RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 METRNQ9UJH8 293 aa12.77□□□□□ -0.37
R3HDM1-212ENST00000456040 POTEB2H3BUK9 544 aa12.76□□□□□ -0.37
R3HDM1-212ENST00000456040 ASTLQ6HA08 431 aaPredicted RBP12.76□□□□□ -0.37
R3HDM1-212ENST00000456040 PELP1Q8IZL8 1130 aaKnown RBP12.74□□□□□ -0.37
R3HDM1-212ENST00000456040 ATMINO43313 823 aaPredicted RBP12.73□□□□□ -0.37
R3HDM1-212ENST00000456040 POTEMA6NI47 508 aa12.71□□□□□ -0.37
R3HDM1-212ENST00000456040 MIER1Q8N108 512 aa12.68□□□□□ -0.38
R3HDM1-212ENST00000456040 POTEGQ6S5H5 508 aa12.67□□□□□ -0.38
R3HDM1-212ENST00000456040 SCUBE2Q9NQ36 999 aa12.67□□□□□ -0.38
R3HDM1-212ENST00000456040 PROM2Q8N271 834 aa12.65□□□□□ -0.38
R3HDM1-212ENST00000456040 CCDC61Q9Y6R9 512 aa12.65□□□□□ -0.38
R3HDM1-212ENST00000456040 PCDH10Q9P2E7 1040 aa12.64□□□□□ -0.39
R3HDM1-212ENST00000456040 KIF12Q96FN5 646 aa12.62□□□□□ -0.39
R3HDM1-212ENST00000456040 ATN1P54259 1190 aaPredicted RBP12.59□□□□□ -0.39
R3HDM1-212ENST00000456040 PLCD3Q8N3E9 789 aa12.56□□□□□ -0.4
R3HDM1-212ENST00000456040 TIE1P35590 1138 aa12.55□□□□□ -0.4
R3HDM1-212ENST00000456040 ZBTB47Q9UFB7 747 aaPredicted RBP12.55□□□□□ -0.4
R3HDM1-212ENST00000456040 SEC24BO95487 1268 aa12.54□□□□□ -0.4
R3HDM1-212ENST00000456040 FAM163AQ96GL9 167 aaPredicted RBP12.54□□□□□ -0.4
R3HDM1-212ENST00000456040 MAP3K13O43283 966 aa12.53□□□□□ -0.4
R3HDM1-212ENST00000456040 BMP2KQ9NSY1 1161 aaPredicted RBP12.53□□□□□ -0.4
R3HDM1-212ENST00000456040 POTEJP0CG39 1038 aa12.5□□□□□ -0.41
R3HDM1-212ENST00000456040 RASEFQ8IZ41 740 aa12.48□□□□□ -0.41
R3HDM1-212ENST00000456040 SGIP1Q9BQI5 828 aa12.46□□□□□ -0.41
R3HDM1-212ENST00000456040 TRPC6Q9Y210 931 aa12.43□□□□□ -0.42
R3HDM1-212ENST00000456040 PCDHB13Q9Y5F0 798 aa12.43□□□□□ -0.42
R3HDM1-212ENST00000456040 TTLL13PA6NNM8 815 aa12.42□□□□□ -0.42
R3HDM1-212ENST00000456040 IER5LQ5T953 404 aa12.41□□□□□ -0.42
R3HDM1-212ENST00000456040 FAM212AQ96EL1 285 aa12.38□□□□□ -0.43
R3HDM1-212ENST00000456040 TRIM35Q9UPQ4 493 aa12.38□□□□□ -0.43
R3HDM1-212ENST00000456040 POTEFA5A3E0 1075 aa12.37□□□□□ -0.43
R3HDM1-212ENST00000456040 COLQQ9Y215 455 aaPredicted RBP12.34□□□□□ -0.43
R3HDM1-212ENST00000456040 PLCG2P16885 1265 aa12.3□□□□□ -0.44
R3HDM1-212ENST00000456040 TMEM106CQ9BVX2 250 aa12.3□□□□□ -0.44
R3HDM1-212ENST00000456040 NUBP1P53384 320 aa12.29□□□□□ -0.44
R3HDM1-212ENST00000456040 LCE2DQ5TA82 110 aaPredicted RBP12.29□□□□□ -0.44
R3HDM1-212ENST00000456040 IFNL1Q8IU54 200 aa12.27□□□□□ -0.45
R3HDM1-212ENST00000456040 SLAIN1Q8ND83 568 aa12.27□□□□□ -0.45
R3HDM1-212ENST00000456040 DCAF8Q5TAQ9 597 aa12.23□□□□□ -0.45
R3HDM1-212ENST00000456040 CDAN1Q8IWY9 1227 aa12.22□□□□□ -0.45
R3HDM1-212ENST00000456040 FKBP8Q14318 412 aa12.18□□□□□ -0.46
R3HDM1-212ENST00000456040 OCEL1Q9H607 264 aa12.17□□□□□ -0.46
R3HDM1-212ENST00000456040 FBXO3Q9UK99 471 aa12.17□□□□□ -0.46
R3HDM1-212ENST00000456040 SNPHO15079 494 aa12.16□□□□□ -0.46
R3HDM1-212ENST00000456040 ST18O60284 1047 aa12.13□□□□□ -0.47
R3HDM1-212ENST00000456040 IRX5P78411 483 aaPredicted RBP12.13□□□□□ -0.47
R3HDM1-212ENST00000456040 PYGBP11216 843 aa12.12□□□□□ -0.47
R3HDM1-212ENST00000456040 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.12□□□□□ -0.47
R3HDM1-212ENST00000456040 GOLGA2Q08379 1002 aa12.1□□□□□ -0.47
R3HDM1-212ENST00000456040 TMEM121BQ9BXQ6 578 aaPredicted RBP12.09□□□□□ -0.47
R3HDM1-212ENST00000456040 KLHL34Q8N239 644 aa12.07□□□□□ -0.48
R3HDM1-212ENST00000456040 GSE1Q14687 1217 aa12.05□□□□□ -0.48
R3HDM1-212ENST00000456040 PCDHB8Q9UN66 801 aa12.04□□□□□ -0.48
R3HDM1-212ENST00000456040 MKRN3Q13064 507 aaKnown RBP12.03□□□□□ -0.48
R3HDM1-212ENST00000456040 ZNF467Q7Z7K2 595 aaPredicted RBP12.03□□□□□ -0.48
R3HDM1-212ENST00000456040 C3orf67Q6ZVT6 689 aa12.02□□□□□ -0.49
R3HDM1-212ENST00000456040 L3MBTL3Q96JM7 780 aaPredicted RBP12.01□□□□□ -0.49
R3HDM1-212ENST00000456040 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.92□□□□□ -0.58e-8■■■■■ 33.1
R3HDM1-212ENST00000456040 MARVELD3Q96A59 401 aa11.91□□□□□ -0.5
R3HDM1-212ENST00000456040 G3V3G9 751 aa11.9□□□□□ -0.5
R3HDM1-212ENST00000456040 CHRM1P11229 460 aaPredicted RBP11.9□□□□□ -0.5
R3HDM1-212ENST00000456040 SPNS2Q8IVW8 549 aa11.9□□□□□ -0.5
R3HDM1-212ENST00000456040 VASPP50552 380 aaPredicted RBP11.89□□□□□ -0.51
R3HDM1-212ENST00000456040 EMP3P54852 163 aa11.89□□□□□ -0.51
R3HDM1-212ENST00000456040 MMRN1Q13201 1228 aa11.89□□□□□ -0.51
R3HDM1-212ENST00000456040 PSEN1P49768 467 aa11.88□□□□□ -0.51
R3HDM1-212ENST00000456040 PDCD7Q8N8D1 485 aaKnown RBP11.87□□□□□ -0.51
R3HDM1-212ENST00000456040 PDAP1Q13442 181 aaKnown RBP11.82□□□□□ -0.52
R3HDM1-212ENST00000456040 FAM205CA6NFA0 338 aa11.77□□□□□ -0.53
R3HDM1-212ENST00000456040 CIZ1Q9ULV3 898 aaPredicted RBP11.77□□□□□ -0.53
R3HDM1-212ENST00000456040 SPOCK2Q92563 424 aa11.75□□□□□ -0.53
R3HDM1-212ENST00000456040 HS3ST6Q96QI5 342 aa11.75□□□□□ -0.53
R3HDM1-212ENST00000456040 ZNF710Q8N1W2 664 aa11.73□□□□□ -0.53
R3HDM1-212ENST00000456040 CABP2Q9NPB3 220 aa11.73□□□□□ -0.53
R3HDM1-212ENST00000456040 BOLA1Q9Y3E2 137 aa11.73□□□□□ -0.53
R3HDM1-212ENST00000456040 ILDR1Q86SU0 546 aaPredicted RBP11.68□□□□□ -0.54
R3HDM1-212ENST00000456040 DOK7Q18PE1 504 aa11.67□□□□□ -0.54
R3HDM1-212ENST00000456040 DPY19L2Q6NUT2 758 aa11.67□□□□□ -0.54
R3HDM1-212ENST00000456040 RIMBP2O15034 1052 aa11.66□□□□□ -0.54
R3HDM1-212ENST00000456040 KRTAP3-3Q9BYR6 98 aa11.63□□□□□ -0.55
R3HDM1-212ENST00000456040 KRTAP3-2Q9BYR7 98 aa11.63□□□□□ -0.55
R3HDM1-212ENST00000456040 ERBB3P21860 1342 aa11.62□□□□□ -0.55
R3HDM1-212ENST00000456040 TRIM41Q8WV44 630 aa11.62□□□□□ -0.55
R3HDM1-212ENST00000456040 POTEB3A0JP26 581 aa11.6□□□□□ -0.55
R3HDM1-212ENST00000456040 HOXB1P14653 301 aaPredicted RBP11.6□□□□□ -0.55
R3HDM1-212ENST00000456040 POTEBQ6S5H4 581 aa11.6□□□□□ -0.55
R3HDM1-212ENST00000456040 HOXB3P14651 431 aaPredicted RBP11.58□□□□□ -0.56
R3HDM1-212ENST00000456040 IFNLR1Q8IU57 520 aaPredicted RBP11.58□□□□□ -0.56
R3HDM1-212ENST00000456040 EFCAB3Q8N7B9 438 aa11.53□□□□□ -0.56
R3HDM1-212ENST00000456040 ZSWIM6Q9HCJ5 1215 aa11.5□□□□□ -0.57
R3HDM1-212ENST00000456040 VARS2Q5ST30 1063 aaKnown RBP11.48□□□□□ -0.57
R3HDM1-212ENST00000456040 RNF166Q96A37 237 aaPredicted RBP11.48□□□□□ -0.57
R3HDM1-212ENST00000456040 SOX12O15370 315 aa11.47□□□□□ -0.57
R3HDM1-212ENST00000456040 MICALL2Q8IY33 904 aa11.44□□□□□ -0.58
R3HDM1-212ENST00000456040 MYT1LQ9UL68 1186 aa11.43□□□□□ -0.58
R3HDM1-212ENST00000456040 ZNF687Q8N1G0 1237 aa11.42□□□□□ -0.58
R3HDM1-212ENST00000456040 RIOK3O14730 519 aaKnown RBP11.41□□□□□ -0.58
R3HDM1-212ENST00000456040 PTGER2P43116 358 aa11.41□□□□□ -0.58
R3HDM1-212ENST00000456040 VGFO15240 615 aaPredicted RBP11.38□□□□□ -0.59
R3HDM1-212ENST00000456040 TAOK2Q9UL54 1235 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms