RNA–Protein interactions for RNA: ENST00000433129.5

ABCA7-202, Transcript of ATP binding cassette subfamily A member 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ABCA7, Length 6,704 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-202ENST00000433129 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.04■□□□□ 0.322e-7■■■■■ 130.4
ABCA7-202ENST00000433129 SF3B1O75533 1304 aaKnown RBP eCLIP14.27□□□□□ -0.133e-6■■■■■ 115.2
ABCA7-202ENST00000433129 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.13□□□□□ -0.153e-7■■■■■ 92.8
ABCA7-202ENST00000433129 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.38□□□□□ -0.275e-7■■■■■ 47.8
ABCA7-202ENST00000433129 PPIGQ13427 754 aaKnown RBP eCLIP14.24□□□□□ -0.138e-8■■■■■ 45.1
ABCA7-202ENST00000433129 GTF2F1P35269 517 aaKnown RBP eCLIP16.3■□□□□ 0.28e-10■■■■■ 41.7
ABCA7-202ENST00000433129 SF3A3Q12874 501 aaKnown RBP eCLIP15.72■□□□□ 0.111e-6■■■■■ 40.2
ABCA7-202ENST00000433129 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.78■□□□□ 0.121e-10■■■■■ 39.3
ABCA7-202ENST00000433129 PCBP2Q15366 365 aaKnown RBP eCLIP13.8□□□□□ -0.21e-6■■■■■ 39.2
ABCA7-202ENST00000433129 SF3B4Q15427 424 aaKnown RBP eCLIP13.31□□□□□ -0.286e-7■■■■■ 36.5
ABCA7-202ENST00000433129 DDX3XO00571 662 aaKnown RBP eCLIP14.41□□□□□ -0.11e-6■■■■■ 34.7
ABCA7-202ENST00000433129 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.7■□□□□ 0.265e-8■■■■■ 33.8
ABCA7-202ENST00000433129 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.11■□□□□ 0.171e-6■■■■■ 31.6
ABCA7-202ENST00000433129 AQRO60306 1485 aaKnown RBP eCLIP17.22■□□□□ 0.354e-7■■■■■ 31.2
ABCA7-202ENST00000433129 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.73□□□□□ -0.052e-6■■■■■ 30.8
ABCA7-202ENST00000433129 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.03■□□□□ -02e-7■■■■■ 30.5
ABCA7-202ENST00000433129 EFTUD2Q15029 972 aaKnown RBP eCLIP14.99□□□□□ -0.016e-7■■■■□ 23.3
ABCA7-202ENST00000433129 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.08□□□□□ -0.151e-6■■■■□ 23
ABCA7-202ENST00000433129 RBM22Q9NW64 420 aaKnown RBP eCLIP14.46□□□□□ -0.091e-5■■■■□ 22.7
ABCA7-202ENST00000433129 LSM11P83369 360 aaKnown RBP eCLIP12.46□□□□□ -0.414e-7■■■■□ 22.2
ABCA7-202ENST00000433129 ZRANB2O95218 330 aaKnown RBP eCLIP15.1■□□□□ 0.011e-6■■■■□ 21.9
ABCA7-202ENST00000433129 RBM5P52756 815 aaKnown RBP eCLIP16.91■□□□□ 0.33e-6■■■■□ 21.7
ABCA7-202ENST00000433129 PRPF4O43172 522 aaKnown RBP eCLIP14.84□□□□□ -0.032e-6■■■■□ 21.7
ABCA7-202ENST00000433129 PABPN1Q86U42 306 aaKnown RBP eCLIP20.54■□□□□ 0.885e-7■■■■□ 21.4
ABCA7-202ENST00000433129 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.01□□□□□ -0.172e-8■■■■□ 21
ABCA7-202ENST00000433129 HNRNPKP61978 463 aaKnown RBP eCLIP13.49□□□□□ -0.251e-6■■■■□ 19.8
ABCA7-202ENST00000433129 U2AF2P26368 475 aaKnown RBP eCLIP15.89■□□□□ 0.132e-8■■■□□ 18.8
ABCA7-202ENST00000433129 PABPC4Q13310 644 aaKnown RBP eCLIP15.63■□□□□ 0.092e-6■■■□□ 18.8
ABCA7-202ENST00000433129 RBFOX2O43251 390 aaKnown RBP eCLIP12.05□□□□□ -0.486e-9■■■□□ 18.1
ABCA7-202ENST00000433129 SRSF1Q07955 248 aaKnown RBP eCLIP11.72□□□□□ -0.531e-6■■■□□ 17.9
ABCA7-202ENST00000433129 PTBP1P26599 531 aaKnown RBP eCLIP12.91□□□□□ -0.347e-8■■■□□ 17.8
ABCA7-202ENST00000433129 AARSP49588 968 aaKnown RBP eCLIP14.96□□□□□ -0.014e-6■■■□□ 17.3
ABCA7-202ENST00000433129 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.72□□□□□ -0.213e-9■■■□□ 17
ABCA7-202ENST00000433129 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.26□□□□□ -0.133e-6■■■□□ 16.2
ABCA7-202ENST00000433129 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.56■□□□□ 0.086e-7■■■□□ 16.1
ABCA7-202ENST00000433129 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.2□□□□□ -0.626e-7■■■□□ 16
ABCA7-202ENST00000433129 WDR43Q15061 677 aaKnown RBP eCLIP18.88■□□□□ 0.616e-6■■■□□ 15.9
ABCA7-202ENST00000433129 ILF3Q12906 894 aaKnown RBP eCLIP13.91□□□□□ -0.181e-8■■■□□ 15.7
ABCA7-202ENST00000433129 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.17■□□□□ 0.181e-8■■■□□ 15.4
ABCA7-202ENST00000433129 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.21■□□□□ 0.672e-6■■■□□ 15.1
ABCA7-202ENST00000433129 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.12■□□□□ 0.171e-7■■■□□ 14.6
ABCA7-202ENST00000433129 RBM15Q96T37 977 aaKnown RBP eCLIP14.87□□□□□ -0.035e-7■■□□□ 14.2
ABCA7-202ENST00000433129 XRCC6P12956 609 aaKnown RBP eCLIP16.13■□□□□ 0.172e-7■■□□□ 13.8
ABCA7-202ENST00000433129 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.23■□□□□ 0.033e-7■■□□□ 13.5
ABCA7-202ENST00000433129 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.44□□□□□ -0.13e-6■□□□□ 10.8
ABCA7-202ENST00000433129 ZNF622Q969S3 477 aaKnown RBP eCLIP16.54■□□□□ 0.243e-7■□□□□ 10.5
ABCA7-202ENST00000433129 RPS3P23396 243 aaKnown RBP eCLIP13.62□□□□□ -0.232e-6■□□□□ 10.3
ABCA7-202ENST00000433129 EIF3HO15372 352 aaKnown RBP eCLIP14.85□□□□□ -0.037e-7■□□□□ 9.9
ABCA7-202ENST00000433129 PUM1Q14671 1186 aaKnown RBP eCLIP13.82□□□□□ -0.25e-8■□□□□ 9.4
ABCA7-202ENST00000433129 HNRNPLP14866 589 aaKnown RBP eCLIP14.22□□□□□ -0.132e-8■□□□□ 9
ABCA7-202ENST00000433129 NCBP2P52298 156 aaKnown RBP eCLIP13.83□□□□□ -0.26e-7■□□□□ 8.7
ABCA7-202ENST00000433129 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.06□□□□□ -0.164e-7■□□□□ 8.2
Retrieved 52 of 52 RNA–protein pairs in 26.9 ms