RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 CCDC61Q9Y6R9 512 aa13.13□□□□□ -0.31
LINC00353-201ENST00000435401 RASEFQ8IZ41 740 aa13.11□□□□□ -0.31
LINC00353-201ENST00000435401 MS4A3Q96HJ5 214 aa13.08□□□□□ -0.32
LINC00353-201ENST00000435401 KIF12Q96FN5 646 aa13.06□□□□□ -0.32
LINC00353-201ENST00000435401 NUBP1P53384 320 aa13.05□□□□□ -0.32
LINC00353-201ENST00000435401 MAP3K13O43283 966 aa12.98□□□□□ -0.33
LINC00353-201ENST00000435401 ASTLQ6HA08 431 aaPredicted RBP12.98□□□□□ -0.33
LINC00353-201ENST00000435401 FAM212AQ96EL1 285 aa12.98□□□□□ -0.33
LINC00353-201ENST00000435401 VASPP50552 380 aaPredicted RBP12.97□□□□□ -0.33
LINC00353-201ENST00000435401 ATMINO43313 823 aaPredicted RBP12.96□□□□□ -0.33
LINC00353-201ENST00000435401 PELP1Q8IZL8 1130 aaKnown RBP12.95□□□□□ -0.34
LINC00353-201ENST00000435401 SGIP1Q9BQI5 828 aa12.93□□□□□ -0.34
LINC00353-201ENST00000435401 KLHL34Q8N239 644 aa12.91□□□□□ -0.34
LINC00353-201ENST00000435401 DCAF8Q5TAQ9 597 aa12.9□□□□□ -0.34
LINC00353-201ENST00000435401 C7P10643 843 aa12.89□□□□□ -0.35
LINC00353-201ENST00000435401 SLC39A7Q92504 469 aa12.89□□□□□ -0.35
LINC00353-201ENST00000435401 TIE1P35590 1138 aa12.88□□□□□ -0.35
LINC00353-201ENST00000435401 PCDHB13Q9Y5F0 798 aa12.88□□□□□ -0.35
LINC00353-201ENST00000435401 ATN1P54259 1190 aaPredicted RBP12.87□□□□□ -0.35
LINC00353-201ENST00000435401 BMP2KQ9NSY1 1161 aaPredicted RBP12.86□□□□□ -0.35
LINC00353-201ENST00000435401 TRPC6Q9Y210 931 aa12.86□□□□□ -0.35
LINC00353-201ENST00000435401 METRNQ9UJH8 293 aa12.85□□□□□ -0.35
LINC00353-201ENST00000435401 POTEB2H3BUK9 544 aa12.82□□□□□ -0.36
LINC00353-201ENST00000435401 IFNL1Q8IU54 200 aa12.8□□□□□ -0.36
LINC00353-201ENST00000435401 TTLL13PA6NNM8 815 aa12.79□□□□□ -0.36
LINC00353-201ENST00000435401 GSE1Q14687 1217 aa12.79□□□□□ -0.36
LINC00353-201ENST00000435401 PYGBP11216 843 aa12.77□□□□□ -0.37
LINC00353-201ENST00000435401 OTUD5Q96G74 571 aa12.75□□□□□ -0.37
LINC00353-201ENST00000435401 IFNLR1Q8IU57 520 aaPredicted RBP12.74□□□□□ -0.37
LINC00353-201ENST00000435401 SPOCK2Q92563 424 aa12.72□□□□□ -0.37
LINC00353-201ENST00000435401 TRIM35Q9UPQ4 493 aa12.71□□□□□ -0.37
LINC00353-201ENST00000435401 TMEM106CQ9BVX2 250 aa12.7□□□□□ -0.38
LINC00353-201ENST00000435401 MAMSTRQ6ZN01 415 aa12.69□□□□□ -0.38
LINC00353-201ENST00000435401 CHRM1P11229 460 aaPredicted RBP12.68□□□□□ -0.38
LINC00353-201ENST00000435401 IER5LQ5T953 404 aa12.68□□□□□ -0.38
LINC00353-201ENST00000435401 POTEFA5A3E0 1075 aa12.67□□□□□ -0.38
LINC00353-201ENST00000435401 SEC24BO95487 1268 aa12.66□□□□□ -0.38
LINC00353-201ENST00000435401 PCDHB8Q9UN66 801 aa12.66□□□□□ -0.38
LINC00353-201ENST00000435401 POTEJP0CG39 1038 aa12.65□□□□□ -0.38
LINC00353-201ENST00000435401 ZNF467Q7Z7K2 595 aaPredicted RBP12.64□□□□□ -0.39
LINC00353-201ENST00000435401 COLQQ9Y215 455 aaPredicted RBP12.62□□□□□ -0.39
LINC00353-201ENST00000435401 CIZ1Q9ULV3 898 aaPredicted RBP12.61□□□□□ -0.39
LINC00353-201ENST00000435401 SCUBE2Q9NQ36 999 aa12.6□□□□□ -0.39
LINC00353-201ENST00000435401 PLCG2P16885 1265 aa12.54□□□□□ -0.4
LINC00353-201ENST00000435401 IRX5P78411 483 aaPredicted RBP12.52□□□□□ -0.41
LINC00353-201ENST00000435401 PSEN1P49768 467 aa12.5□□□□□ -0.41
LINC00353-201ENST00000435401 TRIM41Q8WV44 630 aa12.49□□□□□ -0.41
LINC00353-201ENST00000435401 OCEL1Q9H607 264 aa12.49□□□□□ -0.41
LINC00353-201ENST00000435401 PDAP1Q13442 181 aaKnown RBP12.47□□□□□ -0.41
LINC00353-201ENST00000435401 GOLGA2Q08379 1002 aa12.46□□□□□ -0.41
LINC00353-201ENST00000435401 MKRN3Q13064 507 aaKnown RBP12.45□□□□□ -0.42
LINC00353-201ENST00000435401 FAM163AQ96GL9 167 aaPredicted RBP12.37□□□□□ -0.43
LINC00353-201ENST00000435401 SLAIN1Q8ND83 568 aa12.36□□□□□ -0.43
LINC00353-201ENST00000435401 PDCD7Q8N8D1 485 aaKnown RBP12.35□□□□□ -0.43
LINC00353-201ENST00000435401 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.35□□□□□ -0.43
LINC00353-201ENST00000435401 POTEMA6NI47 508 aa12.33□□□□□ -0.44
LINC00353-201ENST00000435401 CABP2Q9NPB3 220 aa12.33□□□□□ -0.44
LINC00353-201ENST00000435401 POTEGQ6S5H5 508 aa12.32□□□□□ -0.44
LINC00353-201ENST00000435401 L3MBTL3Q96JM7 780 aaPredicted RBP12.32□□□□□ -0.44
LINC00353-201ENST00000435401 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.31□□□□□ -0.44
LINC00353-201ENST00000435401 ILDR1Q86SU0 546 aaPredicted RBP12.29□□□□□ -0.44
LINC00353-201ENST00000435401 RIOK3O14730 519 aaKnown RBP12.28□□□□□ -0.44
LINC00353-201ENST00000435401 LCE2DQ5TA82 110 aaPredicted RBP12.27□□□□□ -0.45
LINC00353-201ENST00000435401 VGFO15240 615 aaPredicted RBP12.23□□□□□ -0.45
LINC00353-201ENST00000435401 RNF25Q96BH1 459 aaPredicted RBP12.23□□□□□ -0.45
LINC00353-201ENST00000435401 C3orf67Q6ZVT6 689 aa12.22□□□□□ -0.45
LINC00353-201ENST00000435401 EFCAB3Q8N7B9 438 aa12.21□□□□□ -0.45
LINC00353-201ENST00000435401 PCDH10Q9P2E7 1040 aa12.21□□□□□ -0.45
LINC00353-201ENST00000435401 DPY19L2Q6NUT2 758 aa12.2□□□□□ -0.46
LINC00353-201ENST00000435401 SNPHO15079 494 aa12.19□□□□□ -0.46
LINC00353-201ENST00000435401 TAOK2Q9UL54 1235 aa12.19□□□□□ -0.46
LINC00353-201ENST00000435401 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.18□□□□□ -0.46
LINC00353-201ENST00000435401 G3V3G9 751 aa12.18□□□□□ -0.46
LINC00353-201ENST00000435401 ZFP91Q96JP5 570 aaPredicted RBP12.18□□□□□ -0.46
LINC00353-201ENST00000435401 BOLA1Q9Y3E2 137 aa12.17□□□□□ -0.46
LINC00353-201ENST00000435401 SOX12O15370 315 aa12.15□□□□□ -0.46
LINC00353-201ENST00000435401 ST18O60284 1047 aa12.15□□□□□ -0.46
LINC00353-201ENST00000435401 ECM2O94769 699 aaPredicted RBP12.14□□□□□ -0.47
LINC00353-201ENST00000435401 PLSCR2Q9NRY7 297 aa12.12□□□□□ -0.47
LINC00353-201ENST00000435401 PKD2Q13563 968 aa12.08□□□□□ -0.48
LINC00353-201ENST00000435401 TMEM121BQ9BXQ6 578 aaPredicted RBP12.08□□□□□ -0.48
LINC00353-201ENST00000435401 BCL11BQ9C0K0 894 aaPredicted RBP12.06□□□□□ -0.48
LINC00353-201ENST00000435401 PHF8Q9UPP1 1060 aa12.04□□□□□ -0.48
LINC00353-201ENST00000435401 STK24Q9Y6E0 443 aa12.04□□□□□ -0.48
LINC00353-201ENST00000435401 STK25O00506 426 aa12.01□□□□□ -0.49
LINC00353-201ENST00000435401 RGL2O15211 777 aa12.01□□□□□ -0.49
LINC00353-201ENST00000435401 NLRP6P59044 892 aa12.01□□□□□ -0.49
LINC00353-201ENST00000435401 CDAN1Q8IWY9 1227 aa12.01□□□□□ -0.49
LINC00353-201ENST00000435401 MS4A4AQ96JQ5 239 aa12.01□□□□□ -0.49
LINC00353-201ENST00000435401 MICALL2Q8IY33 904 aa11.99□□□□□ -0.49
LINC00353-201ENST00000435401 FBXO22Q8NEZ5 403 aa11.95□□□□□ -0.5
LINC00353-201ENST00000435401 MARVELD3Q96A59 401 aa11.95□□□□□ -0.5
LINC00353-201ENST00000435401 MFRPQ9BY79 579 aa11.92□□□□□ -0.5
LINC00353-201ENST00000435401 HOXB3P14651 431 aaPredicted RBP11.91□□□□□ -0.5
LINC00353-201ENST00000435401 EMP3P54852 163 aa11.9□□□□□ -0.5
LINC00353-201ENST00000435401 DOK7Q18PE1 504 aa11.9□□□□□ -0.5
LINC00353-201ENST00000435401 ZNF710Q8N1W2 664 aa11.9□□□□□ -0.5
LINC00353-201ENST00000435401 TMEM92Q6UXU6 159 aa11.89□□□□□ -0.51
LINC00353-201ENST00000435401 RIMBP2O15034 1052 aa11.85□□□□□ -0.51
LINC00353-201ENST00000435401 HOXB1P14653 301 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms