RNA–Protein interactions for RNA: ENST00000458477.6

PXN-206, Transcript of paxillin, humanhuman

TSL 1 (best) BASIC

Gene PXN, Length 3,807 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-206ENST00000458477 CADPSQ9ULU8 1353 aa14.86□□□□□ -0.03
PXN-206ENST00000458477 CDK11AQ9UQ88 783 aaPredicted RBP14.85□□□□□ -0.03
PXN-206ENST00000458477 CUX2O14529 1486 aa14.84□□□□□ -0.03
PXN-206ENST00000458477 ANP32EQ9BTT0 268 aa14.84□□□□□ -0.03
PXN-206ENST00000458477 SETD5Q9C0A6 1442 aa14.83□□□□□ -0.03
PXN-206ENST00000458477 CHIC2Q9UKJ5 165 aa14.83□□□□□ -0.04
PXN-206ENST00000458477 ARAP1Q96P48 1450 aa14.81□□□□□ -0.04
PXN-206ENST00000458477 CARMIL1Q5VZK9 1371 aa14.81□□□□□ -0.04
PXN-206ENST00000458477 MTUS2Q5JR59 1369 aa14.8□□□□□ -0.04
PXN-206ENST00000458477 CC2D2AQ9P2K1 1620 aa14.77□□□□□ -0.05
PXN-206ENST00000458477 ERCC6Q03468 1493 aa14.76□□□□□ -0.05
PXN-206ENST00000458477 FAM9BQ8IZU0 186 aa14.76□□□□□ -0.05
PXN-206ENST00000458477 ZNF326Q5BKZ1 582 aaKnown RBP14.76□□□□□ -0.05
PXN-206ENST00000458477 RRP7BPQ9NSQ0 103 aa14.75□□□□□ -0.05
PXN-206ENST00000458477 PDS5BQ9NTI5 1447 aa14.74□□□□□ -0.05
PXN-206ENST00000458477 PRXQ9BXM0 1461 aa14.74□□□□□ -0.05
PXN-206ENST00000458477 FHAD1B1AJZ9 1412 aa14.72□□□□□ -0.05
PXN-206ENST00000458477 RRBP1Q9P2E9 1410 aaKnown RBP14.72□□□□□ -0.05
PXN-206ENST00000458477 PPP1R15AO75807 674 aaPredicted RBP14.72□□□□□ -0.05
PXN-206ENST00000458477 DNAJC5BQ9UF47 199 aa14.71□□□□□ -0.05
PXN-206ENST00000458477 RBM19Q9Y4C8 960 aaKnown RBP14.7□□□□□ -0.06
PXN-206ENST00000458477 TIMELESSQ9UNS1 1208 aa14.69□□□□□ -0.06
PXN-206ENST00000458477 ARHGAP35Q9NRY4 1499 aa14.69□□□□□ -0.06
PXN-206ENST00000458477 CCER2I3L3R5 266 aa14.69□□□□□ -0.06
PXN-206ENST00000458477 ERICH3Q5RHP9 1530 aa14.68□□□□□ -0.06
PXN-206ENST00000458477 TOP2BQ02880 1626 aa14.68□□□□□ -0.06
PXN-206ENST00000458477 MRS2Q9HD23 443 aa14.67□□□□□ -0.06
PXN-206ENST00000458477 HMGXB3Q12766 1538 aa14.67□□□□□ -0.06
PXN-206ENST00000458477 PHLDB1Q86UU1 1377 aa14.67□□□□□ -0.06
PXN-206ENST00000458477 FANCD2Q9BXW9 1451 aa14.67□□□□□ -0.06
PXN-206ENST00000458477 CHMP7Q8WUX9 453 aaPredicted RBP14.67□□□□□ -0.06
PXN-206ENST00000458477 FHOD3Q2V2M9 1422 aa14.66□□□□□ -0.06
PXN-206ENST00000458477 EIF4G2P78344 907 aaKnown RBP eCLIP14.66□□□□□ -0.062e-7■■■■■ 49.6
PXN-206ENST00000458477 IGF1RP08069 1367 aa14.66□□□□□ -0.06
PXN-206ENST00000458477 TDRD9Q8NDG6 1382 aaKnown RBP14.64□□□□□ -0.07
PXN-206ENST00000458477 SENP3-EIF4A1A0A087X0R7 540 aa14.62□□□□□ -0.07
PXN-206ENST00000458477 PEG3Q9GZU2 1588 aa14.61□□□□□ -0.07
PXN-206ENST00000458477 CUX1P39880 1505 aa14.61□□□□□ -0.07
PXN-206ENST00000458477 NESP48681 1621 aa14.61□□□□□ -0.07
PXN-206ENST00000458477 CFTRP13569 1480 aa14.61□□□□□ -0.07
PXN-206ENST00000458477 HSPA5P11021 654 aaKnown RBP14.58□□□□□ -0.07
PXN-206ENST00000458477 LRRC9Q6ZRR7 1453 aa14.58□□□□□ -0.08
PXN-206ENST00000458477 ZNF777Q9ULD5 760 aaPredicted RBP14.58□□□□□ -0.08
PXN-206ENST00000458477 FOXD1Q16676 465 aa14.56□□□□□ -0.08
PXN-206ENST00000458477 WDR97A6NE52 1622 aa14.55□□□□□ -0.08
PXN-206ENST00000458477 B4GALNT3Q6L9W6 998 aa14.55□□□□□ -0.08
PXN-206ENST00000458477 RTL5Q5HYW3 569 aaPredicted RBP14.53□□□□□ -0.08
PXN-206ENST00000458477 SLC4A1APQ9BWU0 796 aaKnown RBP14.53□□□□□ -0.08
PXN-206ENST00000458477 FGD5Q6ZNL6 1462 aa14.53□□□□□ -0.08
PXN-206ENST00000458477 BCL11AQ9H165 835 aa14.52□□□□□ -0.08
PXN-206ENST00000458477 NBR1Q14596 966 aa14.51□□□□□ -0.09
PXN-206ENST00000458477 PPP4R2Q9NY27 417 aa14.51□□□□□ -0.09
PXN-206ENST00000458477 CCDC136Q96JN2 1154 aa14.5□□□□□ -0.09
PXN-206ENST00000458477 SALL2Q9Y467 1007 aaPredicted RBP14.5□□□□□ -0.09
PXN-206ENST00000458477 TIAM1Q13009 1591 aa14.5□□□□□ -0.09
PXN-206ENST00000458477 MYT1LQ9UL68 1186 aa14.49□□□□□ -0.09
PXN-206ENST00000458477 CCDC18Q5T9S5 1454 aa14.49□□□□□ -0.09
PXN-206ENST00000458477 FMN1Q68DA7 1419 aa14.49□□□□□ -0.09
PXN-206ENST00000458477 ANP32AP39687 249 aaKnown RBP14.48□□□□□ -0.09
PXN-206ENST00000458477 RAD54L2Q9Y4B4 1467 aa14.47□□□□□ -0.09
PXN-206ENST00000458477 NPM2Q86SE8 214 aaKnown RBP14.47□□□□□ -0.09
PXN-206ENST00000458477 TMC1Q8TDI8 760 aa14.47□□□□□ -0.09
PXN-206ENST00000458477 L3MBTL2Q969R5 705 aa14.46□□□□□ -0.1
PXN-206ENST00000458477 FGD6Q6ZV73 1430 aa14.45□□□□□ -0.1
PXN-206ENST00000458477 MAPKBP1O60336 1514 aa14.45□□□□□ -0.1
PXN-206ENST00000458477 BIVM-ERCC5R4GMW8 1640 aa14.44□□□□□ -0.1
PXN-206ENST00000458477 MPHOSPH9Q99550 1183 aa14.44□□□□□ -0.1
PXN-206ENST00000458477 KDM2AQ9Y2K7 1162 aa14.43□□□□□ -0.1
PXN-206ENST00000458477 UACAQ9BZF9 1416 aa14.4□□□□□ -0.1
PXN-206ENST00000458477 WASHC2AQ641Q2 1341 aa14.39□□□□□ -0.11
PXN-206ENST00000458477 DAXXQ9UER7 740 aaPredicted RBP14.39□□□□□ -0.11
PXN-206ENST00000458477 CASKIN1Q8WXD9 1431 aa14.38□□□□□ -0.11
PXN-206ENST00000458477 PRKRIP1Q9H875 184 aaPredicted RBP14.37□□□□□ -0.11
PXN-206ENST00000458477 ZBTB47Q9UFB7 747 aaPredicted RBP14.35□□□□□ -0.11
PXN-206ENST00000458477 PCF11O94913 1555 aaKnown RBP14.35□□□□□ -0.11
PXN-206ENST00000458477 TOPBP1Q92547 1522 aa14.35□□□□□ -0.11
PXN-206ENST00000458477 FYCO1Q9BQS8 1478 aa14.35□□□□□ -0.11
PXN-206ENST00000458477 CCDC184Q52MB2 194 aa14.34□□□□□ -0.11
PXN-206ENST00000458477 CFDP1Q9UEE9 299 aaPredicted RBP14.34□□□□□ -0.11
PXN-206ENST00000458477 MYOM3Q5VTT5 1437 aa14.33□□□□□ -0.11
PXN-206ENST00000458477 GAPVD1Q14C86 1478 aa14.33□□□□□ -0.12
PXN-206ENST00000458477 ERICH6BQ5W0A0 696 aa14.33□□□□□ -0.12
PXN-206ENST00000458477 AQRO60306 1485 aaKnown RBP eCLIP14.32□□□□□ -0.123e-6■■■□□ 18.5
PXN-206ENST00000458477 NOP58Q9Y2X3 529 aaKnown RBP14.32□□□□□ -0.12
PXN-206ENST00000458477 MAP3K1Q13233 1512 aa14.32□□□□□ -0.12
PXN-206ENST00000458477 NCOA2Q15596 1464 aa14.32□□□□□ -0.12
PXN-206ENST00000458477 POLA1P09884 1462 aaPredicted RBP14.31□□□□□ -0.12
PXN-206ENST00000458477 CARD11Q9BXL7 1154 aa14.31□□□□□ -0.12
PXN-206ENST00000458477 LAMC3Q9Y6N6 1575 aa14.31□□□□□ -0.12
PXN-206ENST00000458477 HFM1A2PYH4 1435 aa14.31□□□□□ -0.12
PXN-206ENST00000458477 FANCIQ9NVI1 1328 aa14.29□□□□□ -0.12
PXN-206ENST00000458477 NAIPQ13075 1403 aa14.28□□□□□ -0.12
PXN-206ENST00000458477 MSH5O43196 834 aa14.28□□□□□ -0.12
PXN-206ENST00000458477 CCDC7Q96M83 1385 aa14.27□□□□□ -0.12
PXN-206ENST00000458477 ZBED9Q6R2W3 1325 aa14.27□□□□□ -0.12
PXN-206ENST00000458477 DEKP35659 375 aaKnown RBP14.27□□□□□ -0.13
PXN-206ENST00000458477 TSPY4P0CV99 314 aa14.27□□□□□ -0.13
PXN-206ENST00000458477 TSPY10P0CW01 314 aa14.27□□□□□ -0.13
PXN-206ENST00000458477 MRC2Q9UBG0 1479 aa14.27□□□□□ -0.13
PXN-206ENST00000458477 PKD2Q13563 968 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms