RNA–Protein interactions for RNA: ENST00000454757.6

EGFR-206, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 5,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-206ENST00000454757 ARXQ96QS3 562 aa19.6■□□□□ 0.73
EGFR-206ENST00000454757 LMOD2Q6P5Q4 547 aa19.57■□□□□ 0.72
EGFR-206ENST00000454757 HNRNPUQ00839 825 aaKnown RBP eCLIP19.57■□□□□ 0.72
EGFR-206ENST00000454757 RSF1Q96T23 1441 aaPredicted RBP19.56■□□□□ 0.72
EGFR-206ENST00000454757 RB1CC1Q8TDY2 1594 aa19.54■□□□□ 0.72
EGFR-206ENST00000454757 NPHP1O15259 732 aa19.53■□□□□ 0.72
EGFR-206ENST00000454757 CFAP53Q96M91 514 aa19.52■□□□□ 0.72
EGFR-206ENST00000454757 CDCA8Q53HL2 280 aa19.51■□□□□ 0.71
EGFR-206ENST00000454757 CFDP1Q9UEE9 299 aaPredicted RBP19.51■□□□□ 0.71
EGFR-206ENST00000454757 ZCCHC6Q5VYS8 1495 aaKnown RBP19.5■□□□□ 0.71
EGFR-206ENST00000454757 DDX10Q13206 875 aaKnown RBP19.5■□□□□ 0.71
EGFR-206ENST00000454757 RRP7BPQ9NSQ0 103 aa19.48■□□□□ 0.71
EGFR-206ENST00000454757 HDGFP51858 240 aaKnown RBP19.47■□□□□ 0.71
EGFR-206ENST00000454757 RGL3Q3MIN7 710 aa19.47■□□□□ 0.71
EGFR-206ENST00000454757 POGKQ9P215 609 aa19.46■□□□□ 0.71
EGFR-206ENST00000454757 MRS2Q9HD23 443 aa19.44■□□□□ 0.7
EGFR-206ENST00000454757 PPM1GO15355 546 aaPredicted RBP19.42■□□□□ 0.7
EGFR-206ENST00000454757 EIF4G2P78344 907 aaKnown RBP eCLIP19.41■□□□□ 0.7
EGFR-206ENST00000454757 FKBP8Q14318 412 aa19.39■□□□□ 0.69
EGFR-206ENST00000454757 CCDC136Q96JN2 1154 aa19.38■□□□□ 0.69
EGFR-206ENST00000454757 MIER1Q8N108 512 aa19.38■□□□□ 0.69
EGFR-206ENST00000454757 CLIP1P30622 1438 aa19.37■□□□□ 0.69
EGFR-206ENST00000454757 CCDC180Q9P1Z9 1646 aa19.36■□□□□ 0.69
EGFR-206ENST00000454757 KNSTRNQ9Y448 316 aa19.35■□□□□ 0.69
EGFR-206ENST00000454757 BAZ1BQ9UIG0 1483 aaKnown RBP19.34■□□□□ 0.69
EGFR-206ENST00000454757 MLECQ14165 292 aa19.34■□□□□ 0.69
EGFR-206ENST00000454757 NUDCQ9Y266 331 aa19.33■□□□□ 0.69
EGFR-206ENST00000454757 MAPK8IP3Q9UPT6 1336 aa19.31■□□□□ 0.68
EGFR-206ENST00000454757 KIF27Q86VH2 1401 aa19.29■□□□□ 0.68
EGFR-206ENST00000454757 KANK1Q14678 1352 aa19.28■□□□□ 0.68
EGFR-206ENST00000454757 EEA1Q15075 1411 aa19.25■□□□□ 0.67
EGFR-206ENST00000454757 NCLP19338 710 aaKnown RBP19.24■□□□□ 0.67
EGFR-206ENST00000454757 GOLGA2Q08379 1002 aa19.23■□□□□ 0.67
EGFR-206ENST00000454757 CARD11Q9BXL7 1154 aa19.23■□□□□ 0.67
EGFR-206ENST00000454757 EIF5BO60841 1220 aaKnown RBP19.22■□□□□ 0.67
EGFR-206ENST00000454757 CASC1Q6TDU7 716 aa19.2■□□□□ 0.66
EGFR-206ENST00000454757 ZRSR1Q15695 479 aaKnown RBP19.2■□□□□ 0.66
EGFR-206ENST00000454757 LAS1LQ9Y4W2 734 aaKnown RBP19.19■□□□□ 0.66
EGFR-206ENST00000454757 PNNQ9H307 717 aaKnown RBP19.18■□□□□ 0.66
EGFR-206ENST00000454757 WRNQ14191 1432 aaPredicted RBP eCLIP19.18■□□□□ 0.66
EGFR-206ENST00000454757 FTSJ3Q8IY81 847 aaKnown RBP19.17■□□□□ 0.66
EGFR-206ENST00000454757 CCNB3Q8WWL7 1395 aa19.17■□□□□ 0.66
EGFR-206ENST00000454757 GOLGA3Q08378 1498 aa19.16■□□□□ 0.66
EGFR-206ENST00000454757 TULP1O00294 542 aaPredicted RBP19.15■□□□□ 0.66
EGFR-206ENST00000454757 CHMP4BQ9H444 224 aaKnown RBP19.15■□□□□ 0.66
EGFR-206ENST00000454757 NACADO15069 1562 aa19.15■□□□□ 0.66
EGFR-206ENST00000454757 OS9Q13438 667 aaPredicted RBP19.13■□□□□ 0.65
EGFR-206ENST00000454757 NEUROD2Q15784 382 aa19.11■□□□□ 0.65
EGFR-206ENST00000454757 HIRIP3Q9BW71 556 aaPredicted RBP19.11■□□□□ 0.65
EGFR-206ENST00000454757 GGT6Q6P531 493 aa19.11■□□□□ 0.65
EGFR-206ENST00000454757 BECN1Q14457 450 aa19.1■□□□□ 0.65
EGFR-206ENST00000454757 GOLGA6L22H0YM25 854 aa19.1■□□□□ 0.65
EGFR-206ENST00000454757 U2SURPO15042 1029 aaKnown RBP19.09■□□□□ 0.65
EGFR-206ENST00000454757 SRPK2P78362 688 aaKnown RBP19.09■□□□□ 0.65
EGFR-206ENST00000454757 SOX12O15370 315 aa19.07■□□□□ 0.64
EGFR-206ENST00000454757 TMX4Q9H1E5 349 aaPredicted RBP19.07■□□□□ 0.64
EGFR-206ENST00000454757 TNNT2P45379 298 aaPredicted RBP19.06■□□□□ 0.64
EGFR-206ENST00000454757 FGD1P98174 961 aa19.05■□□□□ 0.64
EGFR-206ENST00000454757 CSB-PGBD3P0DP91 1061 aa19.05■□□□□ 0.64
EGFR-206ENST00000454757 CCDC9Q9Y3X0 531 aaKnown RBP19.05■□□□□ 0.64
EGFR-206ENST00000454757 CARMIL2Q6F5E8 1435 aa19.05■□□□□ 0.64
EGFR-206ENST00000454757 MS4A1P11836 297 aa19.04■□□□□ 0.64
EGFR-206ENST00000454757 EIF4G1Q04637 1599 aaKnown RBP19.02■□□□□ 0.63
EGFR-206ENST00000454757 TMF1P82094 1093 aa19.01■□□□□ 0.63
EGFR-206ENST00000454757 KCNJ4P48050 445 aa19■□□□□ 0.63
EGFR-206ENST00000454757 RTF1Q92541 710 aaKnown RBP19■□□□□ 0.63
EGFR-206ENST00000454757 ANP32EQ9BTT0 268 aa19■□□□□ 0.63
EGFR-206ENST00000454757 PAK3O75914 559 aaPredicted RBP18.99■□□□□ 0.63
EGFR-206ENST00000454757 FHAD1B1AJZ9 1412 aa18.99■□□□□ 0.63
EGFR-206ENST00000454757 CEP164Q9UPV0 1460 aa18.98■□□□□ 0.63
EGFR-206ENST00000454757 NBR1Q14596 966 aa18.98■□□□□ 0.63
EGFR-206ENST00000454757 EFCAB2Q5VUJ9 269 aa18.98■□□□□ 0.63
EGFR-206ENST00000454757 HDGFL2Q7Z4V5 671 aaPredicted RBP18.98■□□□□ 0.63
EGFR-206ENST00000454757 IRX6P78412 446 aaPredicted RBP18.98■□□□□ 0.63
EGFR-206ENST00000454757 PDS5BQ9NTI5 1447 aa18.98■□□□□ 0.63
EGFR-206ENST00000454757 EID1Q9Y6B2 187 aa18.97■□□□□ 0.63
EGFR-206ENST00000454757 ISY1Q9ULR0 285 aaKnown RBP18.97■□□□□ 0.63
EGFR-206ENST00000454757 SAFB2Q14151 953 aaKnown RBP eCLIP18.97■□□□□ 0.63
EGFR-206ENST00000454757 CEP162Q5TB80 1403 aa18.96■□□□□ 0.63
EGFR-206ENST00000454757 DDRGK1Q96HY6 314 aa18.96■□□□□ 0.63
EGFR-206ENST00000454757 DCAF11Q8TEB1 546 aa18.95■□□□□ 0.62
EGFR-206ENST00000454757 AEBP2Q6ZN18 517 aaPredicted RBP18.94■□□□□ 0.62
EGFR-206ENST00000454757 CARMIL1Q5VZK9 1371 aa18.94■□□□□ 0.62
EGFR-206ENST00000454757 STK26Q9P289 416 aa18.94■□□□□ 0.62
EGFR-206ENST00000454757 TAOK2Q9UL54 1235 aa18.94■□□□□ 0.62
EGFR-206ENST00000454757 FRAT1Q92837 279 aaPredicted RBP18.92■□□□□ 0.62
EGFR-206ENST00000454757 NAP1L2Q9ULW6 460 aaPredicted RBP18.92■□□□□ 0.62
EGFR-206ENST00000454757 MORC1Q86VD1 984 aa18.92■□□□□ 0.62
EGFR-206ENST00000454757 CHMP4AQ9BY43 222 aa18.92■□□□□ 0.62
EGFR-206ENST00000454757 CUX2O14529 1486 aa18.91■□□□□ 0.62
EGFR-206ENST00000454757 CC2D1BQ5T0F9 858 aaKnown RBP18.9■□□□□ 0.62
EGFR-206ENST00000454757 ZNF330Q9Y3S2 320 aaPredicted RBP18.89■□□□□ 0.61
EGFR-206ENST00000454757 SUPT16HQ9Y5B9 1047 aaKnown RBP18.88■□□□□ 0.61
EGFR-206ENST00000454757 CLSTN1O94985 981 aa18.86■□□□□ 0.61
EGFR-206ENST00000454757 TNIKQ9UKE5 1360 aa18.85■□□□□ 0.61
EGFR-206ENST00000454757 BAZ1AQ9NRL2 1556 aaPredicted RBP18.84■□□□□ 0.61
EGFR-206ENST00000454757 TRIM44Q96DX7 344 aaPredicted RBP18.84■□□□□ 0.61
EGFR-206ENST00000454757 PTMAP06454 111 aaKnown RBP18.83■□□□□ 0.6
EGFR-206ENST00000454757 G3V3G9 751 aa18.81■□□□□ 0.6
EGFR-206ENST00000454757 DCAF8Q5TAQ9 597 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms