RNA–Protein interactions for RNA: ENST00000457431.1

FARP1-206, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-206ENST00000457431 CCDC61Q9Y6R9 512 aa15.06■□□□□ 0
FARP1-206ENST00000457431 VASPP50552 380 aaPredicted RBP15.02■□□□□ -0
FARP1-206ENST00000457431 NUBP1P53384 320 aa15.02■□□□□ -0
FARP1-206ENST00000457431 MS4A3Q96HJ5 214 aa15.02■□□□□ -0
FARP1-206ENST00000457431 KIF12Q96FN5 646 aa14.96□□□□□ -0.01
FARP1-206ENST00000457431 KLHL34Q8N239 644 aa14.91□□□□□ -0.02
FARP1-206ENST00000457431 MAP3K13O43283 966 aa14.9□□□□□ -0.02
FARP1-206ENST00000457431 FAM212AQ96EL1 285 aa14.9□□□□□ -0.02
FARP1-206ENST00000457431 LHX8Q68G74 356 aa14.88□□□□□ -0.03
FARP1-206ENST00000457431 SLC24A1O60721 1099 aa14.86□□□□□ -0.03
FARP1-206ENST00000457431 DCAF8Q5TAQ9 597 aa14.84□□□□□ -0.03
FARP1-206ENST00000457431 PELP1Q8IZL8 1130 aaKnown RBP14.84□□□□□ -0.03
FARP1-206ENST00000457431 TRPC6Q9Y210 931 aa14.83□□□□□ -0.04
FARP1-206ENST00000457431 ATMINO43313 823 aaPredicted RBP14.81□□□□□ -0.04
FARP1-206ENST00000457431 ASTLQ6HA08 431 aaPredicted RBP14.8□□□□□ -0.04
FARP1-206ENST00000457431 PCDHB13Q9Y5F0 798 aa14.79□□□□□ -0.04
FARP1-206ENST00000457431 IFNLR1Q8IU57 520 aaPredicted RBP14.78□□□□□ -0.04
FARP1-206ENST00000457431 BMP2KQ9NSY1 1161 aaPredicted RBP14.75□□□□□ -0.05
FARP1-206ENST00000457431 PYGBP11216 843 aa14.74□□□□□ -0.05
FARP1-206ENST00000457431 ATN1P54259 1190 aaPredicted RBP14.74□□□□□ -0.05
FARP1-206ENST00000457431 IFNL1Q8IU54 200 aa14.72□□□□□ -0.05
FARP1-206ENST00000457431 SGIP1Q9BQI5 828 aa14.72□□□□□ -0.05
FARP1-206ENST00000457431 TIE1P35590 1138 aa14.69□□□□□ -0.06
FARP1-206ENST00000457431 METRNQ9UJH8 293 aa14.69□□□□□ -0.06
FARP1-206ENST00000457431 SPOCK2Q92563 424 aa14.68□□□□□ -0.06
FARP1-206ENST00000457431 GSE1Q14687 1217 aa14.67□□□□□ -0.06
FARP1-206ENST00000457431 SLC39A7Q92504 469 aa14.66□□□□□ -0.06
FARP1-206ENST00000457431 TTLL13PA6NNM8 815 aa14.65□□□□□ -0.06
FARP1-206ENST00000457431 POTEB2H3BUK9 544 aa14.65□□□□□ -0.06
FARP1-206ENST00000457431 C7P10643 843 aa14.63□□□□□ -0.07
FARP1-206ENST00000457431 PCDHB8Q9UN66 801 aa14.61□□□□□ -0.07
FARP1-206ENST00000457431 CIZ1Q9ULV3 898 aaPredicted RBP14.59□□□□□ -0.07
FARP1-206ENST00000457431 TMEM106CQ9BVX2 250 aa14.58□□□□□ -0.08
FARP1-206ENST00000457431 TRIM35Q9UPQ4 493 aa14.57□□□□□ -0.08
FARP1-206ENST00000457431 OTUD5Q96G74 571 aa14.52□□□□□ -0.09
FARP1-206ENST00000457431 POTEFA5A3E0 1075 aa14.51□□□□□ -0.09
FARP1-206ENST00000457431 CHRM1P11229 460 aaPredicted RBP14.5□□□□□ -0.09
FARP1-206ENST00000457431 POTEJP0CG39 1038 aa14.49□□□□□ -0.09
FARP1-206ENST00000457431 COLQQ9Y215 455 aaPredicted RBP14.48□□□□□ -0.09
FARP1-206ENST00000457431 ZNF467Q7Z7K2 595 aaPredicted RBP14.47□□□□□ -0.09
FARP1-206ENST00000457431 SEC24BO95487 1268 aa14.46□□□□□ -0.09
FARP1-206ENST00000457431 IER5LQ5T953 404 aa14.44□□□□□ -0.1
FARP1-206ENST00000457431 PSEN1P49768 467 aa14.38□□□□□ -0.11
FARP1-206ENST00000457431 AMER1Q5JTC6 1135 aaPredicted RBP14.34□□□□□ -0.11
FARP1-206ENST00000457431 MAMSTRQ6ZN01 415 aa14.34□□□□□ -0.11
FARP1-206ENST00000457431 PLCG2P16885 1265 aa14.33□□□□□ -0.12
FARP1-206ENST00000457431 IRX5P78411 483 aaPredicted RBP14.33□□□□□ -0.12
FARP1-206ENST00000457431 PDAP1Q13442 181 aaKnown RBP14.32□□□□□ -0.12
FARP1-206ENST00000457431 SCUBE2Q9NQ36 999 aa14.32□□□□□ -0.12
FARP1-206ENST00000457431 TRIM41Q8WV44 630 aa14.31□□□□□ -0.12
FARP1-206ENST00000457431 GOLGA2Q08379 1002 aa14.29□□□□□ -0.12
FARP1-206ENST00000457431 RTN4Q9NQC3 1192 aaKnown RBP14.29□□□□□ -0.12
FARP1-206ENST00000457431 OCEL1Q9H607 264 aa14.27□□□□□ -0.13
FARP1-206ENST00000457431 MKRN3Q13064 507 aaKnown RBP14.25□□□□□ -0.13
FARP1-206ENST00000457431 CABP2Q9NPB3 220 aa14.22□□□□□ -0.13
FARP1-206ENST00000457431 RNF25Q96BH1 459 aaPredicted RBP14.21□□□□□ -0.13
FARP1-206ENST00000457431 PDCD7Q8N8D1 485 aaKnown RBP14.18□□□□□ -0.14
FARP1-206ENST00000457431 RIOK3O14730 519 aaKnown RBP14.17□□□□□ -0.14
FARP1-206ENST00000457431 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.17□□□□□ -0.14
FARP1-206ENST00000457431 SLAIN1Q8ND83 568 aa14.11□□□□□ -0.15
FARP1-206ENST00000457431 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.1□□□□□ -0.15
FARP1-206ENST00000457431 ZFP91Q96JP5 570 aaPredicted RBP14.1□□□□□ -0.15
FARP1-206ENST00000457431 VGFO15240 615 aaPredicted RBP14.08□□□□□ -0.16
FARP1-206ENST00000457431 ECM2O94769 699 aaPredicted RBP14.08□□□□□ -0.16
FARP1-206ENST00000457431 DPY19L2Q6NUT2 758 aa14.07□□□□□ -0.16
FARP1-206ENST00000457431 EFCAB3Q8N7B9 438 aa14.07□□□□□ -0.16
FARP1-206ENST00000457431 FAM163AQ96GL9 167 aaPredicted RBP14.07□□□□□ -0.16
FARP1-206ENST00000457431 PKD2Q13563 968 aa14.06□□□□□ -0.16
FARP1-206ENST00000457431 ILDR1Q86SU0 546 aaPredicted RBP14.06□□□□□ -0.16
FARP1-206ENST00000457431 L3MBTL3Q96JM7 780 aaPredicted RBP14.03□□□□□ -0.16
FARP1-206ENST00000457431 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.03□□□□□ -0.16
FARP1-206ENST00000457431 LCE2DQ5TA82 110 aaPredicted RBP14.02□□□□□ -0.17
FARP1-206ENST00000457431 POTEMA6NI47 508 aa14□□□□□ -0.17
FARP1-206ENST00000457431 C3orf67Q6ZVT6 689 aa14□□□□□ -0.17
FARP1-206ENST00000457431 RGL2O15211 777 aa13.98□□□□□ -0.17
FARP1-206ENST00000457431 POTEGQ6S5H5 508 aa13.98□□□□□ -0.17
FARP1-206ENST00000457431 BCL11BQ9C0K0 894 aaPredicted RBP13.96□□□□□ -0.17
FARP1-206ENST00000457431 TAOK2Q9UL54 1235 aa13.94□□□□□ -0.18
FARP1-206ENST00000457431 BOLA1Q9Y3E2 137 aa13.94□□□□□ -0.18
FARP1-206ENST00000457431 STK24Q9Y6E0 443 aa13.93□□□□□ -0.18
FARP1-206ENST00000457431 G3V3G9 751 aa13.92□□□□□ -0.18
FARP1-206ENST00000457431 STK25O00506 426 aa13.91□□□□□ -0.18
FARP1-206ENST00000457431 PHF8Q9UPP1 1060 aa13.91□□□□□ -0.18
FARP1-206ENST00000457431 SOX12O15370 315 aa13.9□□□□□ -0.18
FARP1-206ENST00000457431 MS4A4AQ96JQ5 239 aa13.88□□□□□ -0.19
FARP1-206ENST00000457431 ST18O60284 1047 aa13.86□□□□□ -0.19
FARP1-206ENST00000457431 TMEM121BQ9BXQ6 578 aaPredicted RBP13.82□□□□□ -0.2
FARP1-206ENST00000457431 SNPHO15079 494 aa13.81□□□□□ -0.2
FARP1-206ENST00000457431 NLRP6P59044 892 aa13.8□□□□□ -0.2
FARP1-206ENST00000457431 MICALL2Q8IY33 904 aa13.8□□□□□ -0.2
FARP1-206ENST00000457431 FBXO22Q8NEZ5 403 aa13.79□□□□□ -0.2
FARP1-206ENST00000457431 MFRPQ9BY79 579 aa13.78□□□□□ -0.2
FARP1-206ENST00000457431 PLSCR2Q9NRY7 297 aa13.72□□□□□ -0.21
FARP1-206ENST00000457431 TMEM92Q6UXU6 159 aa13.71□□□□□ -0.21
FARP1-206ENST00000457431 MARVELD3Q96A59 401 aa13.71□□□□□ -0.21
FARP1-206ENST00000457431 HOXB3P14651 431 aaPredicted RBP13.66□□□□□ -0.22
FARP1-206ENST00000457431 PCDH10Q9P2E7 1040 aa13.66□□□□□ -0.22
FARP1-206ENST00000457431 HS6ST3Q8IZP7 471 aa13.65□□□□□ -0.22
FARP1-206ENST00000457431 CHGAP10645 457 aaKnown RBP13.64□□□□□ -0.23
FARP1-206ENST00000457431 CDAN1Q8IWY9 1227 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms