RNA–Protein interactions for RNA: ENST00000437999.5

CCDC93-203, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-203ENST00000437999 LHX8Q68G74 356 aa10.4□□□□□ -0.74
CCDC93-203ENST00000437999 DCBLD2Q96PD2 775 aa10.4□□□□□ -0.74
CCDC93-203ENST00000437999 POTEIP0CG38 1075 aa10.39□□□□□ -0.75
CCDC93-203ENST00000437999 MNX1P50219 401 aaPredicted RBP10.36□□□□□ -0.75
CCDC93-203ENST00000437999 BICRAQ9NZM4 1560 aa10.35□□□□□ -0.75
CCDC93-203ENST00000437999 VASPP50552 380 aaPredicted RBP10.33□□□□□ -0.76
CCDC93-203ENST00000437999 PLSCR2Q9NRY7 297 aa10.31□□□□□ -0.76
CCDC93-203ENST00000437999 SCRIBQ14160 1630 aa10.3□□□□□ -0.76
CCDC93-203ENST00000437999 GALR2O43603 387 aaPredicted RBP10.3□□□□□ -0.76
CCDC93-203ENST00000437999 PHF12Q96QT6 1004 aa10.29□□□□□ -0.76
CCDC93-203ENST00000437999 PLEKHG5O94827 1062 aa10.28□□□□□ -0.76
CCDC93-203ENST00000437999 MIER1Q8N108 512 aa10.27□□□□□ -0.77
CCDC93-203ENST00000437999 PLCD3Q8N3E9 789 aa10.23□□□□□ -0.77
CCDC93-203ENST00000437999 TSPYL2Q9H2G4 693 aaPredicted RBP10.22□□□□□ -0.77
CCDC93-203ENST00000437999 SHROOM4Q9ULL8 1493 aa10.19□□□□□ -0.78
CCDC93-203ENST00000437999 IFNLR1Q8IU57 520 aaPredicted RBP10.19□□□□□ -0.78
CCDC93-203ENST00000437999 MS4A3Q96HJ5 214 aa10.15□□□□□ -0.78
CCDC93-203ENST00000437999 ZBTB47Q9UFB7 747 aaPredicted RBP10.14□□□□□ -0.79
CCDC93-203ENST00000437999 CCDC61Q9Y6R9 512 aa10.14□□□□□ -0.79
CCDC93-203ENST00000437999 KLHL34Q8N239 644 aa10.12□□□□□ -0.79
CCDC93-203ENST00000437999 PELP1Q8IZL8 1130 aaKnown RBP10.1□□□□□ -0.79
CCDC93-203ENST00000437999 KIF12Q96FN5 646 aa10.1□□□□□ -0.79
CCDC93-203ENST00000437999 ASTLQ6HA08 431 aaPredicted RBP10.09□□□□□ -0.79
CCDC93-203ENST00000437999 ATMINO43313 823 aaPredicted RBP10.08□□□□□ -0.8
CCDC93-203ENST00000437999 RASEFQ8IZ41 740 aa10.08□□□□□ -0.8
CCDC93-203ENST00000437999 EIF4G1Q04637 1599 aaKnown RBP10.07□□□□□ -0.8
CCDC93-203ENST00000437999 SLC39A7Q92504 469 aa10.06□□□□□ -0.8
CCDC93-203ENST00000437999 SPOCK2Q92563 424 aa10.06□□□□□ -0.8
CCDC93-203ENST00000437999 CC2D2AQ9P2K1 1620 aa10.06□□□□□ -0.8
CCDC93-203ENST00000437999 POTEB2H3BUK9 544 aa10.05□□□□□ -0.8
CCDC93-203ENST00000437999 C7P10643 843 aa10.05□□□□□ -0.8
CCDC93-203ENST00000437999 MAP3K13O43283 966 aa10.04□□□□□ -0.8
CCDC93-203ENST00000437999 OTUD5Q96G74 571 aa10.02□□□□□ -0.81
CCDC93-203ENST00000437999 RTN4Q9NQC3 1192 aaKnown RBP10.02□□□□□ -0.81
CCDC93-203ENST00000437999 METRNQ9UJH8 293 aa10.02□□□□□ -0.81
CCDC93-203ENST00000437999 NUBP1P53384 320 aa10□□□□□ -0.81
CCDC93-203ENST00000437999 ATN1P54259 1190 aaPredicted RBP10□□□□□ -0.81
CCDC93-203ENST00000437999 CECR2Q9BXF3 1484 aa9.99□□□□□ -0.81
CCDC93-203ENST00000437999 AMER1Q5JTC6 1135 aaPredicted RBP9.98□□□□□ -0.81
CCDC93-203ENST00000437999 TIE1P35590 1138 aa9.97□□□□□ -0.81
CCDC93-203ENST00000437999 SGIP1Q9BQI5 828 aa9.97□□□□□ -0.81
CCDC93-203ENST00000437999 BMP2KQ9NSY1 1161 aaPredicted RBP9.97□□□□□ -0.81
CCDC93-203ENST00000437999 FAM212AQ96EL1 285 aa9.96□□□□□ -0.82
CCDC93-203ENST00000437999 TRPC6Q9Y210 931 aa9.96□□□□□ -0.82
CCDC93-203ENST00000437999 PCDHB13Q9Y5F0 798 aa9.95□□□□□ -0.82
CCDC93-203ENST00000437999 MAMSTRQ6ZN01 415 aa9.93□□□□□ -0.82
CCDC93-203ENST00000437999 DCAF8Q5TAQ9 597 aa9.91□□□□□ -0.82
CCDC93-203ENST00000437999 GSE1Q14687 1217 aa9.9□□□□□ -0.82
CCDC93-203ENST00000437999 TTLL13PA6NNM8 815 aa9.89□□□□□ -0.83
CCDC93-203ENST00000437999 POTEJP0CG39 1038 aa9.88□□□□□ -0.83
CCDC93-203ENST00000437999 SEC24BO95487 1268 aa9.87□□□□□ -0.83
CCDC93-203ENST00000437999 PKD2Q13563 968 aa9.87□□□□□ -0.83
CCDC93-203ENST00000437999 IFNL1Q8IU54 200 aa9.87□□□□□ -0.83
CCDC93-203ENST00000437999 CIZ1Q9ULV3 898 aaPredicted RBP9.87□□□□□ -0.83
CCDC93-203ENST00000437999 SCUBE2Q9NQ36 999 aa9.86□□□□□ -0.83
CCDC93-203ENST00000437999 POTEFA5A3E0 1075 aa9.85□□□□□ -0.83
CCDC93-203ENST00000437999 TRIM35Q9UPQ4 493 aa9.84□□□□□ -0.83
CCDC93-203ENST00000437999 SMARCA4P51532 1647 aa9.84□□□□□ -0.83
CCDC93-203ENST00000437999 IER5LQ5T953 404 aa9.83□□□□□ -0.84
CCDC93-203ENST00000437999 TRIM41Q8WV44 630 aa9.82□□□□□ -0.84
CCDC93-203ENST00000437999 BAZ1AQ9NRL2 1556 aaPredicted RBP9.81□□□□□ -0.84
CCDC93-203ENST00000437999 NCAPD3P42695 1498 aa9.81□□□□□ -0.84
CCDC93-203ENST00000437999 ATAD2BQ9ULI0 1458 aa9.81□□□□□ -0.84
CCDC93-203ENST00000437999 PYGBP11216 843 aa9.81□□□□□ -0.84
CCDC93-203ENST00000437999 TMEM106CQ9BVX2 250 aa9.81□□□□□ -0.84
CCDC93-203ENST00000437999 COLQQ9Y215 455 aaPredicted RBP9.81□□□□□ -0.84
CCDC93-203ENST00000437999 ECM2O94769 699 aaPredicted RBP9.78□□□□□ -0.84
CCDC93-203ENST00000437999 SMARCA2P51531 1590 aa9.78□□□□□ -0.84
CCDC93-203ENST00000437999 MROH2BQ7Z745 1585 aa9.77□□□□□ -0.85
CCDC93-203ENST00000437999 POTEMA6NI47 508 aa9.77□□□□□ -0.85
CCDC93-203ENST00000437999 CHRM1P11229 460 aaPredicted RBP9.77□□□□□ -0.85
CCDC93-203ENST00000437999 HMGXB3Q12766 1538 aa9.74□□□□□ -0.85
CCDC93-203ENST00000437999 POTEGQ6S5H5 508 aa9.74□□□□□ -0.85
CCDC93-203ENST00000437999 FAM163AQ96GL9 167 aaPredicted RBP9.74□□□□□ -0.85
CCDC93-203ENST00000437999 PCDHB8Q9UN66 801 aa9.74□□□□□ -0.85
CCDC93-203ENST00000437999 PEG3Q9GZU2 1588 aa9.73□□□□□ -0.85
CCDC93-203ENST00000437999 PLCG2P16885 1265 aa9.72□□□□□ -0.85
CCDC93-203ENST00000437999 BAZ1BQ9UIG0 1483 aaKnown RBP9.72□□□□□ -0.85
CCDC93-203ENST00000437999 RGL2O15211 777 aa9.69□□□□□ -0.86
CCDC93-203ENST00000437999 ZNF467Q7Z7K2 595 aaPredicted RBP9.69□□□□□ -0.86
CCDC93-203ENST00000437999 IRX5P78411 483 aaPredicted RBP9.68□□□□□ -0.86
CCDC93-203ENST00000437999 OCEL1Q9H607 264 aa9.68□□□□□ -0.86
CCDC93-203ENST00000437999 RNF25Q96BH1 459 aaPredicted RBP9.67□□□□□ -0.86
CCDC93-203ENST00000437999 PCDH10Q9P2E7 1040 aa9.67□□□□□ -0.86
CCDC93-203ENST00000437999 WIZO95785 1651 aa9.67□□□□□ -0.86
CCDC93-203ENST00000437999 RIOK3O14730 519 aaKnown RBP9.64□□□□□ -0.87
CCDC93-203ENST00000437999 SLAIN1Q8ND83 568 aa9.64□□□□□ -0.87
CCDC93-203ENST00000437999 GOLGA2Q08379 1002 aa9.63□□□□□ -0.87
CCDC93-203ENST00000437999 RSF1Q96T23 1441 aaPredicted RBP9.63□□□□□ -0.87
CCDC93-203ENST00000437999 LCE2DQ5TA82 110 aaPredicted RBP9.62□□□□□ -0.87
CCDC93-203ENST00000437999 NESP48681 1621 aa9.61□□□□□ -0.87
CCDC93-203ENST00000437999 MKRN3Q13064 507 aaKnown RBP9.61□□□□□ -0.87
CCDC93-203ENST00000437999 PSEN1P49768 467 aa9.6□□□□□ -0.87
CCDC93-203ENST00000437999 TAOK2Q9UL54 1235 aa9.6□□□□□ -0.87
CCDC93-203ENST00000437999 VGFO15240 615 aaPredicted RBP9.59□□□□□ -0.87
CCDC93-203ENST00000437999 ERCC6Q03468 1493 aa9.59□□□□□ -0.87
CCDC93-203ENST00000437999 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.57□□□□□ -0.88
CCDC93-203ENST00000437999 PDAP1Q13442 181 aaKnown RBP9.56□□□□□ -0.88
CCDC93-203ENST00000437999 LAMC3Q9Y6N6 1575 aa9.55□□□□□ -0.88
CCDC93-203ENST00000437999 L3MBTL3Q96JM7 780 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms