RNA–Protein interactions for RNA: ENST00000448327.1

LINC01564-201, Transcript of long intergenic non-protein coding RNA 1564, humanhuman

TSL 3 BASIC

Gene LINC01564, Length 566 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01564-201ENST00000448327 ASTLQ6HA08 431 aaPredicted RBP11.44□□□□□ -0.58
LINC01564-201ENST00000448327 PROM2Q8N271 834 aa11.43□□□□□ -0.58
LINC01564-201ENST00000448327 SLC39A7Q92504 469 aa11.43□□□□□ -0.58
LINC01564-201ENST00000448327 ATMINO43313 823 aaPredicted RBP11.42□□□□□ -0.58
LINC01564-201ENST00000448327 C7P10643 843 aa11.41□□□□□ -0.58
LINC01564-201ENST00000448327 CCDC61Q9Y6R9 512 aa11.39□□□□□ -0.59
LINC01564-201ENST00000448327 MIER1Q8N108 512 aa11.38□□□□□ -0.59
LINC01564-201ENST00000448327 POTEMA6NI47 508 aa11.35□□□□□ -0.59
LINC01564-201ENST00000448327 MAMSTRQ6ZN01 415 aa11.34□□□□□ -0.59
LINC01564-201ENST00000448327 KIF12Q96FN5 646 aa11.34□□□□□ -0.59
LINC01564-201ENST00000448327 ATN1P54259 1190 aaPredicted RBP11.33□□□□□ -0.6
LINC01564-201ENST00000448327 POTEGQ6S5H5 508 aa11.31□□□□□ -0.6
LINC01564-201ENST00000448327 RASEFQ8IZ41 740 aa11.29□□□□□ -0.6
LINC01564-201ENST00000448327 PLCD3Q8N3E9 789 aa11.29□□□□□ -0.6
LINC01564-201ENST00000448327 MAP3K13O43283 966 aa11.28□□□□□ -0.6
LINC01564-201ENST00000448327 POTEJP0CG39 1038 aa11.28□□□□□ -0.6
LINC01564-201ENST00000448327 SCUBE2Q9NQ36 999 aa11.28□□□□□ -0.6
LINC01564-201ENST00000448327 BMP2KQ9NSY1 1161 aaPredicted RBP11.27□□□□□ -0.61
LINC01564-201ENST00000448327 TRPC6Q9Y210 931 aa11.25□□□□□ -0.61
LINC01564-201ENST00000448327 TIE1P35590 1138 aa11.23□□□□□ -0.61
LINC01564-201ENST00000448327 SEC24BO95487 1268 aa11.2□□□□□ -0.62
LINC01564-201ENST00000448327 ZBTB47Q9UFB7 747 aaPredicted RBP11.2□□□□□ -0.62
LINC01564-201ENST00000448327 FAM163AQ96GL9 167 aaPredicted RBP11.19□□□□□ -0.62
LINC01564-201ENST00000448327 POTEFA5A3E0 1075 aa11.17□□□□□ -0.62
LINC01564-201ENST00000448327 TTLL13PA6NNM8 815 aa11.17□□□□□ -0.62
LINC01564-201ENST00000448327 PCDHB13Q9Y5F0 798 aa11.17□□□□□ -0.62
LINC01564-201ENST00000448327 PCDH10Q9P2E7 1040 aa11.15□□□□□ -0.62
LINC01564-201ENST00000448327 SGIP1Q9BQI5 828 aa11.13□□□□□ -0.63
LINC01564-201ENST00000448327 TRIM35Q9UPQ4 493 aa11.13□□□□□ -0.63
LINC01564-201ENST00000448327 COLQQ9Y215 455 aaPredicted RBP11.12□□□□□ -0.63
LINC01564-201ENST00000448327 FAM212AQ96EL1 285 aa11.11□□□□□ -0.63
LINC01564-201ENST00000448327 NUBP1P53384 320 aa11.09□□□□□ -0.63
LINC01564-201ENST00000448327 IER5LQ5T953 404 aa11.08□□□□□ -0.64
LINC01564-201ENST00000448327 LCE2DQ5TA82 110 aaPredicted RBP11.08□□□□□ -0.64
LINC01564-201ENST00000448327 FKBP8Q14318 412 aa11.06□□□□□ -0.64
LINC01564-201ENST00000448327 IFNL1Q8IU54 200 aa11.06□□□□□ -0.64
LINC01564-201ENST00000448327 TMEM106CQ9BVX2 250 aa11.05□□□□□ -0.64
LINC01564-201ENST00000448327 PLCG2P16885 1265 aa11.01□□□□□ -0.65
LINC01564-201ENST00000448327 SLAIN1Q8ND83 568 aa10.99□□□□□ -0.65
LINC01564-201ENST00000448327 DCAF8Q5TAQ9 597 aa10.98□□□□□ -0.65
LINC01564-201ENST00000448327 PYGBP11216 843 aa10.95□□□□□ -0.66
LINC01564-201ENST00000448327 CDAN1Q8IWY9 1227 aa10.91□□□□□ -0.66
LINC01564-201ENST00000448327 FBXO3Q9UK99 471 aa10.91□□□□□ -0.66
LINC01564-201ENST00000448327 IRX5P78411 483 aaPredicted RBP10.9□□□□□ -0.66
LINC01564-201ENST00000448327 ST18O60284 1047 aa10.88□□□□□ -0.67
LINC01564-201ENST00000448327 OCEL1Q9H607 264 aa10.88□□□□□ -0.67
LINC01564-201ENST00000448327 PCDHB8Q9UN66 801 aa10.88□□□□□ -0.67
LINC01564-201ENST00000448327 KLHL34Q8N239 644 aa10.86□□□□□ -0.67
LINC01564-201ENST00000448327 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.83□□□□□ -0.68
LINC01564-201ENST00000448327 GOLGA2Q08379 1002 aa10.82□□□□□ -0.68
LINC01564-201ENST00000448327 SNPHO15079 494 aa10.8□□□□□ -0.68
LINC01564-201ENST00000448327 GSE1Q14687 1217 aa10.8□□□□□ -0.68
LINC01564-201ENST00000448327 ZNF467Q7Z7K2 595 aaPredicted RBP10.78□□□□□ -0.68
LINC01564-201ENST00000448327 MKRN3Q13064 507 aaKnown RBP10.77□□□□□ -0.69
LINC01564-201ENST00000448327 VASPP50552 380 aaPredicted RBP10.76□□□□□ -0.69
LINC01564-201ENST00000448327 TMEM121BQ9BXQ6 578 aaPredicted RBP10.76□□□□□ -0.69
LINC01564-201ENST00000448327 C3orf67Q6ZVT6 689 aa10.75□□□□□ -0.69
LINC01564-201ENST00000448327 MARVELD3Q96A59 401 aa10.72□□□□□ -0.69
LINC01564-201ENST00000448327 PDCD7Q8N8D1 485 aaKnown RBP10.71□□□□□ -0.69
LINC01564-201ENST00000448327 L3MBTL3Q96JM7 780 aaPredicted RBP10.71□□□□□ -0.69
LINC01564-201ENST00000448327 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.7□□□□□ -0.7
LINC01564-201ENST00000448327 PSEN1P49768 467 aa10.69□□□□□ -0.7
LINC01564-201ENST00000448327 CHRM1P11229 460 aaPredicted RBP10.67□□□□□ -0.7
LINC01564-201ENST00000448327 EMP3P54852 163 aa10.64□□□□□ -0.71
LINC01564-201ENST00000448327 MMRN1Q13201 1228 aa10.63□□□□□ -0.71
LINC01564-201ENST00000448327 SPNS2Q8IVW8 549 aa10.63□□□□□ -0.71
LINC01564-201ENST00000448327 PDAP1Q13442 181 aaKnown RBP10.62□□□□□ -0.71
LINC01564-201ENST00000448327 CIZ1Q9ULV3 898 aaPredicted RBP10.62□□□□□ -0.71
LINC01564-201ENST00000448327 G3V3G9 751 aa10.61□□□□□ -0.71
LINC01564-201ENST00000448327 SPOCK2Q92563 424 aa10.58□□□□□ -0.72
LINC01564-201ENST00000448327 CABP2Q9NPB3 220 aa10.58□□□□□ -0.72
LINC01564-201ENST00000448327 FAM205CA6NFA0 338 aa10.55□□□□□ -0.72
LINC01564-201ENST00000448327 DPY19L2Q6NUT2 758 aa10.55□□□□□ -0.72
LINC01564-201ENST00000448327 HS3ST6Q96QI5 342 aa10.54□□□□□ -0.72
LINC01564-201ENST00000448327 BOLA1Q9Y3E2 137 aa10.53□□□□□ -0.72
LINC01564-201ENST00000448327 IFNLR1Q8IU57 520 aaPredicted RBP10.52□□□□□ -0.73
LINC01564-201ENST00000448327 ILDR1Q86SU0 546 aaPredicted RBP10.51□□□□□ -0.73
LINC01564-201ENST00000448327 ZNF710Q8N1W2 664 aa10.48□□□□□ -0.73
LINC01564-201ENST00000448327 POTEB3A0JP26 581 aa10.46□□□□□ -0.73
LINC01564-201ENST00000448327 POTEBQ6S5H4 581 aa10.46□□□□□ -0.73
LINC01564-201ENST00000448327 KRTAP3-3Q9BYR6 98 aa10.45□□□□□ -0.74
LINC01564-201ENST00000448327 KRTAP3-2Q9BYR7 98 aa10.45□□□□□ -0.74
LINC01564-201ENST00000448327 HOXB3P14651 431 aaPredicted RBP10.42□□□□□ -0.74
LINC01564-201ENST00000448327 DOK7Q18PE1 504 aa10.42□□□□□ -0.74
LINC01564-201ENST00000448327 EFCAB3Q8N7B9 438 aa10.4□□□□□ -0.74
LINC01564-201ENST00000448327 ERBB3P21860 1342 aa10.39□□□□□ -0.75
LINC01564-201ENST00000448327 HOXB1P14653 301 aaPredicted RBP10.39□□□□□ -0.75
LINC01564-201ENST00000448327 TRIM41Q8WV44 630 aa10.39□□□□□ -0.75
LINC01564-201ENST00000448327 RIMBP2O15034 1052 aa10.38□□□□□ -0.75
LINC01564-201ENST00000448327 VARS2Q5ST30 1063 aaKnown RBP10.31□□□□□ -0.76
LINC01564-201ENST00000448327 MICALL2Q8IY33 904 aa10.31□□□□□ -0.76
LINC01564-201ENST00000448327 RIOK3O14730 519 aaKnown RBP10.28□□□□□ -0.76
LINC01564-201ENST00000448327 SOX12O15370 315 aa10.28□□□□□ -0.76
LINC01564-201ENST00000448327 TMEM92Q6UXU6 159 aa10.26□□□□□ -0.77
LINC01564-201ENST00000448327 RNF166Q96A37 237 aaPredicted RBP10.26□□□□□ -0.77
LINC01564-201ENST00000448327 ZSWIM6Q9HCJ5 1215 aa10.26□□□□□ -0.77
LINC01564-201ENST00000448327 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.25□□□□□ -0.77
LINC01564-201ENST00000448327 ZFP91Q96JP5 570 aaPredicted RBP10.25□□□□□ -0.77
LINC01564-201ENST00000448327 VGFO15240 615 aaPredicted RBP10.24□□□□□ -0.77
LINC01564-201ENST00000448327 PHF8Q9UPP1 1060 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms