RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 C7P10643 843 aa13.96□□□□□ -0.17
LINC01004-201ENST00000445184 SLC39A7Q92504 469 aa13.96□□□□□ -0.17
LINC01004-201ENST00000445184 ATMINO43313 823 aaPredicted RBP13.94□□□□□ -0.18
LINC01004-201ENST00000445184 MAMSTRQ6ZN01 415 aa13.92□□□□□ -0.18
LINC01004-201ENST00000445184 PCDH10Q9P2E7 1040 aa13.92□□□□□ -0.18
LINC01004-201ENST00000445184 POTEJP0CG39 1038 aa13.87□□□□□ -0.19
LINC01004-201ENST00000445184 TSPYL2Q9H2G4 693 aaPredicted RBP13.84□□□□□ -0.19
LINC01004-201ENST00000445184 SCUBE2Q9NQ36 999 aa13.81□□□□□ -0.2
LINC01004-201ENST00000445184 ATN1P54259 1190 aaPredicted RBP13.79□□□□□ -0.2
LINC01004-201ENST00000445184 CCDC61Q9Y6R9 512 aa13.78□□□□□ -0.2
LINC01004-201ENST00000445184 FAM163AQ96GL9 167 aaPredicted RBP13.76□□□□□ -0.21
LINC01004-201ENST00000445184 KIF12Q96FN5 646 aa13.74□□□□□ -0.21
LINC01004-201ENST00000445184 EHMT2Q96KQ7 1210 aa13.73□□□□□ -0.21
LINC01004-201ENST00000445184 LCE2DQ5TA82 110 aaPredicted RBP13.72□□□□□ -0.21
LINC01004-201ENST00000445184 PROM2Q8N271 834 aa13.69□□□□□ -0.22
LINC01004-201ENST00000445184 BMP2KQ9NSY1 1161 aaPredicted RBP13.69□□□□□ -0.22
LINC01004-201ENST00000445184 POTEFA5A3E0 1075 aa13.66□□□□□ -0.22
LINC01004-201ENST00000445184 TIE1P35590 1138 aa13.66□□□□□ -0.22
LINC01004-201ENST00000445184 PLEKHG5O94827 1062 aa13.64□□□□□ -0.23
LINC01004-201ENST00000445184 TRPC6Q9Y210 931 aa13.64□□□□□ -0.23
LINC01004-201ENST00000445184 MAP3K13O43283 966 aa13.63□□□□□ -0.23
LINC01004-201ENST00000445184 SEC24BO95487 1268 aa13.58□□□□□ -0.24
LINC01004-201ENST00000445184 MIER1Q8N108 512 aa13.57□□□□□ -0.24
LINC01004-201ENST00000445184 RASEFQ8IZ41 740 aa13.55□□□□□ -0.24
LINC01004-201ENST00000445184 TTLL13PA6NNM8 815 aa13.54□□□□□ -0.24
LINC01004-201ENST00000445184 COLQQ9Y215 455 aaPredicted RBP13.54□□□□□ -0.24
LINC01004-201ENST00000445184 IER5LQ5T953 404 aa13.49□□□□□ -0.25
LINC01004-201ENST00000445184 SGIP1Q9BQI5 828 aa13.48□□□□□ -0.25
LINC01004-201ENST00000445184 CDAN1Q8IWY9 1227 aa13.47□□□□□ -0.25
LINC01004-201ENST00000445184 TRIM35Q9UPQ4 493 aa13.47□□□□□ -0.25
LINC01004-201ENST00000445184 PCDHB13Q9Y5F0 798 aa13.44□□□□□ -0.26
LINC01004-201ENST00000445184 PLCD3Q8N3E9 789 aa13.4□□□□□ -0.26
LINC01004-201ENST00000445184 SLAIN1Q8ND83 568 aa13.39□□□□□ -0.27
LINC01004-201ENST00000445184 ZBTB47Q9UFB7 747 aaPredicted RBP13.36□□□□□ -0.27
LINC01004-201ENST00000445184 ST18O60284 1047 aa13.35□□□□□ -0.27
LINC01004-201ENST00000445184 IFNL1Q8IU54 200 aa13.33□□□□□ -0.28
LINC01004-201ENST00000445184 NUBP1P53384 320 aa13.32□□□□□ -0.28
LINC01004-201ENST00000445184 TMEM106CQ9BVX2 250 aa13.32□□□□□ -0.28
LINC01004-201ENST00000445184 PLCG2P16885 1265 aa13.31□□□□□ -0.28
LINC01004-201ENST00000445184 FAM212AQ96EL1 285 aa13.27□□□□□ -0.29
LINC01004-201ENST00000445184 IRX5P78411 483 aaPredicted RBP13.24□□□□□ -0.29
LINC01004-201ENST00000445184 TMEM121BQ9BXQ6 578 aaPredicted RBP13.2□□□□□ -0.3
LINC01004-201ENST00000445184 OCEL1Q9H607 264 aa13.19□□□□□ -0.3
LINC01004-201ENST00000445184 SNPHO15079 494 aa13.18□□□□□ -0.3
LINC01004-201ENST00000445184 MMRN1Q13201 1228 aa13.15□□□□□ -0.3
LINC01004-201ENST00000445184 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.15□□□□□ -0.3
LINC01004-201ENST00000445184 SPNS2Q8IVW8 549 aa13.14□□□□□ -0.31
LINC01004-201ENST00000445184 DCAF8Q5TAQ9 597 aa13.1□□□□□ -0.31
LINC01004-201ENST00000445184 PYGBP11216 843 aa13.08□□□□□ -0.32
LINC01004-201ENST00000445184 MARVELD3Q96A59 401 aa13.07□□□□□ -0.32
LINC01004-201ENST00000445184 PCDHB8Q9UN66 801 aa13.04□□□□□ -0.32
LINC01004-201ENST00000445184 C3orf67Q6ZVT6 689 aa12.98□□□□□ -0.33
LINC01004-201ENST00000445184 L3MBTL3Q96JM7 780 aaPredicted RBP12.96□□□□□ -0.33
LINC01004-201ENST00000445184 EMP3P54852 163 aa12.95□□□□□ -0.34
LINC01004-201ENST00000445184 GOLGA2Q08379 1002 aa12.95□□□□□ -0.34
LINC01004-201ENST00000445184 PDCD7Q8N8D1 485 aaKnown RBP12.95□□□□□ -0.34
LINC01004-201ENST00000445184 MKRN3Q13064 507 aaKnown RBP12.93□□□□□ -0.34
LINC01004-201ENST00000445184 FKBP8Q14318 412 aa12.92□□□□□ -0.34
LINC01004-201ENST00000445184 ZNF467Q7Z7K2 595 aaPredicted RBP12.91□□□□□ -0.34
LINC01004-201ENST00000445184 GSE1Q14687 1217 aa12.87□□□□□ -0.35
LINC01004-201ENST00000445184 HS3ST6Q96QI5 342 aa12.87□□□□□ -0.35
LINC01004-201ENST00000445184 FAM205CA6NFA0 338 aa12.86□□□□□ -0.35
LINC01004-201ENST00000445184 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC01004-201ENST00000445184 FBXO3Q9UK99 471 aa12.86□□□□□ -0.35
LINC01004-201ENST00000445184 KRTAP3-3Q9BYR6 98 aa12.85□□□□□ -0.35
LINC01004-201ENST00000445184 KRTAP3-2Q9BYR7 98 aa12.85□□□□□ -0.35
LINC01004-201ENST00000445184 POTEB3A0JP26 581 aa12.83□□□□□ -0.36
LINC01004-201ENST00000445184 POTEBQ6S5H4 581 aa12.83□□□□□ -0.36
LINC01004-201ENST00000445184 CHRM1P11229 460 aaPredicted RBP12.8□□□□□ -0.36
LINC01004-201ENST00000445184 PSEN1P49768 467 aa12.79□□□□□ -0.36
LINC01004-201ENST00000445184 KLHL34Q8N239 644 aa12.79□□□□□ -0.36
LINC01004-201ENST00000445184 ILDR1Q86SU0 546 aaPredicted RBP12.74□□□□□ -0.37
LINC01004-201ENST00000445184 G3V3G9 751 aa12.73□□□□□ -0.37
LINC01004-201ENST00000445184 DPY19L2Q6NUT2 758 aa12.7□□□□□ -0.38
LINC01004-201ENST00000445184 PDAP1Q13442 181 aaKnown RBP12.69□□□□□ -0.38
LINC01004-201ENST00000445184 HOXB3P14651 431 aaPredicted RBP12.67□□□□□ -0.38
LINC01004-201ENST00000445184 VASPP50552 380 aaPredicted RBP12.67□□□□□ -0.38
LINC01004-201ENST00000445184 ZNF710Q8N1W2 664 aa12.67□□□□□ -0.38
LINC01004-201ENST00000445184 BOLA1Q9Y3E2 137 aa12.67□□□□□ -0.38
LINC01004-201ENST00000445184 HOXB1P14653 301 aaPredicted RBP12.65□□□□□ -0.38
LINC01004-201ENST00000445184 CABP2Q9NPB3 220 aa12.64□□□□□ -0.39
LINC01004-201ENST00000445184 DOK7Q18PE1 504 aa12.63□□□□□ -0.39
LINC01004-201ENST00000445184 ERBB3P21860 1342 aa12.62□□□□□ -0.39
LINC01004-201ENST00000445184 RNF166Q96A37 237 aaPredicted RBP12.57□□□□□ -0.4
LINC01004-201ENST00000445184 RIMBP2O15034 1052 aa12.56□□□□□ -0.4
LINC01004-201ENST00000445184 CIZ1Q9ULV3 898 aaPredicted RBP12.52□□□□□ -0.41
LINC01004-201ENST00000445184 VARS2Q5ST30 1063 aaKnown RBP12.51□□□□□ -0.41
LINC01004-201ENST00000445184 MYT1LQ9UL68 1186 aa12.5□□□□□ -0.41
LINC01004-201ENST00000445184 SPOCK2Q92563 424 aa12.49□□□□□ -0.41
LINC01004-201ENST00000445184 ZSWIM6Q9HCJ5 1215 aa12.46□□□□□ -0.41
LINC01004-201ENST00000445184 ZNF687Q8N1G0 1237 aa12.45□□□□□ -0.42
LINC01004-201ENST00000445184 EFCAB3Q8N7B9 438 aa12.43□□□□□ -0.42
LINC01004-201ENST00000445184 PTGER2P43116 358 aa12.4□□□□□ -0.42
LINC01004-201ENST00000445184 IFNLR1Q8IU57 520 aaPredicted RBP12.39□□□□□ -0.43
LINC01004-201ENST00000445184 MICALL2Q8IY33 904 aa12.39□□□□□ -0.43
LINC01004-201ENST00000445184 TMEM92Q6UXU6 159 aa12.38□□□□□ -0.43
LINC01004-201ENST00000445184 GPR153Q6NV75 609 aa12.37□□□□□ -0.43
LINC01004-201ENST00000445184 TRIM41Q8WV44 630 aa12.34□□□□□ -0.43
LINC01004-201ENST00000445184 SOX12O15370 315 aa12.3□□□□□ -0.44
LINC01004-201ENST00000445184 ANKRD13DQ6ZTN6 518 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms