-203ENST00000460620 STK17AQ9UEE5 414 aa8.05□□□□□ -1.12
PTPN22-203ENST00000460620 G3V3G9 751 aa8.01□□□□□ -1.13
PTPN22-203ENST00000460620 DCAF8Q5TAQ9 597 aa8.01□□□□□ -1.13
PTPN22-203ENST00000460620 SUZ12Q15022 739 aaKnown RBP7.98□□□□□ -1.13
PTPN22-203ENST00000460620 GPR153Q6NV75 609 aa7.97□□□□□ -1.13
PTPN22-203ENST00000460620 ZNF316A6NFI3 1004 aaPredicted RBP7.97□□□□□ -1.13
PTPN22-203ENST00000460620 MKRN3Q13064 507 aaKnown RBP7.97□□□□□ -1.13
PTPN22-203ENST00000460620 PLEKHG5O94827 1062 aa7.93□□□□□ -1.14
PTPN22-203ENST00000460620 GOLGA2Q08379 1002 aa7.93□□□□□ -1.14
PTPN22-203ENST00000460620 ADGRD1Q6QNK2 874 aa7.93□□□□□ -1.14
PTPN22-203ENST00000460620 GFRA3O60609 400 aa7.92□□□□□ -1.14
PTPN22-203ENST00000460620 KCTD12Q96CX2 325 aaKnown RBP7.92□□□□□ -1.14
PTPN22-203ENST00000460620 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.92□□□□□ -1.14
PTPN22-203ENST00000460620 BOLA1Q9Y3E2 137 aa7.89□□□□□ -1.15
PTPN22-203ENST00000460620 NRG2O14511 850 aaPredicted RBP7.87□□□□□ -1.15
PTPN22-203ENST00000460620 TK2O00142 265 aa7.86□□□□□ -1.15
PTPN22-203ENST00000460620 TREML4Q6UXN2 200 aa7.84□□□□□ -1.15
PTPN22-203ENST00000460620 STAC3Q96MF2 364 aa7.82□□□□□ -1.16
PTPN22-203ENST00000460620 HRO43593 1189 aa7.8□□□□□ -1.16
PTPN22-203ENST00000460620 ILDR1Q86SU0 546 aaPredicted RBP7.8□□□□□ -1.16
PTPN22-203ENST00000460620 PTPN5P54829 565 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms