RNA–Protein interactions for RNA: ENST00000457805.6

PTP4A2-201, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2 BASIC

Gene PTP4A2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-201ENST00000457805 POTEGQ6S5H5 508 aa17.12■□□□□ 0.33
PTP4A2-201ENST00000457805 RB1CC1Q8TDY2 1594 aa17.11■□□□□ 0.33
PTP4A2-201ENST00000457805 ASTLQ6HA08 431 aaPredicted RBP17.08■□□□□ 0.32
PTP4A2-201ENST00000457805 MS4A3Q96HJ5 214 aa17.07■□□□□ 0.32
PTP4A2-201ENST00000457805 METRNQ9UJH8 293 aa17.07■□□□□ 0.32
PTP4A2-201ENST00000457805 NACADO15069 1562 aa17.05■□□□□ 0.32
PTP4A2-201ENST00000457805 ATMINO43313 823 aaPredicted RBP17.04■□□□□ 0.32
PTP4A2-201ENST00000457805 POTEJP0CG39 1038 aa17.04■□□□□ 0.32
PTP4A2-201ENST00000457805 C7P10643 843 aa17■□□□□ 0.31
PTP4A2-201ENST00000457805 SLC39A7Q92504 469 aa17■□□□□ 0.31
PTP4A2-201ENST00000457805 PCDH10Q9P2E7 1040 aa16.91■□□□□ 0.3
PTP4A2-201ENST00000457805 MAMSTRQ6ZN01 415 aa16.9■□□□□ 0.3
PTP4A2-201ENST00000457805 MYO15BQ96JP2 1530 aa16.87■□□□□ 0.29
PTP4A2-201ENST00000457805 LCE2DQ5TA82 110 aaPredicted RBP16.87■□□□□ 0.29
PTP4A2-201ENST00000457805 TSPYL2Q9H2G4 693 aaPredicted RBP16.86■□□□□ 0.29
PTP4A2-201ENST00000457805 ZCCHC6Q5VYS8 1495 aaKnown RBP16.86■□□□□ 0.29
PTP4A2-201ENST00000457805 ATN1P54259 1190 aaPredicted RBP16.85■□□□□ 0.29
PTP4A2-201ENST00000457805 CCDC61Q9Y6R9 512 aa16.84■□□□□ 0.29
PTP4A2-201ENST00000457805 KIF12Q96FN5 646 aa16.78■□□□□ 0.28
PTP4A2-201ENST00000457805 SCUBE2Q9NQ36 999 aa16.77■□□□□ 0.28
PTP4A2-201ENST00000457805 POTEFA5A3E0 1075 aa16.76■□□□□ 0.27
PTP4A2-201ENST00000457805 FAM163AQ96GL9 167 aaPredicted RBP16.76■□□□□ 0.27
PTP4A2-201ENST00000457805 PROM2Q8N271 834 aa16.75■□□□□ 0.27
PTP4A2-201ENST00000457805 DCAF1Q9Y4B6 1507 aa16.75■□□□□ 0.27
PTP4A2-201ENST00000457805 UNC13AQ9UPW8 1703 aa16.74■□□□□ 0.27
PTP4A2-201ENST00000457805 BMP2KQ9NSY1 1161 aaPredicted RBP16.74■□□□□ 0.27
PTP4A2-201ENST00000457805 EHMT2Q96KQ7 1210 aa16.73■□□□□ 0.27
PTP4A2-201ENST00000457805 TRPC6Q9Y210 931 aa16.72■□□□□ 0.27
PTP4A2-201ENST00000457805 BICRAQ9NZM4 1560 aa16.65■□□□□ 0.26
PTP4A2-201ENST00000457805 MAP3K13O43283 966 aa16.64■□□□□ 0.25
PTP4A2-201ENST00000457805 TIE1P35590 1138 aa16.63■□□□□ 0.25
PTP4A2-201ENST00000457805 RASEFQ8IZ41 740 aa16.57■□□□□ 0.24
PTP4A2-201ENST00000457805 COLQQ9Y215 455 aaPredicted RBP16.57■□□□□ 0.24
PTP4A2-201ENST00000457805 TTLL13PA6NNM8 815 aa16.54■□□□□ 0.24
PTP4A2-201ENST00000457805 SCRIBQ14160 1630 aa16.52■□□□□ 0.23
PTP4A2-201ENST00000457805 SEC24BO95487 1268 aa16.49■□□□□ 0.23
PTP4A2-201ENST00000457805 MIER1Q8N108 512 aa16.48■□□□□ 0.23
PTP4A2-201ENST00000457805 PLEKHG5O94827 1062 aa16.47■□□□□ 0.23
PTP4A2-201ENST00000457805 CDAN1Q8IWY9 1227 aa16.43■□□□□ 0.22
PTP4A2-201ENST00000457805 TRIM35Q9UPQ4 493 aa16.43■□□□□ 0.22
PTP4A2-201ENST00000457805 IER5LQ5T953 404 aa16.42■□□□□ 0.22
PTP4A2-201ENST00000457805 SGIP1Q9BQI5 828 aa16.39■□□□□ 0.21
PTP4A2-201ENST00000457805 PCDHB13Q9Y5F0 798 aa16.37■□□□□ 0.21
PTP4A2-201ENST00000457805 SHROOM4Q9ULL8 1493 aa16.34■□□□□ 0.21
PTP4A2-201ENST00000457805 SLAIN1Q8ND83 568 aa16.31■□□□□ 0.2
PTP4A2-201ENST00000457805 ST18O60284 1047 aa16.3■□□□□ 0.2
PTP4A2-201ENST00000457805 IFNL1Q8IU54 200 aa16.28■□□□□ 0.2
PTP4A2-201ENST00000457805 NUBP1P53384 320 aa16.27■□□□□ 0.2
PTP4A2-201ENST00000457805 PLCD3Q8N3E9 789 aa16.26■□□□□ 0.19
PTP4A2-201ENST00000457805 TMEM106CQ9BVX2 250 aa16.23■□□□□ 0.19
PTP4A2-201ENST00000457805 PLCG2P16885 1265 aa16.2■□□□□ 0.18
PTP4A2-201ENST00000457805 EIF4G1Q04637 1599 aaKnown RBP16.2■□□□□ 0.18
PTP4A2-201ENST00000457805 CC2D2AQ9P2K1 1620 aa16.19■□□□□ 0.18
PTP4A2-201ENST00000457805 IRX5P78411 483 aaPredicted RBP16.17■□□□□ 0.18
PTP4A2-201ENST00000457805 ZBTB47Q9UFB7 747 aaPredicted RBP16.17■□□□□ 0.18
PTP4A2-201ENST00000457805 CECR2Q9BXF3 1484 aa16.12■□□□□ 0.17
PTP4A2-201ENST00000457805 FAM212AQ96EL1 285 aa16.12■□□□□ 0.17
PTP4A2-201ENST00000457805 MMRN1Q13201 1228 aa16.07■□□□□ 0.16
PTP4A2-201ENST00000457805 SPNS2Q8IVW8 549 aa16.06■□□□□ 0.16
PTP4A2-201ENST00000457805 TMEM121BQ9BXQ6 578 aaPredicted RBP16.06■□□□□ 0.16
PTP4A2-201ENST00000457805 OCEL1Q9H607 264 aa16.06■□□□□ 0.16
PTP4A2-201ENST00000457805 SNPHO15079 494 aa15.98■□□□□ 0.15
PTP4A2-201ENST00000457805 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.98■□□□□ 0.15
PTP4A2-201ENST00000457805 MARVELD3Q96A59 401 aa15.97■□□□□ 0.15
PTP4A2-201ENST00000457805 PYGBP11216 843 aa15.94■□□□□ 0.14
PTP4A2-201ENST00000457805 PCDHB8Q9UN66 801 aa15.92■□□□□ 0.14
PTP4A2-201ENST00000457805 DCAF8Q5TAQ9 597 aa15.9■□□□□ 0.14
PTP4A2-201ENST00000457805 PDCD7Q8N8D1 485 aaKnown RBP15.85■□□□□ 0.13
PTP4A2-201ENST00000457805 NCAPD3P42695 1498 aa15.78■□□□□ 0.12
PTP4A2-201ENST00000457805 ATAD2BQ9ULI0 1458 aa15.78■□□□□ 0.12
PTP4A2-201ENST00000457805 EMP3P54852 163 aa15.78■□□□□ 0.12
PTP4A2-201ENST00000457805 SMARCA4P51532 1647 aa15.77■□□□□ 0.12
PTP4A2-201ENST00000457805 C3orf67Q6ZVT6 689 aa15.77■□□□□ 0.12
PTP4A2-201ENST00000457805 POTEB3A0JP26 581 aa15.75■□□□□ 0.11
PTP4A2-201ENST00000457805 POTEBQ6S5H4 581 aa15.75■□□□□ 0.11
PTP4A2-201ENST00000457805 KRTAP3-3Q9BYR6 98 aa15.74■□□□□ 0.11
PTP4A2-201ENST00000457805 KRTAP3-2Q9BYR7 98 aa15.74■□□□□ 0.11
PTP4A2-201ENST00000457805 FKBP8Q14318 412 aa15.73■□□□□ 0.11
PTP4A2-201ENST00000457805 L3MBTL3Q96JM7 780 aaPredicted RBP15.73■□□□□ 0.11
PTP4A2-201ENST00000457805 BAZ1AQ9NRL2 1556 aaPredicted RBP15.71■□□□□ 0.11
PTP4A2-201ENST00000457805 HS3ST6Q96QI5 342 aa15.71■□□□□ 0.11
PTP4A2-201ENST00000457805 MKRN3Q13064 507 aaKnown RBP15.7■□□□□ 0.1
PTP4A2-201ENST00000457805 MROH2BQ7Z745 1585 aa15.69■□□□□ 0.1
PTP4A2-201ENST00000457805 SMARCA2P51531 1590 aa15.68■□□□□ 0.1
PTP4A2-201ENST00000457805 ZNF467Q7Z7K2 595 aaPredicted RBP15.68■□□□□ 0.1
PTP4A2-201ENST00000457805 FAM205CA6NFA0 338 aa15.67■□□□□ 0.1
PTP4A2-201ENST00000457805 GOLGA2Q08379 1002 aa15.67■□□□□ 0.1
PTP4A2-201ENST00000457805 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.65■□□□□ 0.1
PTP4A2-201ENST00000457805 HMGXB3Q12766 1538 aa15.62■□□□□ 0.09
PTP4A2-201ENST00000457805 GSE1Q14687 1217 aa15.61■□□□□ 0.09
PTP4A2-201ENST00000457805 BAZ1BQ9UIG0 1483 aaKnown RBP15.6■□□□□ 0.09
PTP4A2-201ENST00000457805 PEG3Q9GZU2 1588 aa15.6■□□□□ 0.09
PTP4A2-201ENST00000457805 PSEN1P49768 467 aa15.59■□□□□ 0.09
PTP4A2-201ENST00000457805 ILDR1Q86SU0 546 aaPredicted RBP15.59■□□□□ 0.09
PTP4A2-201ENST00000457805 CHRM1P11229 460 aaPredicted RBP15.58■□□□□ 0.08
PTP4A2-201ENST00000457805 FBXO3Q9UK99 471 aa15.56■□□□□ 0.08
PTP4A2-201ENST00000457805 DPY19L2Q6NUT2 758 aa15.53■□□□□ 0.08
PTP4A2-201ENST00000457805 HOXB3P14651 431 aaPredicted RBP15.51■□□□□ 0.07
PTP4A2-201ENST00000457805 NESP48681 1621 aa15.5■□□□□ 0.07
PTP4A2-201ENST00000457805 KLHL34Q8N239 644 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms