RNA–Protein interactions for RNA: ENST00000429670.2

GYPB-201, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-201ENST00000429670 MNX1P50219 401 aaPredicted RBP10.42□□□□□ -0.74
GYPB-201ENST00000429670 ASTLQ6HA08 431 aaPredicted RBP10.42□□□□□ -0.74
GYPB-201ENST00000429670 METRNQ9UJH8 293 aa10.4□□□□□ -0.74
GYPB-201ENST00000429670 ATMINO43313 823 aaPredicted RBP10.38□□□□□ -0.75
GYPB-201ENST00000429670 MS4A3Q96HJ5 214 aa10.37□□□□□ -0.75
GYPB-201ENST00000429670 SCUBE2Q9NQ36 999 aa10.31□□□□□ -0.76
GYPB-201ENST00000429670 TSPYL2Q9H2G4 693 aaPredicted RBP10.29□□□□□ -0.76
GYPB-201ENST00000429670 POTEJP0CG39 1038 aa10.28□□□□□ -0.76
GYPB-201ENST00000429670 FAM163AQ96GL9 167 aaPredicted RBP10.27□□□□□ -0.77
GYPB-201ENST00000429670 ATN1P54259 1190 aaPredicted RBP10.25□□□□□ -0.77
GYPB-201ENST00000429670 CCDC61Q9Y6R9 512 aa10.25□□□□□ -0.77
GYPB-201ENST00000429670 PLEKHG5O94827 1062 aa10.23□□□□□ -0.77
GYPB-201ENST00000429670 KIF12Q96FN5 646 aa10.23□□□□□ -0.77
GYPB-201ENST00000429670 TIE1P35590 1138 aa10.18□□□□□ -0.78
GYPB-201ENST00000429670 PROM2Q8N271 834 aa10.17□□□□□ -0.78
GYPB-201ENST00000429670 BMP2KQ9NSY1 1161 aaPredicted RBP10.17□□□□□ -0.78
GYPB-201ENST00000429670 LCE2DQ5TA82 110 aaPredicted RBP10.15□□□□□ -0.78
GYPB-201ENST00000429670 EHMT2Q96KQ7 1210 aa10.15□□□□□ -0.78
GYPB-201ENST00000429670 SEC24BO95487 1268 aa10.14□□□□□ -0.79
GYPB-201ENST00000429670 MAP3K13O43283 966 aa10.13□□□□□ -0.79
GYPB-201ENST00000429670 MIER1Q8N108 512 aa10.13□□□□□ -0.79
GYPB-201ENST00000429670 POTEFA5A3E0 1075 aa10.12□□□□□ -0.79
GYPB-201ENST00000429670 SGIP1Q9BQI5 828 aa10.09□□□□□ -0.79
GYPB-201ENST00000429670 IER5LQ5T953 404 aa10.08□□□□□ -0.8
GYPB-201ENST00000429670 TRPC6Q9Y210 931 aa10.08□□□□□ -0.8
GYPB-201ENST00000429670 TTLL13PA6NNM8 815 aa10.07□□□□□ -0.8
GYPB-201ENST00000429670 RASEFQ8IZ41 740 aa10.05□□□□□ -0.8
GYPB-201ENST00000429670 COLQQ9Y215 455 aaPredicted RBP10.05□□□□□ -0.8
GYPB-201ENST00000429670 CDAN1Q8IWY9 1227 aa10.04□□□□□ -0.8
GYPB-201ENST00000429670 ZBTB47Q9UFB7 747 aaPredicted RBP10.01□□□□□ -0.81
GYPB-201ENST00000429670 TRIM35Q9UPQ4 493 aa10.01□□□□□ -0.81
GYPB-201ENST00000429670 PCDHB13Q9Y5F0 798 aa10□□□□□ -0.81
GYPB-201ENST00000429670 PLCD3Q8N3E9 789 aa9.99□□□□□ -0.81
GYPB-201ENST00000429670 SLAIN1Q8ND83 568 aa9.98□□□□□ -0.81
GYPB-201ENST00000429670 ST18O60284 1047 aa9.93□□□□□ -0.82
GYPB-201ENST00000429670 PLCG2P16885 1265 aa9.93□□□□□ -0.82
GYPB-201ENST00000429670 TMEM106CQ9BVX2 250 aa9.91□□□□□ -0.82
GYPB-201ENST00000429670 NUBP1P53384 320 aa9.9□□□□□ -0.82
GYPB-201ENST00000429670 IFNL1Q8IU54 200 aa9.9□□□□□ -0.82
GYPB-201ENST00000429670 SNPHO15079 494 aa9.89□□□□□ -0.83
GYPB-201ENST00000429670 FAM212AQ96EL1 285 aa9.89□□□□□ -0.83
GYPB-201ENST00000429670 TMEM121BQ9BXQ6 578 aaPredicted RBP9.87□□□□□ -0.83
GYPB-201ENST00000429670 IRX5P78411 483 aaPredicted RBP9.85□□□□□ -0.83
GYPB-201ENST00000429670 OCEL1Q9H607 264 aa9.85□□□□□ -0.83
GYPB-201ENST00000429670 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.82□□□□□ -0.84
GYPB-201ENST00000429670 MMRN1Q13201 1228 aa9.8□□□□□ -0.84
GYPB-201ENST00000429670 SPNS2Q8IVW8 549 aa9.79□□□□□ -0.84
GYPB-201ENST00000429670 DCAF8Q5TAQ9 597 aa9.77□□□□□ -0.85
GYPB-201ENST00000429670 PYGBP11216 843 aa9.71□□□□□ -0.86
GYPB-201ENST00000429670 L3MBTL3Q96JM7 780 aaPredicted RBP9.71□□□□□ -0.86
GYPB-201ENST00000429670 MARVELD3Q96A59 401 aa9.69□□□□□ -0.86
GYPB-201ENST00000429670 GOLGA2Q08379 1002 aa9.67□□□□□ -0.86
GYPB-201ENST00000429670 C3orf67Q6ZVT6 689 aa9.67□□□□□ -0.86
GYPB-201ENST00000429670 PCDHB8Q9UN66 801 aa9.67□□□□□ -0.86
GYPB-201ENST00000429670 MKRN3Q13064 507 aaKnown RBP9.66□□□□□ -0.86
GYPB-201ENST00000429670 EMP3P54852 163 aa9.64□□□□□ -0.87
GYPB-201ENST00000429670 ZNF467Q7Z7K2 595 aaPredicted RBP9.64□□□□□ -0.87
GYPB-201ENST00000429670 GSE1Q14687 1217 aa9.62□□□□□ -0.87
GYPB-201ENST00000429670 FBXO3Q9UK99 471 aa9.62□□□□□ -0.87
GYPB-201ENST00000429670 PDCD7Q8N8D1 485 aaKnown RBP9.6□□□□□ -0.87
GYPB-201ENST00000429670 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.59□□□□□ -0.87
GYPB-201ENST00000429670 FKBP8Q14318 412 aa9.58□□□□□ -0.88
GYPB-201ENST00000429670 FAM205CA6NFA0 338 aa9.57□□□□□ -0.88
GYPB-201ENST00000429670 CHRM1P11229 460 aaPredicted RBP9.57□□□□□ -0.88
GYPB-201ENST00000429670 HS3ST6Q96QI5 342 aa9.57□□□□□ -0.88
GYPB-201ENST00000429670 KLHL34Q8N239 644 aa9.54□□□□□ -0.88
GYPB-201ENST00000429670 PSEN1P49768 467 aa9.53□□□□□ -0.88
GYPB-201ENST00000429670 KRTAP3-3Q9BYR6 98 aa9.53□□□□□ -0.88
GYPB-201ENST00000429670 KRTAP3-2Q9BYR7 98 aa9.53□□□□□ -0.88
GYPB-201ENST00000429670 G3V3G9 751 aa9.52□□□□□ -0.89
GYPB-201ENST00000429670 POTEB3A0JP26 581 aa9.5□□□□□ -0.89
GYPB-201ENST00000429670 POTEBQ6S5H4 581 aa9.5□□□□□ -0.89
GYPB-201ENST00000429670 ILDR1Q86SU0 546 aaPredicted RBP9.48□□□□□ -0.89
GYPB-201ENST00000429670 PDAP1Q13442 181 aaKnown RBP9.47□□□□□ -0.89
GYPB-201ENST00000429670 ZNF710Q8N1W2 664 aa9.46□□□□□ -0.9
GYPB-201ENST00000429670 BOLA1Q9Y3E2 137 aa9.45□□□□□ -0.9
GYPB-201ENST00000429670 HOXB1P14653 301 aaPredicted RBP9.44□□□□□ -0.9
GYPB-201ENST00000429670 DOK7Q18PE1 504 aa9.43□□□□□ -0.9
GYPB-201ENST00000429670 DPY19L2Q6NUT2 758 aa9.42□□□□□ -0.9
GYPB-201ENST00000429670 ERBB3P21860 1342 aa9.41□□□□□ -0.9
GYPB-201ENST00000429670 HOXB3P14651 431 aaPredicted RBP9.41□□□□□ -0.9
GYPB-201ENST00000429670 VASPP50552 380 aaPredicted RBP9.41□□□□□ -0.9
GYPB-201ENST00000429670 RIMBP2O15034 1052 aa9.4□□□□□ -0.9
GYPB-201ENST00000429670 CABP2Q9NPB3 220 aa9.39□□□□□ -0.91
GYPB-201ENST00000429670 RNF166Q96A37 237 aaPredicted RBP9.36□□□□□ -0.91
GYPB-201ENST00000429670 ZSWIM6Q9HCJ5 1215 aa9.32□□□□□ -0.92
GYPB-201ENST00000429670 CIZ1Q9ULV3 898 aaPredicted RBP9.32□□□□□ -0.92
GYPB-201ENST00000429670 SPOCK2Q92563 424 aa9.31□□□□□ -0.92
GYPB-201ENST00000429670 MYT1LQ9UL68 1186 aa9.31□□□□□ -0.92
GYPB-201ENST00000429670 VARS2Q5ST30 1063 aaKnown RBP9.3□□□□□ -0.92
GYPB-201ENST00000429670 ZNF687Q8N1G0 1237 aa9.3□□□□□ -0.92
GYPB-201ENST00000429670 PTGER2P43116 358 aa9.29□□□□□ -0.92
GYPB-201ENST00000429670 TRIM41Q8WV44 630 aa9.24□□□□□ -0.93
GYPB-201ENST00000429670 EFCAB3Q8N7B9 438 aa9.23□□□□□ -0.93
GYPB-201ENST00000429670 GPR153Q6NV75 609 aa9.21□□□□□ -0.94
GYPB-201ENST00000429670 SOX12O15370 315 aa9.2□□□□□ -0.94
GYPB-201ENST00000429670 MICALL2Q8IY33 904 aa9.2□□□□□ -0.94
GYPB-201ENST00000429670 IFNLR1Q8IU57 520 aaPredicted RBP9.19□□□□□ -0.94
GYPB-201ENST00000429670 ANKRD13DQ6ZTN6 518 aa9.17□□□□□ -0.94
GYPB-201ENST00000429670 TMEM92Q6UXU6 159 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms