RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 CYB5RLQ6IPT4 315 aa14.63□□□□□ -0.07
ECHDC1-207ENST00000430841 FBLN2P98095 1184 aa14.62□□□□□ -0.07
ECHDC1-207ENST00000430841 CHD1O14646 1710 aa14.61□□□□□ -0.07
ECHDC1-207ENST00000430841 DNMBPQ6XZF7 1577 aa14.61□□□□□ -0.07
ECHDC1-207ENST00000430841 CCDC88BA6NC98 1476 aa14.58□□□□□ -0.08
ECHDC1-207ENST00000430841 ATF5Q9Y2D1 282 aaPredicted RBP14.58□□□□□ -0.08
ECHDC1-207ENST00000430841 MYCNP04198 464 aaPredicted RBP14.56□□□□□ -0.08
ECHDC1-207ENST00000430841 PIP4P2Q8N4L2 257 aa14.56□□□□□ -0.08
ECHDC1-207ENST00000430841 AQRO60306 1485 aaKnown RBP eCLIP14.52□□□□□ -0.08
ECHDC1-207ENST00000430841 AKT1S1Q96B36 256 aa14.52□□□□□ -0.09
ECHDC1-207ENST00000430841 ARAP1Q96P48 1450 aa14.51□□□□□ -0.09
ECHDC1-207ENST00000430841 TARBP1Q13395 1621 aaKnown RBP14.5□□□□□ -0.09
ECHDC1-207ENST00000430841 REM2Q8IYK8 340 aaPredicted RBP14.49□□□□□ -0.09
ECHDC1-207ENST00000430841 POLA1P09884 1462 aaPredicted RBP14.47□□□□□ -0.09
ECHDC1-207ENST00000430841 SYNJ1O43426 1573 aa14.46□□□□□ -0.09
ECHDC1-207ENST00000430841 WDR97A6NE52 1622 aa14.44□□□□□ -0.1
ECHDC1-207ENST00000430841 CHMP7Q8WUX9 453 aaPredicted RBP14.43□□□□□ -0.1
ECHDC1-207ENST00000430841 SNAPC4Q5SXM2 1469 aa14.43□□□□□ -0.1
ECHDC1-207ENST00000430841 SOGA1O94964 1423 aa14.42□□□□□ -0.1
ECHDC1-207ENST00000430841 EVX2Q03828 476 aa14.41□□□□□ -0.1
ECHDC1-207ENST00000430841 RAD54L2Q9Y4B4 1467 aa14.4□□□□□ -0.1
ECHDC1-207ENST00000430841 TDRD9Q8NDG6 1382 aaKnown RBP14.4□□□□□ -0.1
ECHDC1-207ENST00000430841 MAGI1Q96QZ7 1491 aaPredicted RBP14.39□□□□□ -0.11
ECHDC1-207ENST00000430841 CLASP1Q7Z460 1538 aa14.37□□□□□ -0.11
ECHDC1-207ENST00000430841 PITPNM1O00562 1244 aa14.37□□□□□ -0.11
ECHDC1-207ENST00000430841 FGD5Q6ZNL6 1462 aa14.37□□□□□ -0.11
ECHDC1-207ENST00000430841 FXR2P51116 673 aaKnown RBP eCLIP14.36□□□□□ -0.11
ECHDC1-207ENST00000430841 GRIN2BQ13224 1484 aa14.36□□□□□ -0.11
ECHDC1-207ENST00000430841 SYNJ2O15056 1496 aa14.33□□□□□ -0.12
ECHDC1-207ENST00000430841 HAX1O00165 279 aa14.32□□□□□ -0.12
ECHDC1-207ENST00000430841 PBRM1Q86U86 1689 aa14.31□□□□□ -0.12
ECHDC1-207ENST00000430841 GAPVD1Q14C86 1478 aa14.29□□□□□ -0.12
ECHDC1-207ENST00000430841 CUX1P39880 1505 aa14.25□□□□□ -0.13
ECHDC1-207ENST00000430841 ZBTB12Q9Y330 459 aaPredicted RBP14.21□□□□□ -0.13
ECHDC1-207ENST00000430841 ABCA5Q8WWZ7 1642 aa14.18□□□□□ -0.14
ECHDC1-207ENST00000430841 ABCA10Q8WWZ4 1543 aa14.16□□□□□ -0.14
ECHDC1-207ENST00000430841 GRIN2AQ12879 1464 aa14.16□□□□□ -0.14
ECHDC1-207ENST00000430841 FOXD4L1Q9NU39 408 aa14.13□□□□□ -0.15
ECHDC1-207ENST00000430841 ADAMTS12P58397 1594 aa14.13□□□□□ -0.15
ECHDC1-207ENST00000430841 WRNQ14191 1432 aaPredicted RBP eCLIP14.12□□□□□ -0.15
ECHDC1-207ENST00000430841 CEP170Q5SW79 1584 aa14.12□□□□□ -0.15
ECHDC1-207ENST00000430841 ERCC6L2Q5T890 1561 aa14.09□□□□□ -0.15
ECHDC1-207ENST00000430841 FHAD1B1AJZ9 1412 aa14.07□□□□□ -0.16
ECHDC1-207ENST00000430841 NPM1P06748 294 aaKnown RBP eCLIP14.06□□□□□ -0.16
ECHDC1-207ENST00000430841 NUP160Q12769 1436 aa14.06□□□□□ -0.16
ECHDC1-207ENST00000430841 SHROOM2Q13796 1616 aa14.04□□□□□ -0.16
ECHDC1-207ENST00000430841 KIF13AQ9H1H9 1805 aa14.02□□□□□ -0.16
ECHDC1-207ENST00000430841 ERICH3Q5RHP9 1530 aa14.02□□□□□ -0.16
ECHDC1-207ENST00000430841 ZBTB22O15209 634 aa14.02□□□□□ -0.17
ECHDC1-207ENST00000430841 PRG4Q92954 1404 aaPredicted RBP14.01□□□□□ -0.17
ECHDC1-207ENST00000430841 TOP2BQ02880 1626 aa14.01□□□□□ -0.17
ECHDC1-207ENST00000430841 BIVM-ERCC5R4GMW8 1640 aa14.01□□□□□ -0.17
ECHDC1-207ENST00000430841 SUPT5HO00267 1087 aaKnown RBP13.99□□□□□ -0.17
ECHDC1-207ENST00000430841 SLC4A1APQ9BWU0 796 aaKnown RBP13.99□□□□□ -0.17
ECHDC1-207ENST00000430841 FAM69CQ0P6D2 419 aa13.97□□□□□ -0.17
ECHDC1-207ENST00000430841 EHMT2Q96KQ7 1210 aa13.96□□□□□ -0.17
ECHDC1-207ENST00000430841 KDM6BO15054 1643 aa13.94□□□□□ -0.18
ECHDC1-207ENST00000430841 C19orf67A6NJJ6 358 aa13.93□□□□□ -0.18
ECHDC1-207ENST00000430841 JPH4Q96JJ6 628 aa13.93□□□□□ -0.18
ECHDC1-207ENST00000430841 RUSC2Q8N2Y8 1516 aa13.93□□□□□ -0.18
ECHDC1-207ENST00000430841 ABCC10Q5T3U5 1492 aa13.93□□□□□ -0.18
ECHDC1-207ENST00000430841 MAPKBP1O60336 1514 aa13.92□□□□□ -0.18
ECHDC1-207ENST00000430841 PRKAR2AP13861 404 aaKnown RBP13.91□□□□□ -0.18
ECHDC1-207ENST00000430841 DIP2BQ9P265 1576 aa13.9□□□□□ -0.18
ECHDC1-207ENST00000430841 TSPOAP1O95153 1857 aa13.89□□□□□ -0.19
ECHDC1-207ENST00000430841 GABBR2O75899 941 aa13.87□□□□□ -0.19
ECHDC1-207ENST00000430841 ADCY10Q96PN6 1610 aa13.86□□□□□ -0.19
ECHDC1-207ENST00000430841 SPDYE2BA6NHP3 402 aa13.85□□□□□ -0.19
ECHDC1-207ENST00000430841 SPDYE6P0CI01 402 aa13.85□□□□□ -0.19
ECHDC1-207ENST00000430841 SPDYE2Q495Y8 402 aa13.85□□□□□ -0.19
ECHDC1-207ENST00000430841 MKRN4PQ13434 485 aaPredicted RBP13.84□□□□□ -0.19
ECHDC1-207ENST00000430841 CUL7Q14999 1698 aa13.83□□□□□ -0.2
ECHDC1-207ENST00000430841 TTBK1Q5TCY1 1321 aaPredicted RBP13.83□□□□□ -0.2
ECHDC1-207ENST00000430841 KIAA0586Q9BVV6 1533 aa13.8□□□□□ -0.2
ECHDC1-207ENST00000430841 LHX8Q68G74 356 aa13.8□□□□□ -0.2
ECHDC1-207ENST00000430841 CARMIL2Q6F5E8 1435 aa13.79□□□□□ -0.2
ECHDC1-207ENST00000430841 KIF27Q86VH2 1401 aa13.78□□□□□ -0.2
ECHDC1-207ENST00000430841 PTPRGP23470 1445 aa13.77□□□□□ -0.21
ECHDC1-207ENST00000430841 CLEC11AQ9Y240 323 aa13.77□□□□□ -0.21
ECHDC1-207ENST00000430841 KDM4FA0A1W2PPD8 638 aa13.74□□□□□ -0.21
ECHDC1-207ENST00000430841 PLB1Q6P1J6 1458 aa13.74□□□□□ -0.21
ECHDC1-207ENST00000430841 CHADLQ6NUI6 762 aa13.73□□□□□ -0.21
ECHDC1-207ENST00000430841 SSUH2Q9Y2M2 353 aa13.73□□□□□ -0.21
ECHDC1-207ENST00000430841 POTEIP0CG38 1075 aa13.72□□□□□ -0.21
ECHDC1-207ENST00000430841 SPDYE1Q8NFV5 336 aaPredicted RBP13.72□□□□□ -0.21
ECHDC1-207ENST00000430841 ABCC2Q92887 1545 aa13.72□□□□□ -0.21
ECHDC1-207ENST00000430841 TNIKQ9UKE5 1360 aa13.71□□□□□ -0.21
ECHDC1-207ENST00000430841 ADGRL1O94910 1474 aa13.7□□□□□ -0.22
ECHDC1-207ENST00000430841 ATXN8OSP0DMR3 200 aa13.7□□□□□ -0.22
ECHDC1-207ENST00000430841 ASXL2Q76L83 1435 aa13.7□□□□□ -0.22
ECHDC1-207ENST00000430841 IQGAP2Q13576 1575 aa13.7□□□□□ -0.22
ECHDC1-207ENST00000430841 TEX14Q8IWB6 1497 aa13.69□□□□□ -0.22
ECHDC1-207ENST00000430841 ILDR1Q86SU0 546 aaPredicted RBP13.69□□□□□ -0.22
ECHDC1-207ENST00000430841 GLI2P10070 1586 aa13.67□□□□□ -0.22
ECHDC1-207ENST00000430841 IGF1RP08069 1367 aa13.67□□□□□ -0.22
ECHDC1-207ENST00000430841 CARMIL1Q5VZK9 1371 aa13.65□□□□□ -0.22
ECHDC1-207ENST00000430841 UACAQ9BZF9 1416 aa13.64□□□□□ -0.23
ECHDC1-207ENST00000430841 PPRC1Q5VV67 1664 aaKnown RBP13.63□□□□□ -0.23
ECHDC1-207ENST00000430841 UHRF1BP1LA0JNW5 1464 aa13.62□□□□□ -0.23
ECHDC1-207ENST00000430841 ZNF692Q9BU19 519 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms