RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 NUBP1P53384 320 aa12.21□□□□□ -0.45
VBP1-202ENST00000460509 NPM1P06748 294 aaKnown RBP eCLIP12.2□□□□□ -0.46
VBP1-202ENST00000460509 GSE1Q14687 1217 aa12.18□□□□□ -0.46
VBP1-202ENST00000460509 FAM212AQ96EL1 285 aa12.16□□□□□ -0.46
VBP1-202ENST00000460509 RASEFQ8IZ41 740 aa12.13□□□□□ -0.47
VBP1-202ENST00000460509 RGL2O15211 777 aa12.11□□□□□ -0.47
VBP1-202ENST00000460509 TRIM41Q8WV44 630 aa12.09□□□□□ -0.47
VBP1-202ENST00000460509 TSPYL2Q9H2G4 693 aaPredicted RBP12.07□□□□□ -0.48
VBP1-202ENST00000460509 ZRANB1Q9UGI0 708 aa12.07□□□□□ -0.48
VBP1-202ENST00000460509 ZNF579Q8NAF0 562 aaKnown RBP12.02□□□□□ -0.49
VBP1-202ENST00000460509 PYGBP11216 843 aa12.01□□□□□ -0.49
VBP1-202ENST00000460509 SLC24A1O60721 1099 aa12□□□□□ -0.49
VBP1-202ENST00000460509 POTEIP0CG38 1075 aa12□□□□□ -0.49
VBP1-202ENST00000460509 PAK3O75914 559 aaPredicted RBP11.96□□□□□ -0.49
VBP1-202ENST00000460509 CHGAP10645 457 aaKnown RBP11.96□□□□□ -0.49
VBP1-202ENST00000460509 RNF25Q96BH1 459 aaPredicted RBP11.95□□□□□ -0.5
VBP1-202ENST00000460509 CLCN6P51797 869 aa11.94□□□□□ -0.5
VBP1-202ENST00000460509 PHF12Q96QT6 1004 aa11.94□□□□□ -0.5
VBP1-202ENST00000460509 RIOK3O14730 519 aaKnown RBP11.93□□□□□ -0.5
VBP1-202ENST00000460509 PLSCR2Q9NRY7 297 aa11.93□□□□□ -0.5
VBP1-202ENST00000460509 GALR2O43603 387 aaPredicted RBP11.92□□□□□ -0.5
VBP1-202ENST00000460509 CHRM1P11229 460 aaPredicted RBP11.92□□□□□ -0.5
VBP1-202ENST00000460509 LHX8Q68G74 356 aa11.91□□□□□ -0.5
VBP1-202ENST00000460509 TAOK2Q9UL54 1235 aa11.9□□□□□ -0.5
VBP1-202ENST00000460509 DCBLD2Q96PD2 775 aa11.89□□□□□ -0.51
VBP1-202ENST00000460509 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.89□□□□□ -0.51
VBP1-202ENST00000460509 BBXQ8WY36 941 aaPredicted RBP11.88□□□□□ -0.51
VBP1-202ENST00000460509 PLCB2Q00722 1185 aa11.87□□□□□ -0.51
VBP1-202ENST00000460509 CCDC61Q9Y6R9 512 aa11.86□□□□□ -0.51
VBP1-202ENST00000460509 VGFO15240 615 aaPredicted RBP11.84□□□□□ -0.51
VBP1-202ENST00000460509 STK25O00506 426 aa11.82□□□□□ -0.52
VBP1-202ENST00000460509 CFAP44Q96MT7 982 aa11.82□□□□□ -0.52
VBP1-202ENST00000460509 PAXIP1Q6ZW49 1069 aaPredicted RBP11.81□□□□□ -0.52
VBP1-202ENST00000460509 HAP1P54257 671 aaPredicted RBP11.8□□□□□ -0.52
VBP1-202ENST00000460509 ZNF467Q7Z7K2 595 aaPredicted RBP11.8□□□□□ -0.52
VBP1-202ENST00000460509 HS6ST3Q8IZP7 471 aa11.8□□□□□ -0.52
VBP1-202ENST00000460509 PCDHB8Q9UN66 801 aa11.8□□□□□ -0.52
VBP1-202ENST00000460509 PCDHB13Q9Y5F0 798 aa11.8□□□□□ -0.52
VBP1-202ENST00000460509 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.79□□□□□ -0.52
VBP1-202ENST00000460509 ZFP91Q96JP5 570 aaPredicted RBP11.79□□□□□ -0.52
VBP1-202ENST00000460509 STK24Q9Y6E0 443 aa11.78□□□□□ -0.52
VBP1-202ENST00000460509 MS4A3Q96HJ5 214 aa11.77□□□□□ -0.53
VBP1-202ENST00000460509 MAP3K13O43283 966 aa11.76□□□□□ -0.53
VBP1-202ENST00000460509 BCL11BQ9C0K0 894 aaPredicted RBP11.75□□□□□ -0.53
VBP1-202ENST00000460509 SPRYD3Q8NCJ5 442 aa11.74□□□□□ -0.53
VBP1-202ENST00000460509 KIF12Q96FN5 646 aa11.74□□□□□ -0.53
VBP1-202ENST00000460509 PDAP1Q13442 181 aaKnown RBP11.71□□□□□ -0.53
VBP1-202ENST00000460509 IFNL1Q8IU54 200 aa11.71□□□□□ -0.53
VBP1-202ENST00000460509 SGIP1Q9BQI5 828 aa11.71□□□□□ -0.53
VBP1-202ENST00000460509 PELP1Q8IZL8 1130 aaKnown RBP11.7□□□□□ -0.54
VBP1-202ENST00000460509 PSEN1P49768 467 aa11.69□□□□□ -0.54
VBP1-202ENST00000460509 NKX1-1Q15270 411 aaPredicted RBP11.64□□□□□ -0.55
VBP1-202ENST00000460509 ATMINO43313 823 aaPredicted RBP11.63□□□□□ -0.55
VBP1-202ENST00000460509 ASTLQ6HA08 431 aaPredicted RBP11.63□□□□□ -0.55
VBP1-202ENST00000460509 POTEB2H3BUK9 544 aa11.62□□□□□ -0.55
VBP1-202ENST00000460509 DNAJC5Q9H3Z4 198 aa11.62□□□□□ -0.55
VBP1-202ENST00000460509 TRPC6Q9Y210 931 aa11.62□□□□□ -0.55
VBP1-202ENST00000460509 ATN1P54259 1190 aaPredicted RBP11.57□□□□□ -0.56
VBP1-202ENST00000460509 CABP2Q9NPB3 220 aa11.57□□□□□ -0.56
VBP1-202ENST00000460509 GTPBP6O43824 516 aaPredicted RBP11.56□□□□□ -0.56
VBP1-202ENST00000460509 TSHZ2Q9NRE2 1034 aa11.56□□□□□ -0.56
VBP1-202ENST00000460509 METRNQ9UJH8 293 aa11.56□□□□□ -0.56
VBP1-202ENST00000460509 BMP2KQ9NSY1 1161 aaPredicted RBP11.55□□□□□ -0.56
VBP1-202ENST00000460509 OTUD5Q96G74 571 aa11.54□□□□□ -0.56
VBP1-202ENST00000460509 TMEM106CQ9BVX2 250 aa11.54□□□□□ -0.56
VBP1-202ENST00000460509 SLC39A7Q92504 469 aa11.53□□□□□ -0.56
VBP1-202ENST00000460509 RYDENQ9NUL5 291 aaKnown RBP11.53□□□□□ -0.56
VBP1-202ENST00000460509 GOLGA2Q08379 1002 aa11.52□□□□□ -0.57
VBP1-202ENST00000460509 EFCAB3Q8N7B9 438 aa11.52□□□□□ -0.57
VBP1-202ENST00000460509 C7P10643 843 aa11.51□□□□□ -0.57
VBP1-202ENST00000460509 VSIG10Q8N0Z9 540 aa11.51□□□□□ -0.57
VBP1-202ENST00000460509 TIE1P35590 1138 aa11.48□□□□□ -0.57
VBP1-202ENST00000460509 POTEJP0CG39 1038 aa11.47□□□□□ -0.57
VBP1-202ENST00000460509 TTLL13PA6NNM8 815 aa11.46□□□□□ -0.57
VBP1-202ENST00000460509 MFRPQ9BY79 579 aa11.46□□□□□ -0.57
VBP1-202ENST00000460509 PHF8Q9UPP1 1060 aa11.44□□□□□ -0.58
VBP1-202ENST00000460509 KDM2AQ9Y2K7 1162 aa11.44□□□□□ -0.58
VBP1-202ENST00000460509 POTEFA5A3E0 1075 aa11.43□□□□□ -0.58
VBP1-202ENST00000460509 SOX12O15370 315 aa11.43□□□□□ -0.58
VBP1-202ENST00000460509 MKRN3Q13064 507 aaKnown RBP11.43□□□□□ -0.58
VBP1-202ENST00000460509 NLRP6P59044 892 aa11.42□□□□□ -0.58
VBP1-202ENST00000460509 TRIM35Q9UPQ4 493 aa11.39□□□□□ -0.59
VBP1-202ENST00000460509 COLQQ9Y215 455 aaPredicted RBP11.37□□□□□ -0.59
VBP1-202ENST00000460509 FBXO22Q8NEZ5 403 aa11.36□□□□□ -0.59
VBP1-202ENST00000460509 PPP1R37O75864 691 aa11.34□□□□□ -0.59
VBP1-202ENST00000460509 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.33□□□□□ -0.6
VBP1-202ENST00000460509 SEC24BO95487 1268 aa11.32□□□□□ -0.6
VBP1-202ENST00000460509 MAMSTRQ6ZN01 415 aa11.3□□□□□ -0.6
VBP1-202ENST00000460509 MS4A4AQ96JQ5 239 aa11.3□□□□□ -0.6
VBP1-202ENST00000460509 IER5LQ5T953 404 aa11.29□□□□□ -0.6
VBP1-202ENST00000460509 CADPS2Q86UW7 1296 aa11.27□□□□□ -0.61
VBP1-202ENST00000460509 SCUBE2Q9NQ36 999 aa11.27□□□□□ -0.61
VBP1-202ENST00000460509 POTEMA6NI47 508 aa11.26□□□□□ -0.61
VBP1-202ENST00000460509 WDR70Q9NW82 654 aa11.24□□□□□ -0.61
VBP1-202ENST00000460509 BCANQ96GW7 911 aa11.22□□□□□ -0.61
VBP1-202ENST00000460509 DPY19L2Q6NUT2 758 aa11.21□□□□□ -0.61
VBP1-202ENST00000460509 PLCG2P16885 1265 aa11.2□□□□□ -0.62
VBP1-202ENST00000460509 IRX5P78411 483 aaPredicted RBP11.2□□□□□ -0.62
VBP1-202ENST00000460509 POTEGQ6S5H5 508 aa11.18□□□□□ -0.62
VBP1-202ENST00000460509 OCEL1Q9H607 264 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms