RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 RRP7BPQ9NSQ0 103 aa16.91■□□□□ 0.3
UBE3B-204ENST00000449510 DHX57Q6P158 1386 aaKnown RBP16.9■□□□□ 0.3
UBE3B-204ENST00000449510 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.86■□□□□ 0.29
UBE3B-204ENST00000449510 NOP58Q9Y2X3 529 aaKnown RBP16.86■□□□□ 0.29
UBE3B-204ENST00000449510 PPP4R2Q9NY27 417 aa16.85■□□□□ 0.29
UBE3B-204ENST00000449510 VPS8Q8N3P4 1428 aa16.84■□□□□ 0.29
UBE3B-204ENST00000449510 BAZ1BQ9UIG0 1483 aaKnown RBP16.83■□□□□ 0.28
UBE3B-204ENST00000449510 CCNB3Q8WWL7 1395 aa16.83■□□□□ 0.28
UBE3B-204ENST00000449510 EEA1Q15075 1411 aa16.82■□□□□ 0.28
UBE3B-204ENST00000449510 WIZO95785 1651 aa16.82■□□□□ 0.28
UBE3B-204ENST00000449510 CEP164Q9UPV0 1460 aa16.82■□□□□ 0.28
UBE3B-204ENST00000449510 TMC1Q8TDI8 760 aa16.81■□□□□ 0.28
UBE3B-204ENST00000449510 RAB3GAP2Q9H2M9 1393 aa16.81■□□□□ 0.28
UBE3B-204ENST00000449510 EIF4G2P78344 907 aaKnown RBP eCLIP16.8■□□□□ 0.28
UBE3B-204ENST00000449510 MSH5O43196 834 aa16.77■□□□□ 0.27
UBE3B-204ENST00000449510 ZNF777Q9ULD5 760 aaPredicted RBP16.77■□□□□ 0.27
UBE3B-204ENST00000449510 FOXD1Q16676 465 aa16.76■□□□□ 0.27
UBE3B-204ENST00000449510 NEFMP07197 916 aa16.76■□□□□ 0.27
UBE3B-204ENST00000449510 MYT1LQ9UL68 1186 aa16.75■□□□□ 0.27
UBE3B-204ENST00000449510 SLC4A1APQ9BWU0 796 aaKnown RBP16.75■□□□□ 0.27
UBE3B-204ENST00000449510 KDM2AQ9Y2K7 1162 aa16.75■□□□□ 0.27
UBE3B-204ENST00000449510 CCER2I3L3R5 266 aa16.73■□□□□ 0.27
UBE3B-204ENST00000449510 PPP1R15AO75807 674 aaPredicted RBP16.73■□□□□ 0.27
UBE3B-204ENST00000449510 RAPGEF2Q9Y4G8 1499 aa16.7■□□□□ 0.26
UBE3B-204ENST00000449510 HSPA5P11021 654 aaKnown RBP16.69■□□□□ 0.26
UBE3B-204ENST00000449510 ANO8Q9HCE9 1232 aaPredicted RBP16.66■□□□□ 0.26
UBE3B-204ENST00000449510 MTUS2Q5JR59 1369 aa16.64■□□□□ 0.25
UBE3B-204ENST00000449510 PAK3O75914 559 aaPredicted RBP16.63■□□□□ 0.25
UBE3B-204ENST00000449510 SETD5Q9C0A6 1442 aa16.62■□□□□ 0.25
UBE3B-204ENST00000449510 CCDC184Q52MB2 194 aa16.56■□□□□ 0.24
UBE3B-204ENST00000449510 CANXP27824 592 aaKnown RBP16.56■□□□□ 0.24
UBE3B-204ENST00000449510 SLC4A3P48751 1232 aa16.56■□□□□ 0.24
UBE3B-204ENST00000449510 FANCIQ9NVI1 1328 aa16.56■□□□□ 0.24
UBE3B-204ENST00000449510 RGS3P49796 1198 aa16.55■□□□□ 0.24
UBE3B-204ENST00000449510 BAZ1AQ9NRL2 1556 aaPredicted RBP16.55■□□□□ 0.24
UBE3B-204ENST00000449510 IL27Q8NEV9 243 aa16.54■□□□□ 0.24
UBE3B-204ENST00000449510 IPO9Q96P70 1041 aaKnown RBP16.52■□□□□ 0.24
UBE3B-204ENST00000449510 FBLN2P98095 1184 aa16.52■□□□□ 0.24
UBE3B-204ENST00000449510 RGL3Q3MIN7 710 aa16.49■□□□□ 0.23
UBE3B-204ENST00000449510 L3MBTL2Q969R5 705 aa16.48■□□□□ 0.23
UBE3B-204ENST00000449510 KIF27Q86VH2 1401 aa16.46■□□□□ 0.23
UBE3B-204ENST00000449510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.45■□□□□ 0.22
UBE3B-204ENST00000449510 PRKCSHP14314 528 aaPredicted RBP16.44■□□□□ 0.22
UBE3B-204ENST00000449510 TIMELESSQ9UNS1 1208 aa16.44■□□□□ 0.22
UBE3B-204ENST00000449510 PRKRIP1Q9H875 184 aaPredicted RBP16.43■□□□□ 0.22
UBE3B-204ENST00000449510 PLIN1O60240 522 aa16.43■□□□□ 0.22
UBE3B-204ENST00000449510 CC2D1BQ5T0F9 858 aaKnown RBP16.42■□□□□ 0.22
UBE3B-204ENST00000449510 ARID4BQ4LE39 1312 aaPredicted RBP16.42■□□□□ 0.22
UBE3B-204ENST00000449510 PPM1GO15355 546 aaPredicted RBP16.41■□□□□ 0.22
UBE3B-204ENST00000449510 CARD11Q9BXL7 1154 aa16.4■□□□□ 0.22
UBE3B-204ENST00000449510 NACADO15069 1562 aa16.4■□□□□ 0.22
UBE3B-204ENST00000449510 EXOC6Q8TAG9 804 aa16.39■□□□□ 0.22
UBE3B-204ENST00000449510 SPRYD3Q8NCJ5 442 aa16.39■□□□□ 0.21
UBE3B-204ENST00000449510 SENP3Q9H4L4 574 aaPredicted RBP16.37■□□□□ 0.21
UBE3B-204ENST00000449510 WASHC2AQ641Q2 1341 aa16.37■□□□□ 0.21
UBE3B-204ENST00000449510 NUDCQ9Y266 331 aa16.36■□□□□ 0.21
UBE3B-204ENST00000449510 KIF21BO75037 1637 aa16.36■□□□□ 0.21
UBE3B-204ENST00000449510 CARMIL1Q5VZK9 1371 aa16.35■□□□□ 0.21
UBE3B-204ENST00000449510 SKAP1Q86WV1 359 aa16.35■□□□□ 0.21
UBE3B-204ENST00000449510 MPHOSPH9Q99550 1183 aa16.35■□□□□ 0.21
UBE3B-204ENST00000449510 ERICH6BQ5W0A0 696 aa16.34■□□□□ 0.21
UBE3B-204ENST00000449510 NEUROD2Q15784 382 aa16.34■□□□□ 0.21
UBE3B-204ENST00000449510 RCAN3Q9UKA8 241 aa16.34■□□□□ 0.21
UBE3B-204ENST00000449510 PDE4AP27815 886 aa16.33■□□□□ 0.21
UBE3B-204ENST00000449510 DDRGK1Q96HY6 314 aa16.33■□□□□ 0.2
UBE3B-204ENST00000449510 PHLDB1Q86UU1 1377 aa16.33■□□□□ 0.2
UBE3B-204ENST00000449510 WDR43Q15061 677 aaKnown RBP eCLIP16.32■□□□□ 0.2
UBE3B-204ENST00000449510 SLKQ9H2G2 1235 aaPredicted RBP16.32■□□□□ 0.2
UBE3B-204ENST00000449510 BRPF3Q9ULD4 1205 aa16.32■□□□□ 0.2
UBE3B-204ENST00000449510 TOP2AP11388 1531 aaKnown RBP16.32■□□□□ 0.2
UBE3B-204ENST00000449510 CUX2O14529 1486 aa16.32■□□□□ 0.2
UBE3B-204ENST00000449510 WDR97A6NE52 1622 aa16.32■□□□□ 0.2
UBE3B-204ENST00000449510 GZF1Q9H116 711 aaPredicted RBP16.29■□□□□ 0.2
UBE3B-204ENST00000449510 NAP1L5Q96NT1 182 aaPredicted RBP16.29■□□□□ 0.2
UBE3B-204ENST00000449510 ARAP1Q96P48 1450 aa16.29■□□□□ 0.2
UBE3B-204ENST00000449510 ZBED9Q6R2W3 1325 aa16.28■□□□□ 0.2
UBE3B-204ENST00000449510 HSP90AA1P07900 732 aaKnown RBP16.28■□□□□ 0.2
UBE3B-204ENST00000449510 DCAF11Q8TEB1 546 aa16.28■□□□□ 0.2
UBE3B-204ENST00000449510 FHOD3Q2V2M9 1422 aa16.27■□□□□ 0.2
UBE3B-204ENST00000449510 AKNAQ7Z591 1439 aa16.27■□□□□ 0.2
UBE3B-204ENST00000449510 UPF2Q9HAU5 1272 aaKnown RBP16.27■□□□□ 0.19
UBE3B-204ENST00000449510 FRAT1Q92837 279 aaPredicted RBP16.26■□□□□ 0.19
UBE3B-204ENST00000449510 ARHGAP35Q9NRY4 1499 aa16.24■□□□□ 0.19
UBE3B-204ENST00000449510 C11orf95C9JLR9 678 aaPredicted RBP16.24■□□□□ 0.19
UBE3B-204ENST00000449510 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.24■□□□□ 0.19
UBE3B-204ENST00000449510 TCERG1O14776 1098 aaKnown RBP16.24■□□□□ 0.19
UBE3B-204ENST00000449510 SMARCA2P51531 1590 aa16.24■□□□□ 0.19
UBE3B-204ENST00000449510 TNNT2P45379 298 aaPredicted RBP16.22■□□□□ 0.19
UBE3B-204ENST00000449510 PKD2Q13563 968 aa16.2■□□□□ 0.18
UBE3B-204ENST00000449510 GSE1Q14687 1217 aa16.2■□□□□ 0.18
UBE3B-204ENST00000449510 FHAD1B1AJZ9 1412 aa16.19■□□□□ 0.18
UBE3B-204ENST00000449510 GLIPR1L2Q4G1C9 344 aa16.19■□□□□ 0.18
UBE3B-204ENST00000449510 CDCA7LQ96GN5 454 aa16.19■□□□□ 0.18
UBE3B-204ENST00000449510 CFDP1Q9UEE9 299 aaPredicted RBP16.19■□□□□ 0.18
UBE3B-204ENST00000449510 KIF7Q2M1P5 1343 aa16.18■□□□□ 0.18
UBE3B-204ENST00000449510 TSPY4P0CV99 314 aa16.17■□□□□ 0.18
UBE3B-204ENST00000449510 TSPY10P0CW01 314 aa16.17■□□□□ 0.18
UBE3B-204ENST00000449510 CRBNQ96SW2 442 aa16.17■□□□□ 0.18
UBE3B-204ENST00000449510 ST20-MTHFSA0A0A6YYL1 179 aa16.16■□□□□ 0.18
UBE3B-204ENST00000449510 RRP1P56182 461 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms