RNA–Protein interactions for RNA: ENST00000436829.1

MINDY3-204, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 5

Gene MINDY3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-204ENST00000436829 LHX8Q68G74 356 aa13.42□□□□□ -0.26
MINDY3-204ENST00000436829 TSPYL2Q9H2G4 693 aaPredicted RBP13.41□□□□□ -0.26
MINDY3-204ENST00000436829 ZBTB47Q9UFB7 747 aaPredicted RBP13.4□□□□□ -0.26
MINDY3-204ENST00000436829 SPOCK2Q92563 424 aa13.32□□□□□ -0.28
MINDY3-204ENST00000436829 AMER1Q5JTC6 1135 aaPredicted RBP13.31□□□□□ -0.28
MINDY3-204ENST00000436829 CCDC61Q9Y6R9 512 aa13.29□□□□□ -0.28
MINDY3-204ENST00000436829 MS4A3Q96HJ5 214 aa13.27□□□□□ -0.29
MINDY3-204ENST00000436829 RASEFQ8IZ41 740 aa13.25□□□□□ -0.29
MINDY3-204ENST00000436829 RTN4Q9NQC3 1192 aaKnown RBP13.25□□□□□ -0.29
MINDY3-204ENST00000436829 KIF12Q96FN5 646 aa13.22□□□□□ -0.29
MINDY3-204ENST00000436829 ASTLQ6HA08 431 aaPredicted RBP13.17□□□□□ -0.3
MINDY3-204ENST00000436829 NUBP1P53384 320 aa13.16□□□□□ -0.3
MINDY3-204ENST00000436829 FAM212AQ96EL1 285 aa13.16□□□□□ -0.3
MINDY3-204ENST00000436829 MAP3K13O43283 966 aa13.15□□□□□ -0.3
MINDY3-204ENST00000436829 ATMINO43313 823 aaPredicted RBP13.15□□□□□ -0.3
MINDY3-204ENST00000436829 SLC39A7Q92504 469 aa13.13□□□□□ -0.31
MINDY3-204ENST00000436829 CIZ1Q9ULV3 898 aaPredicted RBP13.12□□□□□ -0.31
MINDY3-204ENST00000436829 C7P10643 843 aa13.11□□□□□ -0.31
MINDY3-204ENST00000436829 PELP1Q8IZL8 1130 aaKnown RBP13.11□□□□□ -0.31
MINDY3-204ENST00000436829 SGIP1Q9BQI5 828 aa13.11□□□□□ -0.31
MINDY3-204ENST00000436829 DCAF8Q5TAQ9 597 aa13.1□□□□□ -0.31
MINDY3-204ENST00000436829 METRNQ9UJH8 293 aa13.08□□□□□ -0.32
MINDY3-204ENST00000436829 TIE1P35590 1138 aa13.07□□□□□ -0.32
MINDY3-204ENST00000436829 GSE1Q14687 1217 aa13.07□□□□□ -0.32
MINDY3-204ENST00000436829 PCDHB13Q9Y5F0 798 aa13.07□□□□□ -0.32
MINDY3-204ENST00000436829 ATN1P54259 1190 aaPredicted RBP13.05□□□□□ -0.32
MINDY3-204ENST00000436829 PKD2Q13563 968 aa13.04□□□□□ -0.32
MINDY3-204ENST00000436829 BMP2KQ9NSY1 1161 aaPredicted RBP13.03□□□□□ -0.32
MINDY3-204ENST00000436829 POTEB2H3BUK9 544 aa13□□□□□ -0.33
MINDY3-204ENST00000436829 ECM2O94769 699 aaPredicted RBP13□□□□□ -0.33
MINDY3-204ENST00000436829 TRPC6Q9Y210 931 aa13□□□□□ -0.33
MINDY3-204ENST00000436829 TTLL13PA6NNM8 815 aa12.96□□□□□ -0.33
MINDY3-204ENST00000436829 TRIM41Q8WV44 630 aa12.96□□□□□ -0.33
MINDY3-204ENST00000436829 OTUD5Q96G74 571 aa12.96□□□□□ -0.33
MINDY3-204ENST00000436829 MAMSTRQ6ZN01 415 aa12.95□□□□□ -0.34
MINDY3-204ENST00000436829 IFNL1Q8IU54 200 aa12.95□□□□□ -0.34
MINDY3-204ENST00000436829 PYGBP11216 843 aa12.92□□□□□ -0.34
MINDY3-204ENST00000436829 SEC24BO95487 1268 aa12.91□□□□□ -0.34
MINDY3-204ENST00000436829 TRIM35Q9UPQ4 493 aa12.9□□□□□ -0.34
MINDY3-204ENST00000436829 IER5LQ5T953 404 aa12.88□□□□□ -0.35
MINDY3-204ENST00000436829 TMEM106CQ9BVX2 250 aa12.88□□□□□ -0.35
MINDY3-204ENST00000436829 SCUBE2Q9NQ36 999 aa12.87□□□□□ -0.35
MINDY3-204ENST00000436829 DCAF8L2P0C7V8 631 aa12.85□□□□□ -0.35
MINDY3-204ENST00000436829 CHRM1P11229 460 aaPredicted RBP12.85□□□□□ -0.35
MINDY3-204ENST00000436829 RGL2O15211 777 aa12.83□□□□□ -0.36
MINDY3-204ENST00000436829 POTEFA5A3E0 1075 aa12.81□□□□□ -0.36
MINDY3-204ENST00000436829 ZNF467Q7Z7K2 595 aaPredicted RBP12.81□□□□□ -0.36
MINDY3-204ENST00000436829 POTEJP0CG39 1038 aa12.8□□□□□ -0.36
MINDY3-204ENST00000436829 PCDHB8Q9UN66 801 aa12.79□□□□□ -0.36
MINDY3-204ENST00000436829 COLQQ9Y215 455 aaPredicted RBP12.78□□□□□ -0.36
MINDY3-204ENST00000436829 PLCG2P16885 1265 aa12.76□□□□□ -0.37
MINDY3-204ENST00000436829 RNF25Q96BH1 459 aaPredicted RBP12.75□□□□□ -0.37
MINDY3-204ENST00000436829 RIOK3O14730 519 aaKnown RBP12.74□□□□□ -0.37
MINDY3-204ENST00000436829 TAOK2Q9UL54 1235 aa12.72□□□□□ -0.37
MINDY3-204ENST00000436829 GOLGA2Q08379 1002 aa12.71□□□□□ -0.37
MINDY3-204ENST00000436829 OCEL1Q9H607 264 aa12.68□□□□□ -0.38
MINDY3-204ENST00000436829 VGFO15240 615 aaPredicted RBP12.67□□□□□ -0.38
MINDY3-204ENST00000436829 IRX5P78411 483 aaPredicted RBP12.67□□□□□ -0.38
MINDY3-204ENST00000436829 MKRN3Q13064 507 aaKnown RBP12.65□□□□□ -0.38
MINDY3-204ENST00000436829 PSEN1P49768 467 aa12.64□□□□□ -0.39
MINDY3-204ENST00000436829 CHGAP10645 457 aaKnown RBP12.63□□□□□ -0.39
MINDY3-204ENST00000436829 POTEMA6NI47 508 aa12.62□□□□□ -0.39
MINDY3-204ENST00000436829 PDAP1Q13442 181 aaKnown RBP12.62□□□□□ -0.39
MINDY3-204ENST00000436829 FAM163AQ96GL9 167 aaPredicted RBP12.61□□□□□ -0.39
MINDY3-204ENST00000436829 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.59□□□□□ -0.39
MINDY3-204ENST00000436829 POTEGQ6S5H5 508 aa12.59□□□□□ -0.39
MINDY3-204ENST00000436829 ZFP91Q96JP5 570 aaPredicted RBP12.59□□□□□ -0.39
MINDY3-204ENST00000436829 SLAIN1Q8ND83 568 aa12.58□□□□□ -0.4
MINDY3-204ENST00000436829 STK25O00506 426 aa12.57□□□□□ -0.4
MINDY3-204ENST00000436829 HS6ST3Q8IZP7 471 aa12.55□□□□□ -0.4
MINDY3-204ENST00000436829 BCL11BQ9C0K0 894 aaPredicted RBP12.53□□□□□ -0.4
MINDY3-204ENST00000436829 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.53□□□□□ -0.4
MINDY3-204ENST00000436829 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.53□□□□□ -0.4
MINDY3-204ENST00000436829 STK24Q9Y6E0 443 aa12.53□□□□□ -0.4
MINDY3-204ENST00000436829 L3MBTL3Q96JM7 780 aaPredicted RBP12.52□□□□□ -0.41
MINDY3-204ENST00000436829 BBXQ8WY36 941 aaPredicted RBP12.51□□□□□ -0.41
MINDY3-204ENST00000436829 PCDH10Q9P2E7 1040 aa12.51□□□□□ -0.41
MINDY3-204ENST00000436829 CABP2Q9NPB3 220 aa12.49□□□□□ -0.41
MINDY3-204ENST00000436829 PDCD7Q8N8D1 485 aaKnown RBP12.48□□□□□ -0.41
MINDY3-204ENST00000436829 C3orf67Q6ZVT6 689 aa12.47□□□□□ -0.41
MINDY3-204ENST00000436829 PLSCR2Q9NRY7 297 aa12.47□□□□□ -0.41
MINDY3-204ENST00000436829 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.47□□□□□ -0.41
MINDY3-204ENST00000436829 SNPHO15079 494 aa12.44□□□□□ -0.42
MINDY3-204ENST00000436829 LCE2DQ5TA82 110 aaPredicted RBP12.44□□□□□ -0.42
MINDY3-204ENST00000436829 G3V3G9 751 aa12.43□□□□□ -0.42
MINDY3-204ENST00000436829 DNAJC5Q9H3Z4 198 aa12.42□□□□□ -0.42
MINDY3-204ENST00000436829 ILDR1Q86SU0 546 aaPredicted RBP12.39□□□□□ -0.43
MINDY3-204ENST00000436829 ST18O60284 1047 aa12.36□□□□□ -0.43
MINDY3-204ENST00000436829 NKX1-1Q15270 411 aaPredicted RBP12.36□□□□□ -0.43
MINDY3-204ENST00000436829 PAXIP1Q6ZW49 1069 aaPredicted RBP12.36□□□□□ -0.43
MINDY3-204ENST00000436829 EFCAB3Q8N7B9 438 aa12.36□□□□□ -0.43
MINDY3-204ENST00000436829 SPRYD3Q8NCJ5 442 aa12.35□□□□□ -0.43
MINDY3-204ENST00000436829 CFAP44Q96MT7 982 aa12.35□□□□□ -0.43
MINDY3-204ENST00000436829 PLCB2Q00722 1185 aa12.34□□□□□ -0.43
MINDY3-204ENST00000436829 BOLA1Q9Y3E2 137 aa12.33□□□□□ -0.44
MINDY3-204ENST00000436829 DPY19L2Q6NUT2 758 aa12.32□□□□□ -0.44
MINDY3-204ENST00000436829 TMEM121BQ9BXQ6 578 aaPredicted RBP12.32□□□□□ -0.44
MINDY3-204ENST00000436829 SOX12O15370 315 aa12.31□□□□□ -0.44
MINDY3-204ENST00000436829 RYDENQ9NUL5 291 aaKnown RBP12.3□□□□□ -0.44
MINDY3-204ENST00000436829 GTPBP6O43824 516 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms