RNA–Protein interactions for RNA: ENST00000458806.1

SCARNA18B-201, small Cajal body-specific RNA 18B, humanhuman

BASIC

Gene SCARNA18B, Length 135 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18B-201ENST00000458806 SLAIN1Q8ND83 568 aa4.92□□□□□ -1.62
SCARNA18B-201ENST00000458806 PABPN1Q86U42 306 aaKnown RBP eCLIP4.9□□□□□ -1.63
SCARNA18B-201ENST00000458806 SEC24BO95487 1268 aa4.88□□□□□ -1.63
SCARNA18B-201ENST00000458806 MARVELD3Q96A59 401 aa4.88□□□□□ -1.63
SCARNA18B-201ENST00000458806 SNPHO15079 494 aa4.87□□□□□ -1.63
SCARNA18B-201ENST00000458806 ATN1P54259 1190 aaPredicted RBP4.87□□□□□ -1.63
SCARNA18B-201ENST00000458806 MS4A3Q96HJ5 214 aa4.87□□□□□ -1.63
SCARNA18B-201ENST00000458806 POTEFA5A3E0 1075 aa4.86□□□□□ -1.63
SCARNA18B-201ENST00000458806 RNF166Q96A37 237 aaPredicted RBP4.86□□□□□ -1.63
SCARNA18B-201ENST00000458806 KRTAP3-3Q9BYR6 98 aa4.85□□□□□ -1.63
SCARNA18B-201ENST00000458806 KRTAP3-2Q9BYR7 98 aa4.85□□□□□ -1.63
SCARNA18B-201ENST00000458806 EMP3P54852 163 aa4.82□□□□□ -1.64
SCARNA18B-201ENST00000458806 COLQQ9Y215 455 aaPredicted RBP4.78□□□□□ -1.64
SCARNA18B-201ENST00000458806 NPM1P06748 294 aaKnown RBP eCLIP4.77□□□□□ -1.65
SCARNA18B-201ENST00000458806 HS3ST6Q96QI5 342 aa4.77□□□□□ -1.65
SCARNA18B-201ENST00000458806 CREBZFQ9NS37 354 aa4.76□□□□□ -1.65
SCARNA18B-201ENST00000458806 MYT1LQ9UL68 1186 aa4.76□□□□□ -1.65
SCARNA18B-201ENST00000458806 FAM205CA6NFA0 338 aa4.75□□□□□ -1.65
SCARNA18B-201ENST00000458806 BMP2KQ9NSY1 1161 aaPredicted RBP4.74□□□□□ -1.65
SCARNA18B-201ENST00000458806 MKRN4PQ13434 485 aaPredicted RBP4.72□□□□□ -1.65
SCARNA18B-201ENST00000458806 TIE1P35590 1138 aa4.71□□□□□ -1.66
SCARNA18B-201ENST00000458806 IER5LQ5T953 404 aa4.71□□□□□ -1.66
SCARNA18B-201ENST00000458806 POTEB3A0JP26 581 aa4.68□□□□□ -1.66
SCARNA18B-201ENST00000458806 POTEBQ6S5H4 581 aa4.68□□□□□ -1.66
SCARNA18B-201ENST00000458806 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.67□□□□□ -1.66
SCARNA18B-201ENST00000458806 PLA2G2EQ9NZK7 142 aa4.67□□□□□ -1.66
SCARNA18B-201ENST00000458806 STAG3Q9UJ98 1225 aa4.66□□□□□ -1.66
SCARNA18B-201ENST00000458806 PLCG2P16885 1265 aa4.65□□□□□ -1.67
SCARNA18B-201ENST00000458806 KCNA4P22459 653 aa4.65□□□□□ -1.67
SCARNA18B-201ENST00000458806 PTGER2P43116 358 aa4.65□□□□□ -1.67
SCARNA18B-201ENST00000458806 FOXD4L1Q9NU39 408 aa4.65□□□□□ -1.67
SCARNA18B-201ENST00000458806 TTLL13PA6NNM8 815 aa4.64□□□□□ -1.67
SCARNA18B-201ENST00000458806 IRX2Q9BZI1 471 aaPredicted RBP4.63□□□□□ -1.67
SCARNA18B-201ENST00000458806 TRIM35Q9UPQ4 493 aa4.63□□□□□ -1.67
SCARNA18B-201ENST00000458806 TRPC6Q9Y210 931 aa4.62□□□□□ -1.67
SCARNA18B-201ENST00000458806 KIF12Q96FN5 646 aa4.61□□□□□ -1.67
SCARNA18B-201ENST00000458806 ATXN8OSP0DMR3 200 aa4.6□□□□□ -1.67
SCARNA18B-201ENST00000458806 TSPYL2Q9H2G4 693 aaPredicted RBP4.6□□□□□ -1.67
SCARNA18B-201ENST00000458806 CCDC61Q9Y6R9 512 aa4.58□□□□□ -1.68
SCARNA18B-201ENST00000458806 ERBB3P21860 1342 aa4.55□□□□□ -1.68
SCARNA18B-201ENST00000458806 MNX1P50219 401 aaPredicted RBP4.55□□□□□ -1.68
SCARNA18B-201ENST00000458806 MAP3K13O43283 966 aa4.54□□□□□ -1.68
SCARNA18B-201ENST00000458806 C3orf67Q6ZVT6 689 aa4.53□□□□□ -1.68
SCARNA18B-201ENST00000458806 RGS20O76081 388 aa4.51□□□□□ -1.69
SCARNA18B-201ENST00000458806 IRX5P78411 483 aaPredicted RBP4.5□□□□□ -1.69
SCARNA18B-201ENST00000458806 OCEL1Q9H607 264 aa4.5□□□□□ -1.69
SCARNA18B-201ENST00000458806 HCSTQ9UBK5 93 aa4.5□□□□□ -1.69
SCARNA18B-201ENST00000458806 Q6ZNB5 142 aa4.49□□□□□ -1.69
SCARNA18B-201ENST00000458806 ZNF710Q8N1W2 664 aa4.48□□□□□ -1.69
SCARNA18B-201ENST00000458806 VARS2Q5ST30 1063 aaKnown RBP4.47□□□□□ -1.69
SCARNA18B-201ENST00000458806 HOXB1P14653 301 aaPredicted RBP4.46□□□□□ -1.7
SCARNA18B-201ENST00000458806 ANKRD13DQ6ZTN6 518 aa4.46□□□□□ -1.7
SCARNA18B-201ENST00000458806 ZNF687Q8N1G0 1237 aa4.44□□□□□ -1.7
SCARNA18B-201ENST00000458806 SGIP1Q9BQI5 828 aa4.44□□□□□ -1.7
SCARNA18B-201ENST00000458806 TMEM106CQ9BVX2 250 aa4.44□□□□□ -1.7
SCARNA18B-201ENST00000458806 LOC100996750A0A140TA64 210 aa4.43□□□□□ -1.7
SCARNA18B-201ENST00000458806 KRTAP4-6Q9BYQ5 205 aa4.43□□□□□ -1.7
SCARNA18B-201ENST00000458806 PCDHB13Q9Y5F0 798 aa4.43□□□□□ -1.7
SCARNA18B-201ENST00000458806 L3MBTL3Q96JM7 780 aaPredicted RBP4.41□□□□□ -1.7
SCARNA18B-201ENST00000458806 RIMBP2O15034 1052 aa4.39□□□□□ -1.71
SCARNA18B-201ENST00000458806 DOK7Q18PE1 504 aa4.38□□□□□ -1.71
SCARNA18B-201ENST00000458806 HOXB3P14651 431 aaPredicted RBP4.36□□□□□ -1.71
SCARNA18B-201ENST00000458806 LSM11P83369 360 aaKnown RBP eCLIP4.35□□□□□ -1.71
SCARNA18B-201ENST00000458806 IFNL1Q8IU54 200 aa4.33□□□□□ -1.72
SCARNA18B-201ENST00000458806 TRAF7Q6Q0C0 670 aa4.31□□□□□ -1.72
SCARNA18B-201ENST00000458806 PDCD7Q8N8D1 485 aaKnown RBP4.3□□□□□ -1.72
SCARNA18B-201ENST00000458806 LAPTM4AQ15012 233 aa4.29□□□□□ -1.72
SCARNA18B-201ENST00000458806 IFFO2Q5TF58 517 aa4.29□□□□□ -1.72
SCARNA18B-201ENST00000458806 RASEFQ8IZ41 740 aa4.29□□□□□ -1.72
SCARNA18B-201ENST00000458806 SLC4A1APQ9BWU0 796 aaKnown RBP4.29□□□□□ -1.72
SCARNA18B-201ENST00000458806 A0A0G2JS52 829 aa4.28□□□□□ -1.72
SCARNA18B-201ENST00000458806 G3V3G9 751 aa4.28□□□□□ -1.72
SCARNA18B-201ENST00000458806 DCAF8Q5TAQ9 597 aa4.28□□□□□ -1.72
SCARNA18B-201ENST00000458806 ZSWIM6Q9HCJ5 1215 aa4.28□□□□□ -1.72
SCARNA18B-201ENST00000458806 PLEKHG5O94827 1062 aa4.27□□□□□ -1.73
SCARNA18B-201ENST00000458806 GOLGA2Q08379 1002 aa4.26□□□□□ -1.73
SCARNA18B-201ENST00000458806 ZNF775Q96BV0 537 aaPredicted RBP4.26□□□□□ -1.73
SCARNA18B-201ENST00000458806 ZNF787Q6DD87 383 aa4.25□□□□□ -1.73
SCARNA18B-201ENST00000458806 PBX2P40425 430 aa4.24□□□□□ -1.73
SCARNA18B-201ENST00000458806 MKRN3Q13064 507 aaKnown RBP4.24□□□□□ -1.73
SCARNA18B-201ENST00000458806 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.22□□□□□ -1.73
SCARNA18B-201ENST00000458806 LCE2BO14633 110 aa4.21□□□□□ -1.74
SCARNA18B-201ENST00000458806 ZBTB22O15209 634 aa4.2□□□□□ -1.74
SCARNA18B-201ENST00000458806 GPR153Q6NV75 609 aa4.19□□□□□ -1.74
SCARNA18B-201ENST00000458806 KCTD12Q96CX2 325 aaKnown RBP4.19□□□□□ -1.74
SCARNA18B-201ENST00000458806 ZNF316A6NFI3 1004 aaPredicted RBP4.18□□□□□ -1.74
SCARNA18B-201ENST00000458806 SPDYE4A6NLX3 237 aa4.18□□□□□ -1.74
SCARNA18B-201ENST00000458806 ADGRD1Q6QNK2 874 aa4.18□□□□□ -1.74
SCARNA18B-201ENST00000458806 BOLA1Q9Y3E2 137 aa4.18□□□□□ -1.74
SCARNA18B-201ENST00000458806 GFRA3O60609 400 aa4.17□□□□□ -1.74
SCARNA18B-201ENST00000458806 STAC3Q96MF2 364 aa4.17□□□□□ -1.74
SCARNA18B-201ENST00000458806 PTPN5P54829 565 aa4.16□□□□□ -1.74
SCARNA18B-201ENST00000458806 STK17AQ9UEE5 414 aa4.16□□□□□ -1.74
SCARNA18B-201ENST00000458806 AXIN2Q9Y2T1 843 aa4.14□□□□□ -1.75
SCARNA18B-201ENST00000458806 FAM212AQ96EL1 285 aa4.13□□□□□ -1.75
SCARNA18B-201ENST00000458806 SUZ12Q15022 739 aaKnown RBP4.12□□□□□ -1.75
SCARNA18B-201ENST00000458806 ARSIQ5FYB1 569 aa4.12□□□□□ -1.75
SCARNA18B-201ENST00000458806 MIER1Q8N108 512 aa4.12□□□□□ -1.75
SCARNA18B-201ENST00000458806 TK2O00142 265 aa4.1□□□□□ -1.75
SCARNA18B-201ENST00000458806 DPY19L2Q6NUT2 758 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms