RNA–Protein interactions for RNA: ENST00000460328.5

TTC3-211, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-211ENST00000460328 PHF12Q96QT6 1004 aa11.86□□□□□ -0.51
TTC3-211ENST00000460328 RASEFQ8IZ41 740 aa11.84□□□□□ -0.51
TTC3-211ENST00000460328 NUBP1P53384 320 aa11.79□□□□□ -0.52
TTC3-211ENST00000460328 CCDC61Q9Y6R9 512 aa11.78□□□□□ -0.52
TTC3-211ENST00000460328 KLHL34Q8N239 644 aa11.76□□□□□ -0.53
TTC3-211ENST00000460328 FAM212AQ96EL1 285 aa11.71□□□□□ -0.53
TTC3-211ENST00000460328 MS4A3Q96HJ5 214 aa11.71□□□□□ -0.53
TTC3-211ENST00000460328 IFNLR1Q8IU57 520 aaPredicted RBP11.69□□□□□ -0.54
TTC3-211ENST00000460328 ASTLQ6HA08 431 aaPredicted RBP11.68□□□□□ -0.54
TTC3-211ENST00000460328 KIF12Q96FN5 646 aa11.68□□□□□ -0.54
TTC3-211ENST00000460328 POTEB2H3BUK9 544 aa11.67□□□□□ -0.54
TTC3-211ENST00000460328 PELP1Q8IZL8 1130 aaKnown RBP11.67□□□□□ -0.54
TTC3-211ENST00000460328 OTUD5Q96G74 571 aa11.67□□□□□ -0.54
TTC3-211ENST00000460328 MAP3K13O43283 966 aa11.64□□□□□ -0.55
TTC3-211ENST00000460328 DCAF8Q5TAQ9 597 aa11.64□□□□□ -0.55
TTC3-211ENST00000460328 ATMINO43313 823 aaPredicted RBP11.63□□□□□ -0.55
TTC3-211ENST00000460328 SLC39A7Q92504 469 aa11.61□□□□□ -0.55
TTC3-211ENST00000460328 METRNQ9UJH8 293 aa11.6□□□□□ -0.55
TTC3-211ENST00000460328 C7P10643 843 aa11.59□□□□□ -0.55
TTC3-211ENST00000460328 SPOCK2Q92563 424 aa11.59□□□□□ -0.55
TTC3-211ENST00000460328 PCDHB13Q9Y5F0 798 aa11.57□□□□□ -0.56
TTC3-211ENST00000460328 PYGBP11216 843 aa11.56□□□□□ -0.56
TTC3-211ENST00000460328 GSE1Q14687 1217 aa11.56□□□□□ -0.56
TTC3-211ENST00000460328 TRPC6Q9Y210 931 aa11.56□□□□□ -0.56
TTC3-211ENST00000460328 SGIP1Q9BQI5 828 aa11.54□□□□□ -0.56
TTC3-211ENST00000460328 ATN1P54259 1190 aaPredicted RBP11.52□□□□□ -0.57
TTC3-211ENST00000460328 IFNL1Q8IU54 200 aa11.51□□□□□ -0.57
TTC3-211ENST00000460328 CIZ1Q9ULV3 898 aaPredicted RBP11.5□□□□□ -0.57
TTC3-211ENST00000460328 BMP2KQ9NSY1 1161 aaPredicted RBP11.49□□□□□ -0.57
TTC3-211ENST00000460328 POTEJP0CG39 1038 aa11.48□□□□□ -0.57
TTC3-211ENST00000460328 TIE1P35590 1138 aa11.48□□□□□ -0.57
TTC3-211ENST00000460328 MAMSTRQ6ZN01 415 aa11.47□□□□□ -0.57
TTC3-211ENST00000460328 TTLL13PA6NNM8 815 aa11.43□□□□□ -0.58
TTC3-211ENST00000460328 PCDHB8Q9UN66 801 aa11.43□□□□□ -0.58
TTC3-211ENST00000460328 POTEMA6NI47 508 aa11.41□□□□□ -0.58
TTC3-211ENST00000460328 CHRM1P11229 460 aaPredicted RBP11.41□□□□□ -0.58
TTC3-211ENST00000460328 POTEFA5A3E0 1075 aa11.4□□□□□ -0.58
TTC3-211ENST00000460328 SCUBE2Q9NQ36 999 aa11.4□□□□□ -0.58
TTC3-211ENST00000460328 PLSCR2Q9NRY7 297 aa11.4□□□□□ -0.58
TTC3-211ENST00000460328 TMEM106CQ9BVX2 250 aa11.38□□□□□ -0.59
TTC3-211ENST00000460328 POTEGQ6S5H5 508 aa11.37□□□□□ -0.59
TTC3-211ENST00000460328 ZNF467Q7Z7K2 595 aaPredicted RBP11.37□□□□□ -0.59
TTC3-211ENST00000460328 TRIM35Q9UPQ4 493 aa11.37□□□□□ -0.59
TTC3-211ENST00000460328 IER5LQ5T953 404 aa11.32□□□□□ -0.6
TTC3-211ENST00000460328 TRIM41Q8WV44 630 aa11.31□□□□□ -0.6
TTC3-211ENST00000460328 COLQQ9Y215 455 aaPredicted RBP11.31□□□□□ -0.6
TTC3-211ENST00000460328 SEC24BO95487 1268 aa11.3□□□□□ -0.6
TTC3-211ENST00000460328 LCE2DQ5TA82 110 aaPredicted RBP11.28□□□□□ -0.6
TTC3-211ENST00000460328 PCDH10Q9P2E7 1040 aa11.28□□□□□ -0.6
TTC3-211ENST00000460328 PSEN1P49768 467 aa11.27□□□□□ -0.61
TTC3-211ENST00000460328 PDAP1Q13442 181 aaKnown RBP11.25□□□□□ -0.61
TTC3-211ENST00000460328 FAM163AQ96GL9 167 aaPredicted RBP11.23□□□□□ -0.61
TTC3-211ENST00000460328 RNF25Q96BH1 459 aaPredicted RBP11.21□□□□□ -0.61
TTC3-211ENST00000460328 GOLGA2Q08379 1002 aa11.2□□□□□ -0.62
TTC3-211ENST00000460328 PLCG2P16885 1265 aa11.19□□□□□ -0.62
TTC3-211ENST00000460328 IRX5P78411 483 aaPredicted RBP11.19□□□□□ -0.62
TTC3-211ENST00000460328 RIOK3O14730 519 aaKnown RBP11.17□□□□□ -0.62
TTC3-211ENST00000460328 MKRN3Q13064 507 aaKnown RBP11.16□□□□□ -0.62
TTC3-211ENST00000460328 PKD2Q13563 968 aa11.16□□□□□ -0.62
TTC3-211ENST00000460328 ECM2O94769 699 aaPredicted RBP11.15□□□□□ -0.62
TTC3-211ENST00000460328 CABP2Q9NPB3 220 aa11.15□□□□□ -0.62
TTC3-211ENST00000460328 OCEL1Q9H607 264 aa11.14□□□□□ -0.63
TTC3-211ENST00000460328 VGFO15240 615 aaPredicted RBP11.11□□□□□ -0.63
TTC3-211ENST00000460328 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.1□□□□□ -0.63
TTC3-211ENST00000460328 SLAIN1Q8ND83 568 aa11.1□□□□□ -0.63
TTC3-211ENST00000460328 ZFP91Q96JP5 570 aaPredicted RBP11.1□□□□□ -0.63
TTC3-211ENST00000460328 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.09□□□□□ -0.632e-7■■■□□ 18.2
TTC3-211ENST00000460328 PDCD7Q8N8D1 485 aaKnown RBP11.08□□□□□ -0.64
TTC3-211ENST00000460328 RGL2O15211 777 aa11.07□□□□□ -0.64
TTC3-211ENST00000460328 EFCAB3Q8N7B9 438 aa11.05□□□□□ -0.64
TTC3-211ENST00000460328 TAOK2Q9UL54 1235 aa11.03□□□□□ -0.64
TTC3-211ENST00000460328 ILDR1Q86SU0 546 aaPredicted RBP11.02□□□□□ -0.65
TTC3-211ENST00000460328 ST18O60284 1047 aa11.01□□□□□ -0.65
TTC3-211ENST00000460328 BCL11BQ9C0K0 894 aaPredicted RBP11□□□□□ -0.65
TTC3-211ENST00000460328 DPY19L2Q6NUT2 758 aa10.99□□□□□ -0.65
TTC3-211ENST00000460328 CDAN1Q8IWY9 1227 aa10.99□□□□□ -0.65
TTC3-211ENST00000460328 STK24Q9Y6E0 443 aa10.99□□□□□ -0.65
TTC3-211ENST00000460328 STK25O00506 426 aa10.97□□□□□ -0.65
TTC3-211ENST00000460328 L3MBTL3Q96JM7 780 aaPredicted RBP10.97□□□□□ -0.65
TTC3-211ENST00000460328 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.97□□□□□ -0.65
TTC3-211ENST00000460328 SNPHO15079 494 aa10.94□□□□□ -0.66
TTC3-211ENST00000460328 SOX12O15370 315 aa10.94□□□□□ -0.66
TTC3-211ENST00000460328 TMEM121BQ9BXQ6 578 aaPredicted RBP10.94□□□□□ -0.66
TTC3-211ENST00000460328 C3orf67Q6ZVT6 689 aa10.93□□□□□ -0.66
TTC3-211ENST00000460328 PHF8Q9UPP1 1060 aa10.93□□□□□ -0.66
TTC3-211ENST00000460328 G3V3G9 751 aa10.9□□□□□ -0.66
TTC3-211ENST00000460328 BOLA1Q9Y3E2 137 aa10.9□□□□□ -0.66
TTC3-211ENST00000460328 MS4A4AQ96JQ5 239 aa10.89□□□□□ -0.67
TTC3-211ENST00000460328 MFRPQ9BY79 579 aa10.86□□□□□ -0.67
TTC3-211ENST00000460328 NLRP6P59044 892 aa10.85□□□□□ -0.67
TTC3-211ENST00000460328 FBXO22Q8NEZ5 403 aa10.84□□□□□ -0.67
TTC3-211ENST00000460328 MICALL2Q8IY33 904 aa10.82□□□□□ -0.68
TTC3-211ENST00000460328 CHGAP10645 457 aaKnown RBP10.81□□□□□ -0.68
TTC3-211ENST00000460328 HS6ST3Q8IZP7 471 aa10.81□□□□□ -0.68
TTC3-211ENST00000460328 MARVELD3Q96A59 401 aa10.79□□□□□ -0.68
TTC3-211ENST00000460328 DCAF8L2P0C7V8 631 aa10.74□□□□□ -0.69
TTC3-211ENST00000460328 EMP3P54852 163 aa10.73□□□□□ -0.69
TTC3-211ENST00000460328 SPNS2Q8IVW8 549 aa10.73□□□□□ -0.69
TTC3-211ENST00000460328 TMEM92Q6UXU6 159 aa10.72□□□□□ -0.69
TTC3-211ENST00000460328 MMRN1Q13201 1228 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms