RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 PLEKHG5O94827 1062 aa10.23□□□□□ -0.77
VPS8-211ENST00000452140 DCAF8L2P0C7V8 631 aa10.2□□□□□ -0.78
VPS8-211ENST00000452140 POTEIP0CG38 1075 aa10.19□□□□□ -0.78
VPS8-211ENST00000452140 MNX1P50219 401 aaPredicted RBP10.19□□□□□ -0.78
VPS8-211ENST00000452140 SLC24A1O60721 1099 aa10.17□□□□□ -0.78
VPS8-211ENST00000452140 ZBTB47Q9UFB7 747 aaPredicted RBP10.17□□□□□ -0.78
VPS8-211ENST00000452140 ECM2O94769 699 aaPredicted RBP10.15□□□□□ -0.78
VPS8-211ENST00000452140 CIZ1Q9ULV3 898 aaPredicted RBP10.14□□□□□ -0.79
VPS8-211ENST00000452140 GALR2O43603 387 aaPredicted RBP10.12□□□□□ -0.79
VPS8-211ENST00000452140 PHF12Q96QT6 1004 aa10.11□□□□□ -0.79
VPS8-211ENST00000452140 RGL2O15211 777 aa10.06□□□□□ -0.8
VPS8-211ENST00000452140 NUBP1P53384 320 aa10.06□□□□□ -0.8
VPS8-211ENST00000452140 TSPYL2Q9H2G4 693 aaPredicted RBP10.03□□□□□ -0.8
VPS8-211ENST00000452140 DCAF8Q5TAQ9 597 aa10□□□□□ -0.81
VPS8-211ENST00000452140 RASEFQ8IZ41 740 aa9.99□□□□□ -0.81
VPS8-211ENST00000452140 GSE1Q14687 1217 aa9.98□□□□□ -0.81
VPS8-211ENST00000452140 MS4A3Q96HJ5 214 aa9.98□□□□□ -0.81
VPS8-211ENST00000452140 CCDC61Q9Y6R9 512 aa9.97□□□□□ -0.81
VPS8-211ENST00000452140 FAM212AQ96EL1 285 aa9.96□□□□□ -0.82
VPS8-211ENST00000452140 ASTLQ6HA08 431 aaPredicted RBP9.95□□□□□ -0.82
VPS8-211ENST00000452140 PLCB2Q00722 1185 aa9.94□□□□□ -0.82
VPS8-211ENST00000452140 TRIM41Q8WV44 630 aa9.93□□□□□ -0.82
VPS8-211ENST00000452140 RNF25Q96BH1 459 aaPredicted RBP9.93□□□□□ -0.82
VPS8-211ENST00000452140 KIF12Q96FN5 646 aa9.92□□□□□ -0.82
VPS8-211ENST00000452140 ATMINO43313 823 aaPredicted RBP9.91□□□□□ -0.82
VPS8-211ENST00000452140 C7P10643 843 aa9.91□□□□□ -0.82
VPS8-211ENST00000452140 PELP1Q8IZL8 1130 aaKnown RBP9.91□□□□□ -0.82
VPS8-211ENST00000452140 SLC39A7Q92504 469 aa9.91□□□□□ -0.82
VPS8-211ENST00000452140 CHGAP10645 457 aaKnown RBP9.9□□□□□ -0.82
VPS8-211ENST00000452140 METRNQ9UJH8 293 aa9.88□□□□□ -0.83
VPS8-211ENST00000452140 PYGBP11216 843 aa9.87□□□□□ -0.83
VPS8-211ENST00000452140 POTEB2H3BUK9 544 aa9.86□□□□□ -0.83
VPS8-211ENST00000452140 MAP3K13O43283 966 aa9.86□□□□□ -0.83
VPS8-211ENST00000452140 BBXQ8WY36 941 aaPredicted RBP9.86□□□□□ -0.83
VPS8-211ENST00000452140 OTUD5Q96G74 571 aa9.86□□□□□ -0.83
VPS8-211ENST00000452140 HAP1P54257 671 aaPredicted RBP9.85□□□□□ -0.83
VPS8-211ENST00000452140 RIOK3O14730 519 aaKnown RBP9.83□□□□□ -0.84
VPS8-211ENST00000452140 ATN1P54259 1190 aaPredicted RBP9.83□□□□□ -0.84
VPS8-211ENST00000452140 SGIP1Q9BQI5 828 aa9.83□□□□□ -0.84
VPS8-211ENST00000452140 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.83□□□□□ -0.84
VPS8-211ENST00000452140 TIE1P35590 1138 aa9.82□□□□□ -0.84
VPS8-211ENST00000452140 MAMSTRQ6ZN01 415 aa9.81□□□□□ -0.84
VPS8-211ENST00000452140 PAXIP1Q6ZW49 1069 aaPredicted RBP9.81□□□□□ -0.84
VPS8-211ENST00000452140 CFAP44Q96MT7 982 aa9.81□□□□□ -0.84
VPS8-211ENST00000452140 CHRM1P11229 460 aaPredicted RBP9.8□□□□□ -0.84
VPS8-211ENST00000452140 BMP2KQ9NSY1 1161 aaPredicted RBP9.8□□□□□ -0.84
VPS8-211ENST00000452140 HS6ST3Q8IZP7 471 aa9.79□□□□□ -0.84
VPS8-211ENST00000452140 PCDHB13Q9Y5F0 798 aa9.79□□□□□ -0.84
VPS8-211ENST00000452140 TRPC6Q9Y210 931 aa9.76□□□□□ -0.85
VPS8-211ENST00000452140 STK25O00506 426 aa9.75□□□□□ -0.85
VPS8-211ENST00000452140 VGFO15240 615 aaPredicted RBP9.75□□□□□ -0.85
VPS8-211ENST00000452140 TTLL13PA6NNM8 815 aa9.74□□□□□ -0.85
VPS8-211ENST00000452140 SCUBE2Q9NQ36 999 aa9.74□□□□□ -0.85
VPS8-211ENST00000452140 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.73□□□□□ -0.85
VPS8-211ENST00000452140 SPRYD3Q8NCJ5 442 aa9.73□□□□□ -0.85
VPS8-211ENST00000452140 ZFP91Q96JP5 570 aaPredicted RBP9.73□□□□□ -0.85
VPS8-211ENST00000452140 TAOK2Q9UL54 1235 aa9.73□□□□□ -0.85
VPS8-211ENST00000452140 SEC24BO95487 1268 aa9.72□□□□□ -0.85
VPS8-211ENST00000452140 POTEJP0CG39 1038 aa9.7□□□□□ -0.86
VPS8-211ENST00000452140 NKX1-1Q15270 411 aaPredicted RBP9.7□□□□□ -0.86
VPS8-211ENST00000452140 IER5LQ5T953 404 aa9.7□□□□□ -0.86
VPS8-211ENST00000452140 IFNL1Q8IU54 200 aa9.7□□□□□ -0.86
VPS8-211ENST00000452140 BCL11BQ9C0K0 894 aaPredicted RBP9.7□□□□□ -0.86
VPS8-211ENST00000452140 PCDHB8Q9UN66 801 aa9.7□□□□□ -0.86
VPS8-211ENST00000452140 STK24Q9Y6E0 443 aa9.7□□□□□ -0.86
VPS8-211ENST00000452140 TRIM35Q9UPQ4 493 aa9.69□□□□□ -0.86
VPS8-211ENST00000452140 POTEFA5A3E0 1075 aa9.66□□□□□ -0.86
VPS8-211ENST00000452140 ZNF467Q7Z7K2 595 aaPredicted RBP9.66□□□□□ -0.86
VPS8-211ENST00000452140 TMEM106CQ9BVX2 250 aa9.66□□□□□ -0.86
VPS8-211ENST00000452140 DNAJC5Q9H3Z4 198 aa9.65□□□□□ -0.86
VPS8-211ENST00000452140 TSHZ2Q9NRE2 1034 aa9.65□□□□□ -0.86
VPS8-211ENST00000452140 COLQQ9Y215 455 aaPredicted RBP9.64□□□□□ -0.87
VPS8-211ENST00000452140 POTEMA6NI47 508 aa9.63□□□□□ -0.87
VPS8-211ENST00000452140 PDAP1Q13442 181 aaKnown RBP9.61□□□□□ -0.87
VPS8-211ENST00000452140 VSIG10Q8N0Z9 540 aa9.61□□□□□ -0.87
VPS8-211ENST00000452140 KDM2AQ9Y2K7 1162 aa9.61□□□□□ -0.87
VPS8-211ENST00000452140 GTPBP6O43824 516 aaPredicted RBP9.6□□□□□ -0.87
VPS8-211ENST00000452140 POTEGQ6S5H5 508 aa9.6□□□□□ -0.87
VPS8-211ENST00000452140 PSEN1P49768 467 aa9.59□□□□□ -0.87
VPS8-211ENST00000452140 PLSCR2Q9NRY7 297 aa9.59□□□□□ -0.87
VPS8-211ENST00000452140 PLCG2P16885 1265 aa9.58□□□□□ -0.88
VPS8-211ENST00000452140 FAM163AQ96GL9 167 aaPredicted RBP9.56□□□□□ -0.88
VPS8-211ENST00000452140 PCDH10Q9P2E7 1040 aa9.56□□□□□ -0.88
VPS8-211ENST00000452140 IRX5P78411 483 aaPredicted RBP9.53□□□□□ -0.88
VPS8-211ENST00000452140 OCEL1Q9H607 264 aa9.53□□□□□ -0.88
VPS8-211ENST00000452140 CABP2Q9NPB3 220 aa9.5□□□□□ -0.89
VPS8-211ENST00000452140 GOLGA2Q08379 1002 aa9.49□□□□□ -0.89
VPS8-211ENST00000452140 SLAIN1Q8ND83 568 aa9.49□□□□□ -0.89
VPS8-211ENST00000452140 EFCAB3Q8N7B9 438 aa9.48□□□□□ -0.89
VPS8-211ENST00000452140 LCE2DQ5TA82 110 aaPredicted RBP9.47□□□□□ -0.89
VPS8-211ENST00000452140 MFRPQ9BY79 579 aa9.47□□□□□ -0.89
VPS8-211ENST00000452140 RYDENQ9NUL5 291 aaKnown RBP9.47□□□□□ -0.89
VPS8-211ENST00000452140 MKRN3Q13064 507 aaKnown RBP9.45□□□□□ -0.9
VPS8-211ENST00000452140 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.43□□□□□ -0.9
VPS8-211ENST00000452140 PHF8Q9UPP1 1060 aa9.43□□□□□ -0.9
VPS8-211ENST00000452140 BCANQ96GW7 911 aa9.41□□□□□ -0.9
VPS8-211ENST00000452140 SNPHO15079 494 aa9.39□□□□□ -0.91
VPS8-211ENST00000452140 PPP1R37O75864 691 aa9.39□□□□□ -0.91
VPS8-211ENST00000452140 CADPS2Q86UW7 1296 aa9.39□□□□□ -0.91
VPS8-211ENST00000452140 FBXO22Q8NEZ5 403 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms