RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 DCBLD2Q96PD2 775 aa12.3□□□□□ -0.44
LINC02541-201ENST00000427157 VASPP50552 380 aaPredicted RBP12.26□□□□□ -0.45
LINC02541-201ENST00000427157 NUBP1P53384 320 aa12.26□□□□□ -0.45
LINC02541-201ENST00000427157 MS4A3Q96HJ5 214 aa12.25□□□□□ -0.45
LINC02541-201ENST00000427157 KIF12Q96FN5 646 aa12.21□□□□□ -0.45
LINC02541-201ENST00000427157 FAM212AQ96EL1 285 aa12.17□□□□□ -0.46
LINC02541-201ENST00000427157 MAP3K13O43283 966 aa12.15□□□□□ -0.46
LINC02541-201ENST00000427157 LHX8Q68G74 356 aa12.14□□□□□ -0.47
LINC02541-201ENST00000427157 KLHL34Q8N239 644 aa12.12□□□□□ -0.47
LINC02541-201ENST00000427157 ASTLQ6HA08 431 aaPredicted RBP12.1□□□□□ -0.47
LINC02541-201ENST00000427157 PELP1Q8IZL8 1130 aaKnown RBP12.1□□□□□ -0.47
LINC02541-201ENST00000427157 ATMINO43313 823 aaPredicted RBP12.09□□□□□ -0.47
LINC02541-201ENST00000427157 TRPC6Q9Y210 931 aa12.09□□□□□ -0.47
LINC02541-201ENST00000427157 DCAF8Q5TAQ9 597 aa12.06□□□□□ -0.48
LINC02541-201ENST00000427157 IFNLR1Q8IU57 520 aaPredicted RBP12.06□□□□□ -0.48
LINC02541-201ENST00000427157 PCDHB13Q9Y5F0 798 aa12.06□□□□□ -0.48
LINC02541-201ENST00000427157 SGIP1Q9BQI5 828 aa12.04□□□□□ -0.48
LINC02541-201ENST00000427157 BMP2KQ9NSY1 1161 aaPredicted RBP12.04□□□□□ -0.48
LINC02541-201ENST00000427157 ATN1P54259 1190 aaPredicted RBP12.02□□□□□ -0.49
LINC02541-201ENST00000427157 TIE1P35590 1138 aa12.01□□□□□ -0.49
LINC02541-201ENST00000427157 IFNL1Q8IU54 200 aa12.01□□□□□ -0.49
LINC02541-201ENST00000427157 PYGBP11216 843 aa12□□□□□ -0.49
LINC02541-201ENST00000427157 METRNQ9UJH8 293 aa11.99□□□□□ -0.49
LINC02541-201ENST00000427157 TTLL13PA6NNM8 815 aa11.97□□□□□ -0.49
LINC02541-201ENST00000427157 GSE1Q14687 1217 aa11.97□□□□□ -0.49
LINC02541-201ENST00000427157 SLC39A7Q92504 469 aa11.97□□□□□ -0.49
LINC02541-201ENST00000427157 SPOCK2Q92563 424 aa11.96□□□□□ -0.49
LINC02541-201ENST00000427157 POTEB2H3BUK9 544 aa11.95□□□□□ -0.5
LINC02541-201ENST00000427157 C7P10643 843 aa11.95□□□□□ -0.5
LINC02541-201ENST00000427157 PCDHB8Q9UN66 801 aa11.89□□□□□ -0.51
LINC02541-201ENST00000427157 TRIM35Q9UPQ4 493 aa11.89□□□□□ -0.51
LINC02541-201ENST00000427157 TMEM106CQ9BVX2 250 aa11.88□□□□□ -0.51
LINC02541-201ENST00000427157 POTEFA5A3E0 1075 aa11.86□□□□□ -0.51
LINC02541-201ENST00000427157 CIZ1Q9ULV3 898 aaPredicted RBP11.86□□□□□ -0.51
LINC02541-201ENST00000427157 CHRM1P11229 460 aaPredicted RBP11.85□□□□□ -0.51
LINC02541-201ENST00000427157 OTUD5Q96G74 571 aa11.85□□□□□ -0.51
LINC02541-201ENST00000427157 POTEJP0CG39 1038 aa11.83□□□□□ -0.52
LINC02541-201ENST00000427157 ZNF467Q7Z7K2 595 aaPredicted RBP11.82□□□□□ -0.52
LINC02541-201ENST00000427157 IER5LQ5T953 404 aa11.81□□□□□ -0.52
LINC02541-201ENST00000427157 COLQQ9Y215 455 aaPredicted RBP11.81□□□□□ -0.52
LINC02541-201ENST00000427157 SEC24BO95487 1268 aa11.78□□□□□ -0.52
LINC02541-201ENST00000427157 PSEN1P49768 467 aa11.72□□□□□ -0.53
LINC02541-201ENST00000427157 MAMSTRQ6ZN01 415 aa11.72□□□□□ -0.53
LINC02541-201ENST00000427157 IRX5P78411 483 aaPredicted RBP11.71□□□□□ -0.53
LINC02541-201ENST00000427157 PDAP1Q13442 181 aaKnown RBP11.7□□□□□ -0.54
LINC02541-201ENST00000427157 TRIM41Q8WV44 630 aa11.7□□□□□ -0.54
LINC02541-201ENST00000427157 PLCG2P16885 1265 aa11.69□□□□□ -0.54
LINC02541-201ENST00000427157 SCUBE2Q9NQ36 999 aa11.69□□□□□ -0.54
LINC02541-201ENST00000427157 GOLGA2Q08379 1002 aa11.64□□□□□ -0.55
LINC02541-201ENST00000427157 OCEL1Q9H607 264 aa11.64□□□□□ -0.55
LINC02541-201ENST00000427157 MKRN3Q13064 507 aaKnown RBP11.61□□□□□ -0.55
LINC02541-201ENST00000427157 RNF25Q96BH1 459 aaPredicted RBP11.61□□□□□ -0.55
LINC02541-201ENST00000427157 PDCD7Q8N8D1 485 aaKnown RBP11.59□□□□□ -0.55
LINC02541-201ENST00000427157 CABP2Q9NPB3 220 aa11.59□□□□□ -0.55
LINC02541-201ENST00000427157 RIOK3O14730 519 aaKnown RBP11.56□□□□□ -0.56
LINC02541-201ENST00000427157 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.56□□□□□ -0.56
LINC02541-201ENST00000427157 ILDR1Q86SU0 546 aaPredicted RBP11.52□□□□□ -0.57
LINC02541-201ENST00000427157 SLAIN1Q8ND83 568 aa11.5□□□□□ -0.57
LINC02541-201ENST00000427157 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.49□□□□□ -0.57
LINC02541-201ENST00000427157 VGFO15240 615 aaPredicted RBP11.49□□□□□ -0.57
LINC02541-201ENST00000427157 ZFP91Q96JP5 570 aaPredicted RBP11.49□□□□□ -0.57
LINC02541-201ENST00000427157 PKD2Q13563 968 aa11.48□□□□□ -0.57
LINC02541-201ENST00000427157 EFCAB3Q8N7B9 438 aa11.47□□□□□ -0.57
LINC02541-201ENST00000427157 ECM2O94769 699 aaPredicted RBP11.46□□□□□ -0.57
LINC02541-201ENST00000427157 LCE2DQ5TA82 110 aaPredicted RBP11.46□□□□□ -0.57
LINC02541-201ENST00000427157 DPY19L2Q6NUT2 758 aa11.45□□□□□ -0.58
LINC02541-201ENST00000427157 L3MBTL3Q96JM7 780 aaPredicted RBP11.45□□□□□ -0.58
LINC02541-201ENST00000427157 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.45□□□□□ -0.58
LINC02541-201ENST00000427157 FAM163AQ96GL9 167 aaPredicted RBP11.44□□□□□ -0.58
LINC02541-201ENST00000427157 POTEMA6NI47 508 aa11.42□□□□□ -0.58
LINC02541-201ENST00000427157 C3orf67Q6ZVT6 689 aa11.42□□□□□ -0.58
LINC02541-201ENST00000427157 POTEGQ6S5H5 508 aa11.41□□□□□ -0.58
LINC02541-201ENST00000427157 RGL2O15211 777 aa11.39□□□□□ -0.59
LINC02541-201ENST00000427157 BCL11BQ9C0K0 894 aaPredicted RBP11.38□□□□□ -0.59
LINC02541-201ENST00000427157 TAOK2Q9UL54 1235 aa11.38□□□□□ -0.59
LINC02541-201ENST00000427157 BOLA1Q9Y3E2 137 aa11.37□□□□□ -0.59
LINC02541-201ENST00000427157 SOX12O15370 315 aa11.35□□□□□ -0.59
LINC02541-201ENST00000427157 G3V3G9 751 aa11.34□□□□□ -0.59
LINC02541-201ENST00000427157 PHF8Q9UPP1 1060 aa11.34□□□□□ -0.59
LINC02541-201ENST00000427157 STK24Q9Y6E0 443 aa11.34□□□□□ -0.59
LINC02541-201ENST00000427157 STK25O00506 426 aa11.33□□□□□ -0.6
LINC02541-201ENST00000427157 MS4A4AQ96JQ5 239 aa11.33□□□□□ -0.6
LINC02541-201ENST00000427157 ST18O60284 1047 aa11.3□□□□□ -0.6
LINC02541-201ENST00000427157 TMEM121BQ9BXQ6 578 aaPredicted RBP11.3□□□□□ -0.6
LINC02541-201ENST00000427157 SNPHO15079 494 aa11.27□□□□□ -0.61
LINC02541-201ENST00000427157 MICALL2Q8IY33 904 aa11.27□□□□□ -0.61
LINC02541-201ENST00000427157 FBXO22Q8NEZ5 403 aa11.26□□□□□ -0.61
LINC02541-201ENST00000427157 NLRP6P59044 892 aa11.25□□□□□ -0.61
LINC02541-201ENST00000427157 MFRPQ9BY79 579 aa11.25□□□□□ -0.61
LINC02541-201ENST00000427157 TMEM92Q6UXU6 159 aa11.19□□□□□ -0.62
LINC02541-201ENST00000427157 PCDH10Q9P2E7 1040 aa11.19□□□□□ -0.62
LINC02541-201ENST00000427157 HOXB3P14651 431 aaPredicted RBP11.16□□□□□ -0.62
LINC02541-201ENST00000427157 MARVELD3Q96A59 401 aa11.16□□□□□ -0.62
LINC02541-201ENST00000427157 PLSCR2Q9NRY7 297 aa11.16□□□□□ -0.62
LINC02541-201ENST00000427157 HS6ST3Q8IZP7 471 aa11.15□□□□□ -0.62
LINC02541-201ENST00000427157 CDAN1Q8IWY9 1227 aa11.12□□□□□ -0.63
LINC02541-201ENST00000427157 CHGAP10645 457 aaKnown RBP11.1□□□□□ -0.63
LINC02541-201ENST00000427157 EMP3P54852 163 aa11.09□□□□□ -0.63
LINC02541-201ENST00000427157 DOK7Q18PE1 504 aa11.08□□□□□ -0.64
LINC02541-201ENST00000427157 ZNF710Q8N1W2 664 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms