RNA–Protein interactions for RNA: ENST00000446688.5

TNS1-209, Transcript of tensin 1, humanhuman

TSL 1 (best) BASIC

Gene TNS1, Length 4,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS1-209ENST00000446688 SMARCA4P51532 1647 aa13.5□□□□□ -0.25
TNS1-209ENST00000446688 KCNH8Q96L42 1107 aa13.5□□□□□ -0.25
TNS1-209ENST00000446688 RBM19Q9Y4C8 960 aaKnown RBP13.49□□□□□ -0.25
TNS1-209ENST00000446688 FAM9BQ8IZU0 186 aa13.48□□□□□ -0.25
TNS1-209ENST00000446688 CEP164Q9UPV0 1460 aa13.48□□□□□ -0.25
TNS1-209ENST00000446688 ATAD2BQ9ULI0 1458 aa13.48□□□□□ -0.25
TNS1-209ENST00000446688 SALL2Q9Y467 1007 aaPredicted RBP13.48□□□□□ -0.25
TNS1-209ENST00000446688 RRP7BPQ9NSQ0 103 aa13.47□□□□□ -0.25
TNS1-209ENST00000446688 TOP2AP11388 1531 aaKnown RBP13.46□□□□□ -0.25
TNS1-209ENST00000446688 PLEKHD1A6NEE1 506 aa13.45□□□□□ -0.26
TNS1-209ENST00000446688 NBR1Q14596 966 aa13.44□□□□□ -0.26
TNS1-209ENST00000446688 WIZO95785 1651 aa13.44□□□□□ -0.26
TNS1-209ENST00000446688 HIRIP3Q9BW71 556 aaPredicted RBP13.44□□□□□ -0.26
TNS1-209ENST00000446688 TMC1Q8TDI8 760 aa13.43□□□□□ -0.26
TNS1-209ENST00000446688 CCDC88BA6NC98 1476 aa13.43□□□□□ -0.26
TNS1-209ENST00000446688 ERCC6Q03468 1493 aa13.42□□□□□ -0.26
TNS1-209ENST00000446688 CCER2I3L3R5 266 aa13.41□□□□□ -0.26
TNS1-209ENST00000446688 SOGA1O94964 1423 aa13.4□□□□□ -0.26
TNS1-209ENST00000446688 IRX6P78412 446 aaPredicted RBP13.39□□□□□ -0.27
TNS1-209ENST00000446688 CCDC136Q96JN2 1154 aa13.39□□□□□ -0.27
TNS1-209ENST00000446688 SENP3Q9H4L4 574 aaPredicted RBP13.39□□□□□ -0.27
TNS1-209ENST00000446688 VPS8Q8N3P4 1428 aa13.38□□□□□ -0.27
TNS1-209ENST00000446688 PPP4R2Q9NY27 417 aa13.38□□□□□ -0.27
TNS1-209ENST00000446688 PDS5BQ9NTI5 1447 aa13.37□□□□□ -0.27
TNS1-209ENST00000446688 NPM2Q86SE8 214 aaKnown RBP13.37□□□□□ -0.27
TNS1-209ENST00000446688 TIMELESSQ9UNS1 1208 aa13.37□□□□□ -0.27
TNS1-209ENST00000446688 MRS2Q9HD23 443 aa13.36□□□□□ -0.27
TNS1-209ENST00000446688 EIF4G1Q04637 1599 aaKnown RBP13.36□□□□□ -0.27
TNS1-209ENST00000446688 KIF27Q86VH2 1401 aa13.36□□□□□ -0.27
TNS1-209ENST00000446688 RGL3Q3MIN7 710 aa13.36□□□□□ -0.27
TNS1-209ENST00000446688 CFDP1Q9UEE9 299 aaPredicted RBP13.35□□□□□ -0.27
TNS1-209ENST00000446688 ERICH6BQ5W0A0 696 aa13.34□□□□□ -0.27
TNS1-209ENST00000446688 EIF4G2P78344 907 aaKnown RBP eCLIP13.34□□□□□ -0.271e-8■■■■■ 49.3
TNS1-209ENST00000446688 EIF5BO60841 1220 aaKnown RBP13.33□□□□□ -0.28
TNS1-209ENST00000446688 CADPSQ9ULU8 1353 aa13.33□□□□□ -0.28
TNS1-209ENST00000446688 NOP58Q9Y2X3 529 aaKnown RBP13.32□□□□□ -0.28
TNS1-209ENST00000446688 DEKP35659 375 aaKnown RBP13.32□□□□□ -0.28
TNS1-209ENST00000446688 NCAPD3P42695 1498 aa13.32□□□□□ -0.28
TNS1-209ENST00000446688 ABCC8Q09428 1581 aa13.32□□□□□ -0.28
TNS1-209ENST00000446688 WDR43Q15061 677 aaKnown RBP eCLIP13.31□□□□□ -0.28
TNS1-209ENST00000446688 CCNB3Q8WWL7 1395 aa13.3□□□□□ -0.28
TNS1-209ENST00000446688 PPP1R15AO75807 674 aaPredicted RBP13.28□□□□□ -0.28
TNS1-209ENST00000446688 BICRAQ9NZM4 1560 aa13.27□□□□□ -0.28
TNS1-209ENST00000446688 PLEKHG5O94827 1062 aa13.26□□□□□ -0.29
TNS1-209ENST00000446688 GLIPR1L2Q4G1C9 344 aa13.25□□□□□ -0.29
TNS1-209ENST00000446688 DHX57Q6P158 1386 aaKnown RBP13.24□□□□□ -0.29
TNS1-209ENST00000446688 SIN3AQ96ST3 1273 aa13.24□□□□□ -0.29
TNS1-209ENST00000446688 ARID4BQ4LE39 1312 aaPredicted RBP13.23□□□□□ -0.29
TNS1-209ENST00000446688 PPM1GO15355 546 aaPredicted RBP13.23□□□□□ -0.29
TNS1-209ENST00000446688 FANCIQ9NVI1 1328 aa13.22□□□□□ -0.29
TNS1-209ENST00000446688 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.22□□□□□ -0.29
TNS1-209ENST00000446688 HSP90AA1P07900 732 aaKnown RBP13.21□□□□□ -0.29
TNS1-209ENST00000446688 DDRGK1Q96HY6 314 aa13.21□□□□□ -0.29
TNS1-209ENST00000446688 C14orf37Q86TY3 774 aa13.2□□□□□ -0.3
TNS1-209ENST00000446688 UPF2Q9HAU5 1272 aaKnown RBP13.19□□□□□ -0.3
TNS1-209ENST00000446688 CARMIL1Q5VZK9 1371 aa13.19□□□□□ -0.3
TNS1-209ENST00000446688 SETD5Q9C0A6 1442 aa13.19□□□□□ -0.3
TNS1-209ENST00000446688 SENP3-EIF4A1A0A087X0R7 540 aa13.18□□□□□ -0.3
TNS1-209ENST00000446688 B4GALNT3Q6L9W6 998 aa13.18□□□□□ -0.3
TNS1-209ENST00000446688 A0A0G2JS52 829 aa13.17□□□□□ -0.3
TNS1-209ENST00000446688 ZBTB7CA1YPR0 619 aa13.17□□□□□ -0.3
TNS1-209ENST00000446688 CARD11Q9BXL7 1154 aa13.17□□□□□ -0.3
TNS1-209ENST00000446688 CUX2O14529 1486 aa13.16□□□□□ -0.3
TNS1-209ENST00000446688 CC2D2AQ9P2K1 1620 aa13.16□□□□□ -0.3
TNS1-209ENST00000446688 HMGXB3Q12766 1538 aa13.16□□□□□ -0.3
TNS1-209ENST00000446688 UNC13AQ9UPW8 1703 aa13.15□□□□□ -0.31
TNS1-209ENST00000446688 RAB3GAP2Q9H2M9 1393 aa13.14□□□□□ -0.31
TNS1-209ENST00000446688 KANK4Q5T7N3 995 aaPredicted RBP13.14□□□□□ -0.31
TNS1-209ENST00000446688 FANCD2Q9BXW9 1451 aa13.13□□□□□ -0.31
TNS1-209ENST00000446688 CDCA8Q53HL2 280 aa13.12□□□□□ -0.31
TNS1-209ENST00000446688 KNSTRNQ9Y448 316 aa13.12□□□□□ -0.31
TNS1-209ENST00000446688 RUSC2Q8N2Y8 1516 aa13.12□□□□□ -0.31
TNS1-209ENST00000446688 FHAD1B1AJZ9 1412 aa13.1□□□□□ -0.31
TNS1-209ENST00000446688 CFAP53Q96M91 514 aa13.08□□□□□ -0.31
TNS1-209ENST00000446688 TDRD9Q8NDG6 1382 aaKnown RBP13.07□□□□□ -0.32
TNS1-209ENST00000446688 RTN4Q9NQC3 1192 aaKnown RBP13.07□□□□□ -0.32
TNS1-209ENST00000446688 POGKQ9P215 609 aa13.07□□□□□ -0.32
TNS1-209ENST00000446688 IPO9Q96P70 1041 aaKnown RBP13.06□□□□□ -0.32
TNS1-209ENST00000446688 NEUROD2Q15784 382 aa13.06□□□□□ -0.32
TNS1-209ENST00000446688 LAS1LQ9Y4W2 734 aaKnown RBP13.06□□□□□ -0.32
TNS1-209ENST00000446688 MLECQ14165 292 aa13.05□□□□□ -0.32
TNS1-209ENST00000446688 MYH16Q9H6N6 1097 aa13.05□□□□□ -0.32
TNS1-209ENST00000446688 HAP1P54257 671 aaPredicted RBP13.05□□□□□ -0.32
TNS1-209ENST00000446688 DCAF11Q8TEB1 546 aa13.05□□□□□ -0.32
TNS1-209ENST00000446688 LMOD2Q6P5Q4 547 aa13.04□□□□□ -0.32
TNS1-209ENST00000446688 TRHP20396 242 aaPredicted RBP13.04□□□□□ -0.32
TNS1-209ENST00000446688 TNNT2P45379 298 aaPredicted RBP13.03□□□□□ -0.32
TNS1-209ENST00000446688 RAPGEF2Q9Y4G8 1499 aa13.02□□□□□ -0.32
TNS1-209ENST00000446688 CFTRP13569 1480 aa13.01□□□□□ -0.33
TNS1-209ENST00000446688 GGT6Q6P531 493 aa13.01□□□□□ -0.33
TNS1-209ENST00000446688 ANP32BQ92688 251 aaKnown RBP13.01□□□□□ -0.33
TNS1-209ENST00000446688 HSPA5P11021 654 aaKnown RBP13.01□□□□□ -0.33
TNS1-209ENST00000446688 USP35Q9P2H5 1018 aa12.99□□□□□ -0.33
TNS1-209ENST00000446688 TCERG1O14776 1098 aaKnown RBP12.99□□□□□ -0.33
TNS1-209ENST00000446688 BECN1Q14457 450 aa12.99□□□□□ -0.33
TNS1-209ENST00000446688 NUDCQ9Y266 331 aa12.98□□□□□ -0.33
TNS1-209ENST00000446688 PEG3Q9GZU2 1588 aa12.97□□□□□ -0.33
TNS1-209ENST00000446688 CC2D1BQ5T0F9 858 aaKnown RBP12.97□□□□□ -0.33
TNS1-209ENST00000446688 ARXQ96QS3 562 aa12.97□□□□□ -0.33
TNS1-209ENST00000446688 PKD2Q13563 968 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms