RNA–Protein interactions for RNA: ENST00000431480.6

TBC1D4-204, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,347 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-204ENST00000431480 SENP3Q9H4L4 574 aaPredicted RBP23.87■■□□□ 1.41
TBC1D4-204ENST00000431480 DDRGK1Q96HY6 314 aa23.86■■□□□ 1.41
TBC1D4-204ENST00000431480 MIER1Q8N108 512 aa23.85■■□□□ 1.41
TBC1D4-204ENST00000431480 C14orf37Q86TY3 774 aa23.83■■□□□ 1.41
TBC1D4-204ENST00000431480 GOLGA6L22H0YM25 854 aa23.81■■□□□ 1.4
TBC1D4-204ENST00000431480 EIF4G2P78344 907 aaKnown RBP eCLIP23.79■■□□□ 1.4
TBC1D4-204ENST00000431480 MTUS2Q5JR59 1369 aa23.78■■□□□ 1.4
TBC1D4-204ENST00000431480 ANP32EQ9BTT0 268 aa23.75■■□□□ 1.39
TBC1D4-204ENST00000431480 DCAF1Q9Y4B6 1507 aa23.74■■□□□ 1.39
TBC1D4-204ENST00000431480 PTMAP06454 111 aaKnown RBP23.72■■□□□ 1.39
TBC1D4-204ENST00000431480 PPP1R15AO75807 674 aaPredicted RBP23.72■■□□□ 1.39
TBC1D4-204ENST00000431480 ZRSR1Q15695 479 aaKnown RBP23.72■■□□□ 1.39
TBC1D4-204ENST00000431480 TPRNQ4KMQ1 711 aa23.72■■□□□ 1.39
TBC1D4-204ENST00000431480 SENP3-EIF4A1A0A087X0R7 540 aa23.71■■□□□ 1.39
TBC1D4-204ENST00000431480 RRP7BPQ9NSQ0 103 aa23.7■■□□□ 1.38
TBC1D4-204ENST00000431480 DNTTIP2Q5QJE6 756 aaKnown RBP23.65■■□□□ 1.38
TBC1D4-204ENST00000431480 CASC1Q6TDU7 716 aa23.64■■□□□ 1.38
TBC1D4-204ENST00000431480 CFAP53Q96M91 514 aa23.63■■□□□ 1.37
TBC1D4-204ENST00000431480 TNNT2P45379 298 aaPredicted RBP23.63■■□□□ 1.37
TBC1D4-204ENST00000431480 RGL3Q3MIN7 710 aa23.62■■□□□ 1.37
TBC1D4-204ENST00000431480 SCRIBQ14160 1630 aa23.62■■□□□ 1.37
TBC1D4-204ENST00000431480 TULP1O00294 542 aaPredicted RBP23.62■■□□□ 1.37
TBC1D4-204ENST00000431480 FTSJ3Q8IY81 847 aaKnown RBP23.61■■□□□ 1.37
TBC1D4-204ENST00000431480 PPM1GO15355 546 aaPredicted RBP23.6■■□□□ 1.37
TBC1D4-204ENST00000431480 CHMP7Q8WUX9 453 aaPredicted RBP23.59■■□□□ 1.37
TBC1D4-204ENST00000431480 HAP1P54257 671 aaPredicted RBP23.57■■□□□ 1.36
TBC1D4-204ENST00000431480 KCNH8Q96L42 1107 aa23.55■■□□□ 1.36
TBC1D4-204ENST00000431480 KNSTRNQ9Y448 316 aa23.55■■□□□ 1.36
TBC1D4-204ENST00000431480 SUPT16HQ9Y5B9 1047 aaKnown RBP23.54■■□□□ 1.36
TBC1D4-204ENST00000431480 LAS1LQ9Y4W2 734 aaKnown RBP23.53■■□□□ 1.36
TBC1D4-204ENST00000431480 NEUROD2Q15784 382 aa23.53■■□□□ 1.36
TBC1D4-204ENST00000431480 TAOK2Q9UL54 1235 aa23.51■■□□□ 1.35
TBC1D4-204ENST00000431480 CLIP1P30622 1438 aa23.5■■□□□ 1.35
TBC1D4-204ENST00000431480 PLCB2Q00722 1185 aa23.49■■□□□ 1.35
TBC1D4-204ENST00000431480 CDCA8Q53HL2 280 aa23.49■■□□□ 1.35
TBC1D4-204ENST00000431480 NAP1L5Q96NT1 182 aaPredicted RBP23.48■■□□□ 1.35
TBC1D4-204ENST00000431480 ERICH6BQ5W0A0 696 aa23.47■■□□□ 1.35
TBC1D4-204ENST00000431480 MAPK8IP3Q9UPT6 1336 aa23.47■■□□□ 1.35
TBC1D4-204ENST00000431480 RGS3P49796 1198 aa23.46■■□□□ 1.35
TBC1D4-204ENST00000431480 CARD11Q9BXL7 1154 aa23.43■■□□□ 1.34
TBC1D4-204ENST00000431480 FRAT1Q92837 279 aaPredicted RBP23.43■■□□□ 1.34
TBC1D4-204ENST00000431480 RTN4Q9NQC3 1192 aaKnown RBP23.43■■□□□ 1.34
TBC1D4-204ENST00000431480 PLEKHD1A6NEE1 506 aa23.42■■□□□ 1.34
TBC1D4-204ENST00000431480 RSF1Q96T23 1441 aaPredicted RBP23.39■■□□□ 1.33
TBC1D4-204ENST00000431480 ARID4BQ4LE39 1312 aaPredicted RBP23.39■■□□□ 1.33
TBC1D4-204ENST00000431480 HSP90AB1P08238 724 aaKnown RBP23.38■■□□□ 1.33
TBC1D4-204ENST00000431480 NUDCQ9Y266 331 aa23.38■■□□□ 1.33
TBC1D4-204ENST00000431480 FGD1P98174 961 aa23.37■■□□□ 1.33
TBC1D4-204ENST00000431480 OS9Q13438 667 aaPredicted RBP23.36■■□□□ 1.33
TBC1D4-204ENST00000431480 GOLGA6L6A8MZA4 724 aa23.35■■□□□ 1.33
TBC1D4-204ENST00000431480 LMOD2Q6P5Q4 547 aa23.35■■□□□ 1.33
TBC1D4-204ENST00000431480 PPP4R2Q9NY27 417 aa23.35■■□□□ 1.33
TBC1D4-204ENST00000431480 NPHP1O15259 732 aa23.34■■□□□ 1.33
TBC1D4-204ENST00000431480 NAP1L2Q9ULW6 460 aaPredicted RBP23.33■■□□□ 1.33
TBC1D4-204ENST00000431480 ZCCHC6Q5VYS8 1495 aaKnown RBP23.32■■□□□ 1.32
TBC1D4-204ENST00000431480 NOP58Q9Y2X3 529 aaKnown RBP23.32■■□□□ 1.32
TBC1D4-204ENST00000431480 KCNJ4P48050 445 aa23.32■■□□□ 1.32
TBC1D4-204ENST00000431480 POGKQ9P215 609 aa23.31■■□□□ 1.32
TBC1D4-204ENST00000431480 CFDP1Q9UEE9 299 aaPredicted RBP23.3■■□□□ 1.32
TBC1D4-204ENST00000431480 CC2D1BQ5T0F9 858 aaKnown RBP23.29■■□□□ 1.32
TBC1D4-204ENST00000431480 CHMP4BQ9H444 224 aaKnown RBP23.28■■□□□ 1.32
TBC1D4-204ENST00000431480 U2SURPO15042 1029 aaKnown RBP23.27■■□□□ 1.32
TBC1D4-204ENST00000431480 NRDCO43847 1150 aa23.26■■□□□ 1.31
TBC1D4-204ENST00000431480 MS4A1P11836 297 aa23.24■■□□□ 1.31
TBC1D4-204ENST00000431480 GOLGA6L4A6NEF3 574 aa23.23■■□□□ 1.31
TBC1D4-204ENST00000431480 GOLGA2Q08379 1002 aa23.22■■□□□ 1.31
TBC1D4-204ENST00000431480 B4GALNT3Q6L9W6 998 aa23.21■■□□□ 1.31
TBC1D4-204ENST00000431480 HSCBQ8IWL3 235 aa23.2■■□□□ 1.3
TBC1D4-204ENST00000431480 CEP162Q5TB80 1403 aa23.2■■□□□ 1.3
TBC1D4-204ENST00000431480 GOLGA3Q08378 1498 aa23.19■■□□□ 1.3
TBC1D4-204ENST00000431480 SIN3AQ96ST3 1273 aa23.18■■□□□ 1.3
TBC1D4-204ENST00000431480 CHAF1AQ13111 956 aaPredicted RBP23.17■■□□□ 1.3
TBC1D4-204ENST00000431480 PNNQ9H307 717 aaKnown RBP23.15■■□□□ 1.3
TBC1D4-204ENST00000431480 SPRYD3Q8NCJ5 442 aa23.14■■□□□ 1.3
TBC1D4-204ENST00000431480 MSNP26038 577 aaKnown RBP23.12■■□□□ 1.29
TBC1D4-204ENST00000431480 CLSTN1O94985 981 aa23.11■■□□□ 1.29
TBC1D4-204ENST00000431480 DRC7Q8IY82 874 aa23.11■■□□□ 1.29
TBC1D4-204ENST00000431480 MCCP23508 829 aa23.1■■□□□ 1.29
TBC1D4-204ENST00000431480 NCBP3Q53F19 620 aaKnown RBP23.09■■□□□ 1.29
TBC1D4-204ENST00000431480 SOX12O15370 315 aa23.08■■□□□ 1.29
TBC1D4-204ENST00000431480 TMF1P82094 1093 aa23.07■■□□□ 1.28
TBC1D4-204ENST00000431480 L1TD1Q5T7N2 865 aaKnown RBP23.06■■□□□ 1.28
TBC1D4-204ENST00000431480 EEA1Q15075 1411 aa23.04■■□□□ 1.28
TBC1D4-204ENST00000431480 DCAF11Q8TEB1 546 aa23.03■■□□□ 1.28
TBC1D4-204ENST00000431480 ISY1Q9ULR0 285 aaKnown RBP23.03■■□□□ 1.28
TBC1D4-204ENST00000431480 SRPK2P78362 688 aaKnown RBP23■■□□□ 1.27
TBC1D4-204ENST00000431480 GNL2Q13823 731 aaKnown RBP22.99■■□□□ 1.27
TBC1D4-204ENST00000431480 MORC1Q86VD1 984 aa22.99■■□□□ 1.27
TBC1D4-204ENST00000431480 AMER1Q5JTC6 1135 aaPredicted RBP22.99■■□□□ 1.27
TBC1D4-204ENST00000431480 APBB1O00213 710 aa22.98■■□□□ 1.27
TBC1D4-204ENST00000431480 DEKP35659 375 aaKnown RBP22.98■■□□□ 1.27
TBC1D4-204ENST00000431480 SAFB2Q14151 953 aaKnown RBP eCLIP22.95■■□□□ 1.27
TBC1D4-204ENST00000431480 RTF1Q92541 710 aaKnown RBP22.95■■□□□ 1.26
TBC1D4-204ENST00000431480 CFAP44Q96MT7 982 aa22.94■■□□□ 1.26
TBC1D4-204ENST00000431480 MYO15BQ96JP2 1530 aa22.93■■□□□ 1.26
TBC1D4-204ENST00000431480 KIF27Q86VH2 1401 aa22.92■■□□□ 1.26
TBC1D4-204ENST00000431480 KIAA1211Q6ZU35 1233 aa22.92■■□□□ 1.26
TBC1D4-204ENST00000431480 CCNB3Q8WWL7 1395 aa22.91■■□□□ 1.26
TBC1D4-204ENST00000431480 WRNQ14191 1432 aaPredicted RBP eCLIP22.91■■□□□ 1.26
TBC1D4-204ENST00000431480 KANK1Q14678 1352 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms