RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 PPM1GO15355 546 aaPredicted RBP21.46■■□□□ 1.03
SIK3-205ENST00000446921 DHX57Q6P158 1386 aaKnown RBP21.45■■□□□ 1.03
SIK3-205ENST00000446921 FAM9BQ8IZU0 186 aa21.45■■□□□ 1.02
SIK3-205ENST00000446921 NAP1L5Q96NT1 182 aaPredicted RBP21.44■■□□□ 1.02
SIK3-205ENST00000446921 SIN3AQ96ST3 1273 aa21.44■■□□□ 1.02
SIK3-205ENST00000446921 RSF1Q96T23 1441 aaPredicted RBP21.42■■□□□ 1.02
SIK3-205ENST00000446921 PDIA4P13667 645 aaKnown RBP21.42■■□□□ 1.02
SIK3-205ENST00000446921 GSE1Q14687 1217 aa21.42■■□□□ 1.02
SIK3-205ENST00000446921 RBM10P98175 930 aaKnown RBP21.42■■□□□ 1.02
SIK3-205ENST00000446921 ARXQ96QS3 562 aa21.39■■□□□ 1.01
SIK3-205ENST00000446921 USP35Q9P2H5 1018 aa21.39■■□□□ 1.01
SIK3-205ENST00000446921 TNIKQ9UKE5 1360 aa21.37■■□□□ 1.01
SIK3-205ENST00000446921 RB1CC1Q8TDY2 1594 aa21.35■■□□□ 1.01
SIK3-205ENST00000446921 BCL11BQ9C0K0 894 aaPredicted RBP21.35■■□□□ 1.01
SIK3-205ENST00000446921 ARID4BQ4LE39 1312 aaPredicted RBP21.33■■□□□ 1.01
SIK3-205ENST00000446921 SENP3-EIF4A1A0A087X0R7 540 aa21.31■■□□□ 1
SIK3-205ENST00000446921 HSP90AA1P07900 732 aaKnown RBP21.31■■□□□ 1
SIK3-205ENST00000446921 AEBP2Q6ZN18 517 aaPredicted RBP21.31■■□□□ 1
SIK3-205ENST00000446921 C11orf95C9JLR9 678 aaPredicted RBP21.3■■□□□ 1
SIK3-205ENST00000446921 WASHC2AQ641Q2 1341 aa21.3■■□□□ 1
SIK3-205ENST00000446921 FRAT1Q92837 279 aaPredicted RBP21.3■■□□□ 1
SIK3-205ENST00000446921 BAZ1BQ9UIG0 1483 aaKnown RBP21.28■■□□□ 1
SIK3-205ENST00000446921 PPP1R15AO75807 674 aaPredicted RBP21.27■■□□□ 1
SIK3-205ENST00000446921 FGD1P98174 961 aa21.27■■□□□ 1
SIK3-205ENST00000446921 WASHC2CQ9Y4E1 1318 aa21.2■□□□□ 0.98
SIK3-205ENST00000446921 SLC4A3P48751 1232 aa21.2■□□□□ 0.98
SIK3-205ENST00000446921 FAM43AQ8N2R8 423 aa21.19■□□□□ 0.98
SIK3-205ENST00000446921 MRS2Q9HD23 443 aa21.18■□□□□ 0.98
SIK3-205ENST00000446921 AAMPQ13685 434 aa21.17■□□□□ 0.98
SIK3-205ENST00000446921 NFKBIBQ15653 356 aa21.16■□□□□ 0.98
SIK3-205ENST00000446921 PNNQ9H307 717 aaKnown RBP21.14■□□□□ 0.97
SIK3-205ENST00000446921 SOGA1O94964 1423 aa21.13■□□□□ 0.97
SIK3-205ENST00000446921 CLIP1P30622 1438 aa21.12■□□□□ 0.97
SIK3-205ENST00000446921 DDRGK1Q96HY6 314 aa21.1■□□□□ 0.97
SIK3-205ENST00000446921 PDE4AP27815 886 aa21.07■□□□□ 0.96
SIK3-205ENST00000446921 POLR3GLQ9BT43 218 aa21.05■□□□□ 0.96
SIK3-205ENST00000446921 EEA1Q15075 1411 aa21.05■□□□□ 0.96
SIK3-205ENST00000446921 FAM50AQ14320 339 aaKnown RBP21.04■□□□□ 0.96
SIK3-205ENST00000446921 RRP9O43818 475 aaKnown RBP21.03■□□□□ 0.96
SIK3-205ENST00000446921 AMER1Q5JTC6 1135 aaPredicted RBP21.02■□□□□ 0.96
SIK3-205ENST00000446921 CCDC88BA6NC98 1476 aa21■□□□□ 0.95
SIK3-205ENST00000446921 GOLGA3Q08378 1498 aa20.99■□□□□ 0.95
SIK3-205ENST00000446921 ABCC9O60706 1549 aa20.98■□□□□ 0.95
SIK3-205ENST00000446921 ABCC8Q09428 1581 aa20.97■□□□□ 0.95
SIK3-205ENST00000446921 TCERG1O14776 1098 aaKnown RBP20.96■□□□□ 0.95
SIK3-205ENST00000446921 FRAT2O75474 233 aaPredicted RBP20.96■□□□□ 0.95
SIK3-205ENST00000446921 KANK4Q5T7N3 995 aaPredicted RBP20.96■□□□□ 0.95
SIK3-205ENST00000446921 PAXIP1Q6ZW49 1069 aaPredicted RBP20.96■□□□□ 0.95
SIK3-205ENST00000446921 TONSLQ96HA7 1378 aa20.95■□□□□ 0.95
SIK3-205ENST00000446921 DCAF11Q8TEB1 546 aa20.95■□□□□ 0.94
SIK3-205ENST00000446921 CCDC184Q52MB2 194 aa20.95■□□□□ 0.94
SIK3-205ENST00000446921 BBXQ8WY36 941 aaPredicted RBP20.93■□□□□ 0.94
SIK3-205ENST00000446921 KLHL34Q8N239 644 aa20.93■□□□□ 0.94
SIK3-205ENST00000446921 VPS8Q8N3P4 1428 aa20.92■□□□□ 0.94
SIK3-205ENST00000446921 NACADO15069 1562 aa20.92■□□□□ 0.94
SIK3-205ENST00000446921 RGS3P49796 1198 aa20.92■□□□□ 0.94
SIK3-205ENST00000446921 ATP1B4Q9UN42 357 aaPredicted RBP20.92■□□□□ 0.94
SIK3-205ENST00000446921 RRAGDQ9NQL2 400 aaPredicted RBP20.91■□□□□ 0.94
SIK3-205ENST00000446921 TAF7LQ5H9L4 462 aa20.91■□□□□ 0.94
SIK3-205ENST00000446921 RAB3GAP2Q9H2M9 1393 aa20.89■□□□□ 0.93
SIK3-205ENST00000446921 ARID3AQ99856 593 aa20.88■□□□□ 0.93
SIK3-205ENST00000446921 RUSC2Q8N2Y8 1516 aa20.87■□□□□ 0.93
SIK3-205ENST00000446921 AKNAQ7Z591 1439 aa20.87■□□□□ 0.93
SIK3-205ENST00000446921 ZBED9Q6R2W3 1325 aa20.86■□□□□ 0.93
SIK3-205ENST00000446921 WDR97A6NE52 1622 aa20.85■□□□□ 0.93
SIK3-205ENST00000446921 L1TD1Q5T7N2 865 aaKnown RBP20.84■□□□□ 0.93
SIK3-205ENST00000446921 BACH2Q9BYV9 841 aa20.84■□□□□ 0.93
SIK3-205ENST00000446921 CHMP4BQ9H444 224 aaKnown RBP20.84■□□□□ 0.93
SIK3-205ENST00000446921 CANXP27824 592 aaKnown RBP20.83■□□□□ 0.93
SIK3-205ENST00000446921 NUDCQ9Y266 331 aa20.81■□□□□ 0.92
SIK3-205ENST00000446921 NAP1L2Q9ULW6 460 aaPredicted RBP20.8■□□□□ 0.92
SIK3-205ENST00000446921 EXOC6Q8TAG9 804 aa20.8■□□□□ 0.92
SIK3-205ENST00000446921 GZF1Q9H116 711 aaPredicted RBP20.8■□□□□ 0.92
SIK3-205ENST00000446921 CCNB3Q8WWL7 1395 aa20.78■□□□□ 0.92
SIK3-205ENST00000446921 SKAP1Q86WV1 359 aa20.77■□□□□ 0.92
SIK3-205ENST00000446921 POGKQ9P215 609 aa20.76■□□□□ 0.91
SIK3-205ENST00000446921 TRIM44Q96DX7 344 aaPredicted RBP20.74■□□□□ 0.91
SIK3-205ENST00000446921 SLKQ9H2G2 1235 aaPredicted RBP20.74■□□□□ 0.91
SIK3-205ENST00000446921 TNNT2P45379 298 aaPredicted RBP20.71■□□□□ 0.91
SIK3-205ENST00000446921 NCLP19338 710 aaKnown RBP20.7■□□□□ 0.9
SIK3-205ENST00000446921 ZNF326Q5BKZ1 582 aaKnown RBP20.7■□□□□ 0.9
SIK3-205ENST00000446921 HSPA5P11021 654 aaKnown RBP20.69■□□□□ 0.9
SIK3-205ENST00000446921 CDK11BP21127 795 aaKnown RBP20.69■□□□□ 0.9
SIK3-205ENST00000446921 PRKRIP1Q9H875 184 aaPredicted RBP20.69■□□□□ 0.9
SIK3-205ENST00000446921 SCRIBQ14160 1630 aa20.69■□□□□ 0.9
SIK3-205ENST00000446921 GOLGA6L3A6NEY3 463 aa20.69■□□□□ 0.9
SIK3-205ENST00000446921 MS4A1P11836 297 aa20.68■□□□□ 0.9
SIK3-205ENST00000446921 EIF4G2P78344 907 aaKnown RBP eCLIP20.67■□□□□ 0.9
SIK3-205ENST00000446921 PLCD3Q8N3E9 789 aa20.65■□□□□ 0.9
SIK3-205ENST00000446921 ZHX1Q9UKY1 873 aaPredicted RBP20.64■□□□□ 0.9
SIK3-205ENST00000446921 CEP164Q9UPV0 1460 aa20.64■□□□□ 0.89
SIK3-205ENST00000446921 TMC1Q8TDI8 760 aa20.64■□□□□ 0.89
SIK3-205ENST00000446921 SETD5Q9C0A6 1442 aa20.63■□□□□ 0.89
SIK3-205ENST00000446921 FAM13BQ9NYF5 915 aa20.6■□□□□ 0.89
SIK3-205ENST00000446921 PDCL3Q9H2J4 239 aa20.59■□□□□ 0.89
SIK3-205ENST00000446921 CECR2Q9BXF3 1484 aa20.59■□□□□ 0.89
SIK3-205ENST00000446921 CLCN1P35523 988 aa20.59■□□□□ 0.89
SIK3-205ENST00000446921 MYH16Q9H6N6 1097 aa20.58■□□□□ 0.89
SIK3-205ENST00000446921 SPRYD3Q8NCJ5 442 aa20.58■□□□□ 0.88
SIK3-205ENST00000446921 RRP1P56182 461 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms