RNA–Protein interactions for RNA: ENST00000455013.2

C1DP3-201, Transcript of C1D nuclear receptor corepressor pseudogene 3, humanhuman

BASIC

Gene C1DP3, Length 423 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1DP3-201ENST00000455013 DNAJC5Q9H3Z4 198 aa12.74□□□□□ -0.37
C1DP3-201ENST00000455013 PRR29P0C7W0 189 aa12.73□□□□□ -0.37
C1DP3-201ENST00000455013 CHGAP10645 457 aaKnown RBP12.73□□□□□ -0.37
C1DP3-201ENST00000455013 GSE1Q14687 1217 aa12.7□□□□□ -0.38
C1DP3-201ENST00000455013 TSHZ2Q9NRE2 1034 aa12.69□□□□□ -0.38
C1DP3-201ENST00000455013 PRKCSHP14314 528 aaPredicted RBP12.68□□□□□ -0.38
C1DP3-201ENST00000455013 FXR2P51116 673 aaKnown RBP eCLIP12.68□□□□□ -0.38
C1DP3-201ENST00000455013 PIP4P2Q8N4L2 257 aa12.61□□□□□ -0.39
C1DP3-201ENST00000455013 RNF25Q96BH1 459 aaPredicted RBP12.61□□□□□ -0.39
C1DP3-201ENST00000455013 NUBP1P53384 320 aa12.6□□□□□ -0.39
C1DP3-201ENST00000455013 TPRNQ4KMQ1 711 aa12.6□□□□□ -0.39
C1DP3-201ENST00000455013 CREBZFQ9NS37 354 aa12.6□□□□□ -0.39
C1DP3-201ENST00000455013 RIOK3O14730 519 aaKnown RBP12.55□□□□□ -0.4
C1DP3-201ENST00000455013 PRKAR2AP13861 404 aaKnown RBP12.54□□□□□ -0.4
C1DP3-201ENST00000455013 MNX1P50219 401 aaPredicted RBP12.5□□□□□ -0.41
C1DP3-201ENST00000455013 CHADLQ6NUI6 762 aa12.5□□□□□ -0.41
C1DP3-201ENST00000455013 FAM212AQ96EL1 285 aa12.5□□□□□ -0.41
C1DP3-201ENST00000455013 CHRM1P11229 460 aaPredicted RBP12.49□□□□□ -0.41
C1DP3-201ENST00000455013 NBR1Q14596 966 aa12.49□□□□□ -0.41
C1DP3-201ENST00000455013 VGFO15240 615 aaPredicted RBP12.47□□□□□ -0.41
C1DP3-201ENST00000455013 NKX1-1Q15270 411 aaPredicted RBP12.47□□□□□ -0.41
C1DP3-201ENST00000455013 DCAF8Q5TAQ9 597 aa12.46□□□□□ -0.41
C1DP3-201ENST00000455013 SGIP1Q9BQI5 828 aa12.46□□□□□ -0.41
C1DP3-201ENST00000455013 GTPBP6O43824 516 aaPredicted RBP12.44□□□□□ -0.42
C1DP3-201ENST00000455013 FARP1Q9Y4F1 1045 aaPredicted RBP12.44□□□□□ -0.42
C1DP3-201ENST00000455013 RYDENQ9NUL5 291 aaKnown RBP12.42□□□□□ -0.42
C1DP3-201ENST00000455013 STK25O00506 426 aa12.39□□□□□ -0.43
C1DP3-201ENST00000455013 POTEHQ6S545 545 aa12.38□□□□□ -0.43
C1DP3-201ENST00000455013 RASEFQ8IZ41 740 aa12.33□□□□□ -0.44
C1DP3-201ENST00000455013 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.29□□□□□ -0.44
C1DP3-201ENST00000455013 ZFP91Q96JP5 570 aaPredicted RBP12.29□□□□□ -0.44
C1DP3-201ENST00000455013 BCL11BQ9C0K0 894 aaPredicted RBP12.29□□□□□ -0.44
C1DP3-201ENST00000455013 STK24Q9Y6E0 443 aa12.27□□□□□ -0.45
C1DP3-201ENST00000455013 C19orf67A6NJJ6 358 aa12.25□□□□□ -0.45
C1DP3-201ENST00000455013 P3H3Q8IVL6 736 aa12.22□□□□□ -0.45
C1DP3-201ENST00000455013 PYGBP11216 843 aa12.2□□□□□ -0.46
C1DP3-201ENST00000455013 CD44P16070 742 aaKnown RBP12.18□□□□□ -0.46
C1DP3-201ENST00000455013 ZNF467Q7Z7K2 595 aaPredicted RBP12.18□□□□□ -0.46
C1DP3-201ENST00000455013 HAX1O00165 279 aa12.15□□□□□ -0.46
C1DP3-201ENST00000455013 PAK3O75914 559 aaPredicted RBP12.15□□□□□ -0.46
C1DP3-201ENST00000455013 TSPYL2Q9H2G4 693 aaPredicted RBP12.12□□□□□ -0.47
C1DP3-201ENST00000455013 PDAP1Q13442 181 aaKnown RBP12.11□□□□□ -0.47
C1DP3-201ENST00000455013 CCDC61Q9Y6R9 512 aa12.11□□□□□ -0.47
C1DP3-201ENST00000455013 ZNF579Q8NAF0 562 aaKnown RBP12.09□□□□□ -0.47
C1DP3-201ENST00000455013 ZRANB1Q9UGI0 708 aa12.09□□□□□ -0.47
C1DP3-201ENST00000455013 EVX2Q03828 476 aa12.08□□□□□ -0.48
C1DP3-201ENST00000455013 KCNV2Q8TDN2 545 aa12.02□□□□□ -0.49
C1DP3-201ENST00000455013 WDR70Q9NW82 654 aa12.02□□□□□ -0.49
C1DP3-201ENST00000455013 CLCN6P51797 869 aa12□□□□□ -0.49
C1DP3-201ENST00000455013 CADPS2Q86UW7 1296 aa12□□□□□ -0.49
C1DP3-201ENST00000455013 KIF12Q96FN5 646 aa11.98□□□□□ -0.49
C1DP3-201ENST00000455013 PHF12Q96QT6 1004 aa11.98□□□□□ -0.49
C1DP3-201ENST00000455013 MFRPQ9BY79 579 aa11.97□□□□□ -0.49
C1DP3-201ENST00000455013 PSEN1P49768 467 aa11.96□□□□□ -0.49
C1DP3-201ENST00000455013 ERICH6Q7L0X2 663 aa11.96□□□□□ -0.49
C1DP3-201ENST00000455013 TMEM132AQ24JP5 1023 aa11.95□□□□□ -0.5
C1DP3-201ENST00000455013 PCDHB8Q9UN66 801 aa11.94□□□□□ -0.5
C1DP3-201ENST00000455013 PCDHB13Q9Y5F0 798 aa11.94□□□□□ -0.5
C1DP3-201ENST00000455013 LMOD2Q6P5Q4 547 aa11.93□□□□□ -0.5
C1DP3-201ENST00000455013 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.93□□□□□ -0.5
C1DP3-201ENST00000455013 MAP3K13O43283 966 aa11.92□□□□□ -0.5
C1DP3-201ENST00000455013 SP7Q8TDD2 431 aaPredicted RBP11.92□□□□□ -0.5
C1DP3-201ENST00000455013 ARHGEF1Q92888 912 aaKnown RBP11.91□□□□□ -0.5
C1DP3-201ENST00000455013 TULP1O00294 542 aaPredicted RBP11.9□□□□□ -0.5
C1DP3-201ENST00000455013 GTF3C3Q9Y5Q9 886 aa11.9□□□□□ -0.5
C1DP3-201ENST00000455013 SOX12O15370 315 aa11.88□□□□□ -0.51
C1DP3-201ENST00000455013 NLRP6P59044 892 aa11.88□□□□□ -0.51
C1DP3-201ENST00000455013 FBXO22Q8NEZ5 403 aa11.88□□□□□ -0.51
C1DP3-201ENST00000455013 TIMELESSQ9UNS1 1208 aa11.87□□□□□ -0.51
C1DP3-201ENST00000455013 GABBR2O75899 941 aa11.86□□□□□ -0.51
C1DP3-201ENST00000455013 MS4A3Q96HJ5 214 aa11.86□□□□□ -0.51
C1DP3-201ENST00000455013 IFNL1Q8IU54 200 aa11.85□□□□□ -0.51
C1DP3-201ENST00000455013 GALR2O43603 387 aaPredicted RBP11.83□□□□□ -0.52
C1DP3-201ENST00000455013 E2F4Q16254 413 aa11.83□□□□□ -0.52
C1DP3-201ENST00000455013 PPP1R37O75864 691 aa11.8□□□□□ -0.52
C1DP3-201ENST00000455013 EFCAB3Q8N7B9 438 aa11.8□□□□□ -0.52
C1DP3-201ENST00000455013 TESPA1A2RU30 521 aaPredicted RBP11.78□□□□□ -0.52
C1DP3-201ENST00000455013 CABP2Q9NPB3 220 aa11.78□□□□□ -0.52
C1DP3-201ENST00000455013 PHF8Q9UPP1 1060 aa11.76□□□□□ -0.53
C1DP3-201ENST00000455013 TIE1P35590 1138 aa11.75□□□□□ -0.53
C1DP3-201ENST00000455013 ARIH1Q9Y4X5 557 aaPredicted RBP11.75□□□□□ -0.53
C1DP3-201ENST00000455013 MFSD10Q14728 455 aa11.74□□□□□ -0.53
C1DP3-201ENST00000455013 TRPC6Q9Y210 931 aa11.74□□□□□ -0.53
C1DP3-201ENST00000455013 ZC3H15Q8WU90 426 aaKnown RBP11.73□□□□□ -0.53
C1DP3-201ENST00000455013 NCKAP5LQ9HCH0 1330 aa11.71□□□□□ -0.53
C1DP3-201ENST00000455013 BRPF1P55201 1214 aaPredicted RBP11.71□□□□□ -0.53
C1DP3-201ENST00000455013 PDE4AP27815 886 aa11.69□□□□□ -0.54
C1DP3-201ENST00000455013 ASTLQ6HA08 431 aaPredicted RBP11.69□□□□□ -0.54
C1DP3-201ENST00000455013 CRISPLD2Q9H0B8 497 aa11.69□□□□□ -0.54
C1DP3-201ENST00000455013 BMP2KQ9NSY1 1161 aaPredicted RBP11.69□□□□□ -0.54
C1DP3-201ENST00000455013 SEMA3EO15041 775 aa11.68□□□□□ -0.54
C1DP3-201ENST00000455013 SMYD5Q6GMV2 418 aa11.68□□□□□ -0.54
C1DP3-201ENST00000455013 TTLL13PA6NNM8 815 aa11.67□□□□□ -0.54
C1DP3-201ENST00000455013 MS4A4AQ96JQ5 239 aa11.66□□□□□ -0.54
C1DP3-201ENST00000455013 TMEM106CQ9BVX2 250 aa11.66□□□□□ -0.54
C1DP3-201ENST00000455013 ATMINO43313 823 aaPredicted RBP11.65□□□□□ -0.54
C1DP3-201ENST00000455013 CAMK2BQ13554 666 aa11.65□□□□□ -0.54
C1DP3-201ENST00000455013 DCBLD2Q96PD2 775 aa11.65□□□□□ -0.54
C1DP3-201ENST00000455013 LARP6Q9BRS8 491 aaKnown RBP11.64□□□□□ -0.55
C1DP3-201ENST00000455013 POTEIP0CG38 1075 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms