RNA–Protein interactions for RNA: ENST00000441134.5

GARNL3-207, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-207ENST00000441134 MS4A3Q96HJ5 214 aa9.97□□□□□ -0.81
GARNL3-207ENST00000441134 RASEFQ8IZ41 740 aa9.95□□□□□ -0.82
GARNL3-207ENST00000441134 FBXO3Q9UK99 471 aa9.93□□□□□ -0.82
GARNL3-207ENST00000441134 KIF12Q96FN5 646 aa9.9□□□□□ -0.82
GARNL3-207ENST00000441134 ASTLQ6HA08 431 aaPredicted RBP9.88□□□□□ -0.83
GARNL3-207ENST00000441134 NUBP1P53384 320 aa9.87□□□□□ -0.83
GARNL3-207ENST00000441134 ATMINO43313 823 aaPredicted RBP9.86□□□□□ -0.83
GARNL3-207ENST00000441134 PELP1Q8IZL8 1130 aaKnown RBP9.86□□□□□ -0.83
GARNL3-207ENST00000441134 MAP3K13O43283 966 aa9.85□□□□□ -0.83
GARNL3-207ENST00000441134 FAM212AQ96EL1 285 aa9.84□□□□□ -0.83
GARNL3-207ENST00000441134 SLC39A7Q92504 469 aa9.82□□□□□ -0.84
GARNL3-207ENST00000441134 METRNQ9UJH8 293 aa9.81□□□□□ -0.84
GARNL3-207ENST00000441134 C7P10643 843 aa9.8□□□□□ -0.84
GARNL3-207ENST00000441134 TIE1P35590 1138 aa9.79□□□□□ -0.84
GARNL3-207ENST00000441134 VASPP50552 380 aaPredicted RBP9.79□□□□□ -0.84
GARNL3-207ENST00000441134 ATN1P54259 1190 aaPredicted RBP9.79□□□□□ -0.84
GARNL3-207ENST00000441134 SGIP1Q9BQI5 828 aa9.79□□□□□ -0.84
GARNL3-207ENST00000441134 BMP2KQ9NSY1 1161 aaPredicted RBP9.79□□□□□ -0.84
GARNL3-207ENST00000441134 TRPC6Q9Y210 931 aa9.79□□□□□ -0.84
GARNL3-207ENST00000441134 PCDHB13Q9Y5F0 798 aa9.78□□□□□ -0.84
GARNL3-207ENST00000441134 POTEB2H3BUK9 544 aa9.77□□□□□ -0.85
GARNL3-207ENST00000441134 KLHL34Q8N239 644 aa9.75□□□□□ -0.85
GARNL3-207ENST00000441134 DCAF8Q5TAQ9 597 aa9.74□□□□□ -0.85
GARNL3-207ENST00000441134 OTUD5Q96G74 571 aa9.74□□□□□ -0.85
GARNL3-207ENST00000441134 TTLL13PA6NNM8 815 aa9.72□□□□□ -0.85
GARNL3-207ENST00000441134 IFNL1Q8IU54 200 aa9.71□□□□□ -0.86
GARNL3-207ENST00000441134 PYGBP11216 843 aa9.68□□□□□ -0.86
GARNL3-207ENST00000441134 MAMSTRQ6ZN01 415 aa9.67□□□□□ -0.86
GARNL3-207ENST00000441134 TRIM35Q9UPQ4 493 aa9.67□□□□□ -0.86
GARNL3-207ENST00000441134 GSE1Q14687 1217 aa9.66□□□□□ -0.86
GARNL3-207ENST00000441134 TMEM106CQ9BVX2 250 aa9.65□□□□□ -0.86
GARNL3-207ENST00000441134 POTEFA5A3E0 1075 aa9.64□□□□□ -0.87
GARNL3-207ENST00000441134 SEC24BO95487 1268 aa9.64□□□□□ -0.87
GARNL3-207ENST00000441134 POTEJP0CG39 1038 aa9.64□□□□□ -0.87
GARNL3-207ENST00000441134 IER5LQ5T953 404 aa9.64□□□□□ -0.87
GARNL3-207ENST00000441134 SCUBE2Q9NQ36 999 aa9.63□□□□□ -0.87
GARNL3-207ENST00000441134 PCDHB8Q9UN66 801 aa9.6□□□□□ -0.87
GARNL3-207ENST00000441134 COLQQ9Y215 455 aaPredicted RBP9.6□□□□□ -0.87
GARNL3-207ENST00000441134 IFNLR1Q8IU57 520 aaPredicted RBP9.59□□□□□ -0.87
GARNL3-207ENST00000441134 SPOCK2Q92563 424 aa9.59□□□□□ -0.87
GARNL3-207ENST00000441134 ZNF467Q7Z7K2 595 aaPredicted RBP9.57□□□□□ -0.88
GARNL3-207ENST00000441134 CHRM1P11229 460 aaPredicted RBP9.55□□□□□ -0.88
GARNL3-207ENST00000441134 PLCG2P16885 1265 aa9.54□□□□□ -0.88
GARNL3-207ENST00000441134 CIZ1Q9ULV3 898 aaPredicted RBP9.53□□□□□ -0.88
GARNL3-207ENST00000441134 IRX5P78411 483 aaPredicted RBP9.51□□□□□ -0.89
GARNL3-207ENST00000441134 OCEL1Q9H607 264 aa9.48□□□□□ -0.89
GARNL3-207ENST00000441134 PSEN1P49768 467 aa9.47□□□□□ -0.89
GARNL3-207ENST00000441134 GOLGA2Q08379 1002 aa9.47□□□□□ -0.89
GARNL3-207ENST00000441134 POTEMA6NI47 508 aa9.46□□□□□ -0.9
GARNL3-207ENST00000441134 MKRN3Q13064 507 aaKnown RBP9.44□□□□□ -0.9
GARNL3-207ENST00000441134 PDAP1Q13442 181 aaKnown RBP9.44□□□□□ -0.9
GARNL3-207ENST00000441134 POTEGQ6S5H5 508 aa9.44□□□□□ -0.9
GARNL3-207ENST00000441134 FAM163AQ96GL9 167 aaPredicted RBP9.43□□□□□ -0.9
GARNL3-207ENST00000441134 SLAIN1Q8ND83 568 aa9.42□□□□□ -0.9
GARNL3-207ENST00000441134 TRIM41Q8WV44 630 aa9.42□□□□□ -0.9
GARNL3-207ENST00000441134 LCE2DQ5TA82 110 aaPredicted RBP9.39□□□□□ -0.91
GARNL3-207ENST00000441134 PDCD7Q8N8D1 485 aaKnown RBP9.38□□□□□ -0.91
GARNL3-207ENST00000441134 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.37□□□□□ -0.91
GARNL3-207ENST00000441134 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.36□□□□□ -0.91
GARNL3-207ENST00000441134 L3MBTL3Q96JM7 780 aaPredicted RBP9.35□□□□□ -0.91
GARNL3-207ENST00000441134 CABP2Q9NPB3 220 aa9.35□□□□□ -0.91
GARNL3-207ENST00000441134 PLSCR2Q9NRY7 297 aa9.35□□□□□ -0.91
GARNL3-207ENST00000441134 PCDH10Q9P2E7 1040 aa9.33□□□□□ -0.92
GARNL3-207ENST00000441134 C3orf67Q6ZVT6 689 aa9.32□□□□□ -0.92
GARNL3-207ENST00000441134 ILDR1Q86SU0 546 aaPredicted RBP9.3□□□□□ -0.92
GARNL3-207ENST00000441134 SNPHO15079 494 aa9.28□□□□□ -0.92
GARNL3-207ENST00000441134 RIOK3O14730 519 aaKnown RBP9.27□□□□□ -0.93
GARNL3-207ENST00000441134 ST18O60284 1047 aa9.27□□□□□ -0.93
GARNL3-207ENST00000441134 G3V3G9 751 aa9.26□□□□□ -0.93
GARNL3-207ENST00000441134 DPY19L2Q6NUT2 758 aa9.25□□□□□ -0.93
GARNL3-207ENST00000441134 RNF25Q96BH1 459 aaPredicted RBP9.25□□□□□ -0.93
GARNL3-207ENST00000441134 VGFO15240 615 aaPredicted RBP9.24□□□□□ -0.93
GARNL3-207ENST00000441134 EFCAB3Q8N7B9 438 aa9.24□□□□□ -0.93
GARNL3-207ENST00000441134 BOLA1Q9Y3E2 137 aa9.23□□□□□ -0.93
GARNL3-207ENST00000441134 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.21□□□□□ -0.94
GARNL3-207ENST00000441134 ZFP91Q96JP5 570 aaPredicted RBP9.21□□□□□ -0.94
GARNL3-207ENST00000441134 TMEM121BQ9BXQ6 578 aaPredicted RBP9.21□□□□□ -0.94
GARNL3-207ENST00000441134 TAOK2Q9UL54 1235 aa9.19□□□□□ -0.94
GARNL3-207ENST00000441134 CDAN1Q8IWY9 1227 aa9.18□□□□□ -0.94
GARNL3-207ENST00000441134 SOX12O15370 315 aa9.17□□□□□ -0.94
GARNL3-207ENST00000441134 ECM2O94769 699 aaPredicted RBP9.14□□□□□ -0.95
GARNL3-207ENST00000441134 MARVELD3Q96A59 401 aa9.12□□□□□ -0.95
GARNL3-207ENST00000441134 BCL11BQ9C0K0 894 aaPredicted RBP9.12□□□□□ -0.95
GARNL3-207ENST00000441134 PHF8Q9UPP1 1060 aa9.12□□□□□ -0.95
GARNL3-207ENST00000441134 NISCHQ9Y2I1 1504 aa9.11□□□□□ -0.95
GARNL3-207ENST00000441134 MICALL2Q8IY33 904 aa9.11□□□□□ -0.95
GARNL3-207ENST00000441134 EMP3P54852 163 aa9.1□□□□□ -0.95
GARNL3-207ENST00000441134 MS4A4AQ96JQ5 239 aa9.1□□□□□ -0.95
GARNL3-207ENST00000441134 STK24Q9Y6E0 443 aa9.1□□□□□ -0.95
GARNL3-207ENST00000441134 NLRP6P59044 892 aa9.08□□□□□ -0.96
GARNL3-207ENST00000441134 PKD2Q13563 968 aa9.08□□□□□ -0.96
GARNL3-207ENST00000441134 STK25O00506 426 aa9.07□□□□□ -0.96
GARNL3-207ENST00000441134 HOXB3P14651 431 aaPredicted RBP9.06□□□□□ -0.96
GARNL3-207ENST00000441134 DOK7Q18PE1 504 aa9.06□□□□□ -0.96
GARNL3-207ENST00000441134 ZNF710Q8N1W2 664 aa9.05□□□□□ -0.96
GARNL3-207ENST00000441134 RGL2O15211 777 aa9.04□□□□□ -0.96
GARNL3-207ENST00000441134 FBXO22Q8NEZ5 403 aa9.03□□□□□ -0.96
GARNL3-207ENST00000441134 FAM205CA6NFA0 338 aa9.02□□□□□ -0.97
GARNL3-207ENST00000441134 RIMBP2O15034 1052 aa9.02□□□□□ -0.97
GARNL3-207ENST00000441134 TMEM92Q6UXU6 159 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms