RNA–Protein interactions for RNA: ENST00000450865.2

VNN3-210, Transcript of vanin 3, humanhuman

TSL 4 BASIC

Gene VNN3, Length 596 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-210ENST00000450865 NCAPD3P42695 1498 aa12.25□□□□□ -0.45
VNN3-210ENST00000450865 TOP2AP11388 1531 aaKnown RBP12.23□□□□□ -0.45
VNN3-210ENST00000450865 EVX2Q03828 476 aa12.21□□□□□ -0.45
VNN3-210ENST00000450865 SUPT5HO00267 1087 aaKnown RBP12.19□□□□□ -0.46
VNN3-210ENST00000450865 LHX8Q68G74 356 aa12.18□□□□□ -0.46
VNN3-210ENST00000450865 CHADLQ6NUI6 762 aa12.18□□□□□ -0.46
VNN3-210ENST00000450865 STAG3Q9UJ98 1225 aa12.16□□□□□ -0.46
VNN3-210ENST00000450865 C19orf67A6NJJ6 358 aa12.08□□□□□ -0.48
VNN3-210ENST00000450865 FARP1Q9Y4F1 1045 aaPredicted RBP12.04□□□□□ -0.48
VNN3-210ENST00000450865 PRDM2Q13029 1718 aa12.03□□□□□ -0.48
VNN3-210ENST00000450865 CCDC88BA6NC98 1476 aa12.02□□□□□ -0.49
VNN3-210ENST00000450865 LAMC3Q9Y6N6 1575 aa11.99□□□□□ -0.49
VNN3-210ENST00000450865 CREBZFQ9NS37 354 aa11.96□□□□□ -0.49
VNN3-210ENST00000450865 NESP48681 1621 aa11.95□□□□□ -0.5
VNN3-210ENST00000450865 CD44P16070 742 aaKnown RBP11.94□□□□□ -0.5
VNN3-210ENST00000450865 PROM2Q8N271 834 aa11.93□□□□□ -0.5
VNN3-210ENST00000450865 KIF21AQ7Z4S6 1674 aa11.93□□□□□ -0.5
VNN3-210ENST00000450865 CADPSQ9ULU8 1353 aa11.91□□□□□ -0.5
VNN3-210ENST00000450865 CFTRP13569 1480 aa11.89□□□□□ -0.51
VNN3-210ENST00000450865 ERCC6Q03468 1493 aa11.88□□□□□ -0.51
VNN3-210ENST00000450865 GABBR2O75899 941 aa11.87□□□□□ -0.51
VNN3-210ENST00000450865 PDS5BQ9NTI5 1447 aa11.85□□□□□ -0.51
VNN3-210ENST00000450865 FANCD2Q9BXW9 1451 aa11.83□□□□□ -0.52
VNN3-210ENST00000450865 NPM1P06748 294 aaKnown RBP eCLIP11.83□□□□□ -0.52
VNN3-210ENST00000450865 CEP164Q9UPV0 1460 aa11.83□□□□□ -0.52
VNN3-210ENST00000450865 CLCN6P51797 869 aa11.81□□□□□ -0.52
VNN3-210ENST00000450865 ZRANB1Q9UGI0 708 aa11.8□□□□□ -0.52
VNN3-210ENST00000450865 PAK3O75914 559 aaPredicted RBP11.79□□□□□ -0.52
VNN3-210ENST00000450865 THOC2Q8NI27 1593 aaKnown RBP11.79□□□□□ -0.52
VNN3-210ENST00000450865 FKBP8Q14318 412 aa11.77□□□□□ -0.53
VNN3-210ENST00000450865 PLEKHG5O94827 1062 aa11.75□□□□□ -0.53
VNN3-210ENST00000450865 MNX1P50219 401 aaPredicted RBP11.75□□□□□ -0.53
VNN3-210ENST00000450865 ZNF579Q8NAF0 562 aaKnown RBP11.75□□□□□ -0.53
VNN3-210ENST00000450865 MRC2Q9UBG0 1479 aa11.75□□□□□ -0.53
VNN3-210ENST00000450865 ABCC8Q09428 1581 aa11.72□□□□□ -0.53
VNN3-210ENST00000450865 DNMBPQ6XZF7 1577 aa11.71□□□□□ -0.53
VNN3-210ENST00000450865 WDR62O43379 1518 aa11.71□□□□□ -0.53
VNN3-210ENST00000450865 MIER1Q8N108 512 aa11.7□□□□□ -0.54
VNN3-210ENST00000450865 URB2Q14146 1524 aaKnown RBP11.69□□□□□ -0.54
VNN3-210ENST00000450865 BIVM-ERCC5R4GMW8 1640 aa11.68□□□□□ -0.54
VNN3-210ENST00000450865 SYNJ1O43426 1573 aa11.67□□□□□ -0.54
VNN3-210ENST00000450865 TOPBP1Q92547 1522 aa11.66□□□□□ -0.54
VNN3-210ENST00000450865 WRNQ14191 1432 aaPredicted RBP eCLIP11.66□□□□□ -0.54
VNN3-210ENST00000450865 CUX1P39880 1505 aa11.65□□□□□ -0.54
VNN3-210ENST00000450865 TOP2BQ02880 1626 aa11.65□□□□□ -0.54
VNN3-210ENST00000450865 PLCD3Q8N3E9 789 aa11.64□□□□□ -0.55
VNN3-210ENST00000450865 DCBLD2Q96PD2 775 aa11.64□□□□□ -0.55
VNN3-210ENST00000450865 CUX2O14529 1486 aa11.63□□□□□ -0.55
VNN3-210ENST00000450865 PHF12Q96QT6 1004 aa11.61□□□□□ -0.55
VNN3-210ENST00000450865 FGD5Q6ZNL6 1462 aa11.6□□□□□ -0.55
VNN3-210ENST00000450865 POTEIP0CG38 1075 aa11.59□□□□□ -0.55
VNN3-210ENST00000450865 GALR2O43603 387 aaPredicted RBP11.58□□□□□ -0.56
VNN3-210ENST00000450865 TSPYL2Q9H2G4 693 aaPredicted RBP11.58□□□□□ -0.56
VNN3-210ENST00000450865 POLA1P09884 1462 aaPredicted RBP11.57□□□□□ -0.56
VNN3-210ENST00000450865 WDR97A6NE52 1622 aa11.57□□□□□ -0.56
VNN3-210ENST00000450865 ZBTB47Q9UFB7 747 aaPredicted RBP11.57□□□□□ -0.56
VNN3-210ENST00000450865 TARBP1Q13395 1621 aaKnown RBP11.54□□□□□ -0.56
VNN3-210ENST00000450865 FBXO3Q9UK99 471 aa11.54□□□□□ -0.56
VNN3-210ENST00000450865 IFT140Q96RY7 1462 aa11.53□□□□□ -0.56
VNN3-210ENST00000450865 POTEMA6NI47 508 aa11.53□□□□□ -0.56
VNN3-210ENST00000450865 EIF4G3O43432 1585 aaKnown RBP11.52□□□□□ -0.57
VNN3-210ENST00000450865 RAD54L2Q9Y4B4 1467 aa11.51□□□□□ -0.57
VNN3-210ENST00000450865 PBRM1Q86U86 1689 aa11.5□□□□□ -0.57
VNN3-210ENST00000450865 TRIM41Q8WV44 630 aa11.5□□□□□ -0.57
VNN3-210ENST00000450865 SOGA1O94964 1423 aa11.5□□□□□ -0.57
VNN3-210ENST00000450865 CCDC61Q9Y6R9 512 aa11.49□□□□□ -0.57
VNN3-210ENST00000450865 ABCA5Q8WWZ7 1642 aa11.47□□□□□ -0.57
VNN3-210ENST00000450865 ABCA10Q8WWZ4 1543 aa11.47□□□□□ -0.57
VNN3-210ENST00000450865 RASEFQ8IZ41 740 aa11.47□□□□□ -0.57
VNN3-210ENST00000450865 MS4A3Q96HJ5 214 aa11.46□□□□□ -0.57
VNN3-210ENST00000450865 ZNF608Q9ULD9 1512 aaPredicted RBP11.45□□□□□ -0.58
VNN3-210ENST00000450865 POTEGQ6S5H5 508 aa11.45□□□□□ -0.58
VNN3-210ENST00000450865 KIF12Q96FN5 646 aa11.42□□□□□ -0.58
VNN3-210ENST00000450865 TDRD9Q8NDG6 1382 aaKnown RBP11.41□□□□□ -0.58
VNN3-210ENST00000450865 GAPVD1Q14C86 1478 aa11.4□□□□□ -0.58
VNN3-210ENST00000450865 NUBP1P53384 320 aa11.4□□□□□ -0.58
VNN3-210ENST00000450865 AQRO60306 1485 aaKnown RBP eCLIP11.39□□□□□ -0.59
VNN3-210ENST00000450865 KIF27Q86VH2 1401 aa11.39□□□□□ -0.59
VNN3-210ENST00000450865 FAM212AQ96EL1 285 aa11.39□□□□□ -0.59
VNN3-210ENST00000450865 CHD1O14646 1710 aa11.38□□□□□ -0.59
VNN3-210ENST00000450865 CUL7Q14999 1698 aa11.37□□□□□ -0.59
VNN3-210ENST00000450865 GRIN2BQ13224 1484 aa11.37□□□□□ -0.59
VNN3-210ENST00000450865 ERICH3Q5RHP9 1530 aa11.36□□□□□ -0.59
VNN3-210ENST00000450865 MAP3K13O43283 966 aa11.36□□□□□ -0.59
VNN3-210ENST00000450865 ASTLQ6HA08 431 aaPredicted RBP11.36□□□□□ -0.59
VNN3-210ENST00000450865 OTUD5Q96G74 571 aa11.36□□□□□ -0.59
VNN3-210ENST00000450865 ADAMTS12P58397 1594 aa11.36□□□□□ -0.59
VNN3-210ENST00000450865 VASPP50552 380 aaPredicted RBP11.35□□□□□ -0.59
VNN3-210ENST00000450865 SNAPC4Q5SXM2 1469 aa11.35□□□□□ -0.59
VNN3-210ENST00000450865 ATMINO43313 823 aaPredicted RBP11.34□□□□□ -0.59
VNN3-210ENST00000450865 PCDH10Q9P2E7 1040 aa11.34□□□□□ -0.59
VNN3-210ENST00000450865 MAGI1Q96QZ7 1491 aaPredicted RBP11.33□□□□□ -0.6
VNN3-210ENST00000450865 RUSC2Q8N2Y8 1516 aa11.33□□□□□ -0.6
VNN3-210ENST00000450865 PELP1Q8IZL8 1130 aaKnown RBP11.32□□□□□ -0.6
VNN3-210ENST00000450865 KLHL34Q8N239 644 aa11.32□□□□□ -0.6
VNN3-210ENST00000450865 EEA1Q15075 1411 aa11.32□□□□□ -0.6
VNN3-210ENST00000450865 SGIP1Q9BQI5 828 aa11.3□□□□□ -0.6
VNN3-210ENST00000450865 DCAF8Q5TAQ9 597 aa11.29□□□□□ -0.6
VNN3-210ENST00000450865 SLC39A7Q92504 469 aa11.29□□□□□ -0.6
VNN3-210ENST00000450865 PCDHB13Q9Y5F0 798 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms