RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 PELP1Q8IZL8 1130 aaKnown RBP9.59□□□□□ -0.87
HMGB1P9-201ENST00000429856 SLC39A7Q92504 469 aa9.58□□□□□ -0.88
HMGB1P9-201ENST00000429856 ASTLQ6HA08 431 aaPredicted RBP9.57□□□□□ -0.88
HMGB1P9-201ENST00000429856 MAMSTRQ6ZN01 415 aa9.56□□□□□ -0.88
HMGB1P9-201ENST00000429856 MS4A3Q96HJ5 214 aa9.56□□□□□ -0.88
HMGB1P9-201ENST00000429856 METRNQ9UJH8 293 aa9.55□□□□□ -0.88
HMGB1P9-201ENST00000429856 ATMINO43313 823 aaPredicted RBP9.54□□□□□ -0.88
HMGB1P9-201ENST00000429856 TSPYL2Q9H2G4 693 aaPredicted RBP9.53□□□□□ -0.88
HMGB1P9-201ENST00000429856 PLEKHG5O94827 1062 aa9.5□□□□□ -0.89
HMGB1P9-201ENST00000429856 SCUBE2Q9NQ36 999 aa9.46□□□□□ -0.9
HMGB1P9-201ENST00000429856 CCDC61Q9Y6R9 512 aa9.46□□□□□ -0.9
HMGB1P9-201ENST00000429856 PROM2Q8N271 834 aa9.45□□□□□ -0.9
HMGB1P9-201ENST00000429856 KIF12Q96FN5 646 aa9.45□□□□□ -0.9
HMGB1P9-201ENST00000429856 ATN1P54259 1190 aaPredicted RBP9.44□□□□□ -0.9
HMGB1P9-201ENST00000429856 MIER1Q8N108 512 aa9.44□□□□□ -0.9
HMGB1P9-201ENST00000429856 POTEJP0CG39 1038 aa9.43□□□□□ -0.9
HMGB1P9-201ENST00000429856 FAM163AQ96GL9 167 aaPredicted RBP9.41□□□□□ -0.9
HMGB1P9-201ENST00000429856 TIE1P35590 1138 aa9.38□□□□□ -0.91
HMGB1P9-201ENST00000429856 BMP2KQ9NSY1 1161 aaPredicted RBP9.38□□□□□ -0.91
HMGB1P9-201ENST00000429856 MAP3K13O43283 966 aa9.37□□□□□ -0.91
HMGB1P9-201ENST00000429856 SEC24BO95487 1268 aa9.36□□□□□ -0.91
HMGB1P9-201ENST00000429856 RASEFQ8IZ41 740 aa9.33□□□□□ -0.92
HMGB1P9-201ENST00000429856 PLCD3Q8N3E9 789 aa9.32□□□□□ -0.92
HMGB1P9-201ENST00000429856 TRPC6Q9Y210 931 aa9.32□□□□□ -0.92
HMGB1P9-201ENST00000429856 SGIP1Q9BQI5 828 aa9.31□□□□□ -0.92
HMGB1P9-201ENST00000429856 POTEFA5A3E0 1075 aa9.3□□□□□ -0.92
HMGB1P9-201ENST00000429856 ZBTB47Q9UFB7 747 aaPredicted RBP9.3□□□□□ -0.92
HMGB1P9-201ENST00000429856 TTLL13PA6NNM8 815 aa9.29□□□□□ -0.92
HMGB1P9-201ENST00000429856 IER5LQ5T953 404 aa9.28□□□□□ -0.92
HMGB1P9-201ENST00000429856 CDAN1Q8IWY9 1227 aa9.28□□□□□ -0.92
HMGB1P9-201ENST00000429856 PCDHB13Q9Y5F0 798 aa9.27□□□□□ -0.93
HMGB1P9-201ENST00000429856 COLQQ9Y215 455 aaPredicted RBP9.26□□□□□ -0.93
HMGB1P9-201ENST00000429856 TRIM35Q9UPQ4 493 aa9.24□□□□□ -0.93
HMGB1P9-201ENST00000429856 NUBP1P53384 320 aa9.19□□□□□ -0.94
HMGB1P9-201ENST00000429856 MMRN1Q13201 1228 aa9.19□□□□□ -0.94
HMGB1P9-201ENST00000429856 FAM212AQ96EL1 285 aa9.19□□□□□ -0.94
HMGB1P9-201ENST00000429856 SLAIN1Q8ND83 568 aa9.18□□□□□ -0.94
HMGB1P9-201ENST00000429856 TMEM106CQ9BVX2 250 aa9.18□□□□□ -0.94
HMGB1P9-201ENST00000429856 PLCG2P16885 1265 aa9.17□□□□□ -0.94
HMGB1P9-201ENST00000429856 IFNL1Q8IU54 200 aa9.17□□□□□ -0.94
HMGB1P9-201ENST00000429856 ST18O60284 1047 aa9.11□□□□□ -0.95
HMGB1P9-201ENST00000429856 DCAF8Q5TAQ9 597 aa9.11□□□□□ -0.95
HMGB1P9-201ENST00000429856 SPNS2Q8IVW8 549 aa9.1□□□□□ -0.95
HMGB1P9-201ENST00000429856 OCEL1Q9H607 264 aa9.1□□□□□ -0.95
HMGB1P9-201ENST00000429856 SNPHO15079 494 aa9.08□□□□□ -0.96
HMGB1P9-201ENST00000429856 IRX5P78411 483 aaPredicted RBP9.08□□□□□ -0.96
HMGB1P9-201ENST00000429856 TMEM121BQ9BXQ6 578 aaPredicted RBP9.05□□□□□ -0.96
HMGB1P9-201ENST00000429856 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.05□□□□□ -0.96
HMGB1P9-201ENST00000429856 PYGBP11216 843 aa9.03□□□□□ -0.96
HMGB1P9-201ENST00000429856 FKBP8Q14318 412 aa9.02□□□□□ -0.97
HMGB1P9-201ENST00000429856 FBXO3Q9UK99 471 aa9.01□□□□□ -0.97
HMGB1P9-201ENST00000429856 PCDHB8Q9UN66 801 aa9□□□□□ -0.97
HMGB1P9-201ENST00000429856 GOLGA2Q08379 1002 aa8.98□□□□□ -0.97
HMGB1P9-201ENST00000429856 L3MBTL3Q96JM7 780 aaPredicted RBP8.96□□□□□ -0.98
HMGB1P9-201ENST00000429856 MKRN3Q13064 507 aaKnown RBP8.95□□□□□ -0.98
HMGB1P9-201ENST00000429856 GSE1Q14687 1217 aa8.95□□□□□ -0.98
HMGB1P9-201ENST00000429856 ZNF467Q7Z7K2 595 aaPredicted RBP8.95□□□□□ -0.98
HMGB1P9-201ENST00000429856 C3orf67Q6ZVT6 689 aa8.94□□□□□ -0.98
HMGB1P9-201ENST00000429856 KLHL34Q8N239 644 aa8.94□□□□□ -0.98
HMGB1P9-201ENST00000429856 MARVELD3Q96A59 401 aa8.93□□□□□ -0.98
HMGB1P9-201ENST00000429856 CHRM1P11229 460 aaPredicted RBP8.89□□□□□ -0.99
HMGB1P9-201ENST00000429856 PDCD7Q8N8D1 485 aaKnown RBP8.88□□□□□ -0.99
HMGB1P9-201ENST00000429856 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.88□□□□□ -0.99
HMGB1P9-201ENST00000429856 EMP3P54852 163 aa8.87□□□□□ -0.99
HMGB1P9-201ENST00000429856 PSEN1P49768 467 aa8.85□□□□□ -0.99
HMGB1P9-201ENST00000429856 G3V3G9 751 aa8.82□□□□□ -1
HMGB1P9-201ENST00000429856 VASPP50552 380 aaPredicted RBP8.82□□□□□ -1
HMGB1P9-201ENST00000429856 FAM205CA6NFA0 338 aa8.8□□□□□ -1
HMGB1P9-201ENST00000429856 PDAP1Q13442 181 aaKnown RBP8.8□□□□□ -1
HMGB1P9-201ENST00000429856 HS3ST6Q96QI5 342 aa8.79□□□□□ -1
HMGB1P9-201ENST00000429856 ILDR1Q86SU0 546 aaPredicted RBP8.76□□□□□ -1.01
HMGB1P9-201ENST00000429856 BOLA1Q9Y3E2 137 aa8.75□□□□□ -1.01
HMGB1P9-201ENST00000429856 POTEB3A0JP26 581 aa8.74□□□□□ -1.01
HMGB1P9-201ENST00000429856 DPY19L2Q6NUT2 758 aa8.74□□□□□ -1.01
HMGB1P9-201ENST00000429856 POTEBQ6S5H4 581 aa8.74□□□□□ -1.01
HMGB1P9-201ENST00000429856 KRTAP3-3Q9BYR6 98 aa8.74□□□□□ -1.01
HMGB1P9-201ENST00000429856 KRTAP3-2Q9BYR7 98 aa8.74□□□□□ -1.01
HMGB1P9-201ENST00000429856 ZNF710Q8N1W2 664 aa8.73□□□□□ -1.01
HMGB1P9-201ENST00000429856 CABP2Q9NPB3 220 aa8.73□□□□□ -1.01
HMGB1P9-201ENST00000429856 CIZ1Q9ULV3 898 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P9-201ENST00000429856 SPOCK2Q92563 424 aa8.72□□□□□ -1.01
HMGB1P9-201ENST00000429856 DOK7Q18PE1 504 aa8.7□□□□□ -1.02
HMGB1P9-201ENST00000429856 HOXB3P14651 431 aaPredicted RBP8.68□□□□□ -1.02
HMGB1P9-201ENST00000429856 HOXB1P14653 301 aaPredicted RBP8.68□□□□□ -1.02
HMGB1P9-201ENST00000429856 ERBB3P21860 1342 aa8.68□□□□□ -1.02
HMGB1P9-201ENST00000429856 RIMBP2O15034 1052 aa8.67□□□□□ -1.02
HMGB1P9-201ENST00000429856 IFNLR1Q8IU57 520 aaPredicted RBP8.62□□□□□ -1.03
HMGB1P9-201ENST00000429856 TRIM41Q8WV44 630 aa8.61□□□□□ -1.03
HMGB1P9-201ENST00000429856 EFCAB3Q8N7B9 438 aa8.59□□□□□ -1.03
HMGB1P9-201ENST00000429856 ZSWIM6Q9HCJ5 1215 aa8.59□□□□□ -1.03
HMGB1P9-201ENST00000429856 VARS2Q5ST30 1063 aaKnown RBP8.58□□□□□ -1.04
HMGB1P9-201ENST00000429856 RNF166Q96A37 237 aaPredicted RBP8.57□□□□□ -1.04
HMGB1P9-201ENST00000429856 MYT1LQ9UL68 1186 aa8.56□□□□□ -1.04
HMGB1P9-201ENST00000429856 SOX12O15370 315 aa8.55□□□□□ -1.04
HMGB1P9-201ENST00000429856 ZNF687Q8N1G0 1237 aa8.54□□□□□ -1.04
HMGB1P9-201ENST00000429856 MICALL2Q8IY33 904 aa8.53□□□□□ -1.04
HMGB1P9-201ENST00000429856 PTGER2P43116 358 aa8.51□□□□□ -1.05
HMGB1P9-201ENST00000429856 GPR153Q6NV75 609 aa8.5□□□□□ -1.05
HMGB1P9-201ENST00000429856 TMEM92Q6UXU6 159 aa8.49□□□□□ -1.05
HMGB1P9-201ENST00000429856 RIOK3O14730 519 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms