RNA–Protein interactions for RNA: ENST00000433129.5

ABCA7-202, Transcript of ATP binding cassette subfamily A member 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ABCA7, Length 6,704 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-202ENST00000433129 MRS2Q9HD23 443 aa18.9■□□□□ 0.62
ABCA7-202ENST00000433129 GLIPR1L2Q4G1C9 344 aa18.9■□□□□ 0.62
ABCA7-202ENST00000433129 WDR43Q15061 677 aaKnown RBP eCLIP18.88■□□□□ 0.616e-6■■■□□ 15.9
ABCA7-202ENST00000433129 MIER1Q8N108 512 aa18.87■□□□□ 0.61
ABCA7-202ENST00000433129 HIRIP3Q9BW71 556 aaPredicted RBP18.86■□□□□ 0.61
ABCA7-202ENST00000433129 RB1CC1Q8TDY2 1594 aa18.86■□□□□ 0.61
ABCA7-202ENST00000433129 KDM2AQ9Y2K7 1162 aa18.85■□□□□ 0.61
ABCA7-202ENST00000433129 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
ABCA7-202ENST00000433129 TULP1O00294 542 aaPredicted RBP18.78■□□□□ 0.6
ABCA7-202ENST00000433129 CDK11BP21127 795 aaKnown RBP18.78■□□□□ 0.6
ABCA7-202ENST00000433129 MTUS2Q5JR59 1369 aa18.74■□□□□ 0.59
ABCA7-202ENST00000433129 PLEKHD1A6NEE1 506 aa18.74■□□□□ 0.59
ABCA7-202ENST00000433129 LMOD2Q6P5Q4 547 aa18.71■□□□□ 0.59
ABCA7-202ENST00000433129 MYH16Q9H6N6 1097 aa18.69■□□□□ 0.58
ABCA7-202ENST00000433129 EIF4G2P78344 907 aaKnown RBP eCLIP18.67■□□□□ 0.58
ABCA7-202ENST00000433129 SENP3-EIF4A1A0A087X0R7 540 aa18.66■□□□□ 0.58
ABCA7-202ENST00000433129 MLECQ14165 292 aa18.64■□□□□ 0.57
ABCA7-202ENST00000433129 BECN1Q14457 450 aa18.62■□□□□ 0.57
ABCA7-202ENST00000433129 DDRGK1Q96HY6 314 aa18.62■□□□□ 0.57
ABCA7-202ENST00000433129 RRP7BPQ9NSQ0 103 aa18.62■□□□□ 0.57
ABCA7-202ENST00000433129 NPHP1O15259 732 aa18.6■□□□□ 0.57
ABCA7-202ENST00000433129 TRIM44Q96DX7 344 aaPredicted RBP18.6■□□□□ 0.57
ABCA7-202ENST00000433129 CCDC180Q9P1Z9 1646 aa18.58■□□□□ 0.57
ABCA7-202ENST00000433129 NCBP3Q53F19 620 aaKnown RBP18.58■□□□□ 0.56
ABCA7-202ENST00000433129 RGL3Q3MIN7 710 aa18.56■□□□□ 0.56
ABCA7-202ENST00000433129 BAZ1BQ9UIG0 1483 aaKnown RBP18.56■□□□□ 0.56
ABCA7-202ENST00000433129 NCLP19338 710 aaKnown RBP18.56■□□□□ 0.56
ABCA7-202ENST00000433129 SUPT16HQ9Y5B9 1047 aaKnown RBP18.54■□□□□ 0.56
ABCA7-202ENST00000433129 CLIP1P30622 1438 aa18.53■□□□□ 0.56
ABCA7-202ENST00000433129 PPM1GO15355 546 aaPredicted RBP18.52■□□□□ 0.56
ABCA7-202ENST00000433129 GOLGA6L22H0YM25 854 aa18.52■□□□□ 0.56
ABCA7-202ENST00000433129 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.56
ABCA7-202ENST00000433129 ANP32EQ9BTT0 268 aa18.49■□□□□ 0.55
ABCA7-202ENST00000433129 CFDP1Q9UEE9 299 aaPredicted RBP18.48■□□□□ 0.55
ABCA7-202ENST00000433129 TPRNQ4KMQ1 711 aa18.47■□□□□ 0.55
ABCA7-202ENST00000433129 POGKQ9P215 609 aa18.46■□□□□ 0.55
ABCA7-202ENST00000433129 PTMAP06454 111 aaKnown RBP18.45■□□□□ 0.54
ABCA7-202ENST00000433129 RSF1Q96T23 1441 aaPredicted RBP18.44■□□□□ 0.54
ABCA7-202ENST00000433129 LAS1LQ9Y4W2 734 aaKnown RBP18.43■□□□□ 0.54
ABCA7-202ENST00000433129 EIF4G1Q04637 1599 aaKnown RBP18.41■□□□□ 0.54
ABCA7-202ENST00000433129 FTSJ3Q8IY81 847 aaKnown RBP18.41■□□□□ 0.54
ABCA7-202ENST00000433129 CFAP53Q96M91 514 aa18.41■□□□□ 0.54
ABCA7-202ENST00000433129 TAOK2Q9UL54 1235 aa18.41■□□□□ 0.54
ABCA7-202ENST00000433129 KNSTRNQ9Y448 316 aa18.41■□□□□ 0.54
ABCA7-202ENST00000433129 NEUROD2Q15784 382 aa18.41■□□□□ 0.54
ABCA7-202ENST00000433129 DNTTIP2Q5QJE6 756 aaKnown RBP18.39■□□□□ 0.54
ABCA7-202ENST00000433129 RTN4Q9NQC3 1192 aaKnown RBP18.39■□□□□ 0.53
ABCA7-202ENST00000433129 AEBP2Q6ZN18 517 aaPredicted RBP18.38■□□□□ 0.53
ABCA7-202ENST00000433129 NACADO15069 1562 aa18.38■□□□□ 0.53
ABCA7-202ENST00000433129 RGS3P49796 1198 aa18.38■□□□□ 0.53
ABCA7-202ENST00000433129 ZRSR1Q15695 479 aaKnown RBP18.37■□□□□ 0.53
ABCA7-202ENST00000433129 CASC1Q6TDU7 716 aa18.37■□□□□ 0.53
ABCA7-202ENST00000433129 CARD11Q9BXL7 1154 aa18.36■□□□□ 0.53
ABCA7-202ENST00000433129 CEP162Q5TB80 1403 aa18.35■□□□□ 0.53
ABCA7-202ENST00000433129 PPP4R2Q9NY27 417 aa18.34■□□□□ 0.53
ABCA7-202ENST00000433129 MYO15BQ96JP2 1530 aa18.34■□□□□ 0.53
ABCA7-202ENST00000433129 ERICH6BQ5W0A0 696 aa18.34■□□□□ 0.53
ABCA7-202ENST00000433129 TNNT2P45379 298 aaPredicted RBP18.34■□□□□ 0.53
ABCA7-202ENST00000433129 CDCA8Q53HL2 280 aa18.33■□□□□ 0.52
ABCA7-202ENST00000433129 NAP1L5Q96NT1 182 aaPredicted RBP18.33■□□□□ 0.52
ABCA7-202ENST00000433129 HDGFP51858 240 aaKnown RBP18.32■□□□□ 0.52
ABCA7-202ENST00000433129 FRAT1Q92837 279 aaPredicted RBP18.32■□□□□ 0.52
ABCA7-202ENST00000433129 NOP58Q9Y2X3 529 aaKnown RBP18.31■□□□□ 0.52
ABCA7-202ENST00000433129 SIN3AQ96ST3 1273 aa18.3■□□□□ 0.52
ABCA7-202ENST00000433129 SOX12O15370 315 aa18.3■□□□□ 0.52
ABCA7-202ENST00000433129 GOLGA3Q08378 1498 aa18.29■□□□□ 0.52
ABCA7-202ENST00000433129 PLCB2Q00722 1185 aa18.29■□□□□ 0.52
ABCA7-202ENST00000433129 B4GALNT3Q6L9W6 998 aa18.28■□□□□ 0.52
ABCA7-202ENST00000433129 MAPK8IP3Q9UPT6 1336 aa18.28■□□□□ 0.52
ABCA7-202ENST00000433129 KIF27Q86VH2 1401 aa18.28■□□□□ 0.52
ABCA7-202ENST00000433129 CCDC9Q9Y3X0 531 aaKnown RBP18.26■□□□□ 0.51
ABCA7-202ENST00000433129 KANK1Q14678 1352 aa18.26■□□□□ 0.51
ABCA7-202ENST00000433129 CC2D1BQ5T0F9 858 aaKnown RBP18.25■□□□□ 0.51
ABCA7-202ENST00000433129 GGT6Q6P531 493 aa18.25■□□□□ 0.51
ABCA7-202ENST00000433129 HSP90AB1P08238 724 aaKnown RBP18.23■□□□□ 0.51
ABCA7-202ENST00000433129 WRNQ14191 1432 aaPredicted RBP eCLIP18.22■□□□□ 0.51
ABCA7-202ENST00000433129 NUDCQ9Y266 331 aa18.22■□□□□ 0.51
ABCA7-202ENST00000433129 CLSTN1O94985 981 aa18.2■□□□□ 0.5
ABCA7-202ENST00000433129 SAFB2Q14151 953 aaKnown RBP eCLIP18.19■□□□□ 0.5
ABCA7-202ENST00000433129 EEA1Q15075 1411 aa18.18■□□□□ 0.5
ABCA7-202ENST00000433129 CCNB3Q8WWL7 1395 aa18.18■□□□□ 0.5
ABCA7-202ENST00000433129 PAK3O75914 559 aaPredicted RBP18.18■□□□□ 0.5
ABCA7-202ENST00000433129 U2SURPO15042 1029 aaKnown RBP18.18■□□□□ 0.5
ABCA7-202ENST00000433129 GOLGA2Q08379 1002 aa18.17■□□□□ 0.5
ABCA7-202ENST00000433129 OS9Q13438 667 aaPredicted RBP18.15■□□□□ 0.5
ABCA7-202ENST00000433129 FGD1P98174 961 aa18.15■□□□□ 0.5
ABCA7-202ENST00000433129 SRPK2P78362 688 aaKnown RBP18.14■□□□□ 0.5
ABCA7-202ENST00000433129 STK26Q9P289 416 aa18.14■□□□□ 0.49
ABCA7-202ENST00000433129 CSB-PGBD3P0DP91 1061 aa18.13■□□□□ 0.49
ABCA7-202ENST00000433129 KCNJ4P48050 445 aa18.13■□□□□ 0.49
ABCA7-202ENST00000433129 NAP1L2Q9ULW6 460 aaPredicted RBP18.12■□□□□ 0.49
ABCA7-202ENST00000433129 SPRYD3Q8NCJ5 442 aa18.12■□□□□ 0.49
ABCA7-202ENST00000433129 CHMP4BQ9H444 224 aaKnown RBP18.12■□□□□ 0.49
ABCA7-202ENST00000433129 MS4A1P11836 297 aa18.11■□□□□ 0.49
ABCA7-202ENST00000433129 TNIKQ9UKE5 1360 aa18.1■□□□□ 0.49
ABCA7-202ENST00000433129 HSCBQ8IWL3 235 aa18.1■□□□□ 0.49
ABCA7-202ENST00000433129 GOLGA6L6A8MZA4 724 aa18.09■□□□□ 0.49
ABCA7-202ENST00000433129 PDS5BQ9NTI5 1447 aa18.09■□□□□ 0.49
ABCA7-202ENST00000433129 DEKP35659 375 aaKnown RBP18.08■□□□□ 0.49
ABCA7-202ENST00000433129 CUX2O14529 1486 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms