RNA–Protein interactions for RNA: ENST00000426635.6

LINC00472-203, long intergenic non-protein coding RNA 472, humanhuman

TSL 2 BASIC

Gene LINC00472, Length 2,958 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-203ENST00000426635 WDR97A6NE52 1622 aa23.55■■□□□ 1.36
LINC00472-203ENST00000426635 KANK4Q5T7N3 995 aaPredicted RBP23.55■■□□□ 1.36
LINC00472-203ENST00000426635 KIF21BO75037 1637 aa23.51■■□□□ 1.35
LINC00472-203ENST00000426635 SIN3AQ96ST3 1273 aa23.5■■□□□ 1.35
LINC00472-203ENST00000426635 MAPKBP1O60336 1514 aa23.46■■□□□ 1.35
LINC00472-203ENST00000426635 RAB3GAP2Q9H2M9 1393 aa23.42■■□□□ 1.34
LINC00472-203ENST00000426635 CUX2O14529 1486 aa23.42■■□□□ 1.34
LINC00472-203ENST00000426635 RAPGEF2Q9Y4G8 1499 aa23.42■■□□□ 1.34
LINC00472-203ENST00000426635 SMARCA2P51531 1590 aa23.41■■□□□ 1.34
LINC00472-203ENST00000426635 RRBP1Q9P2E9 1410 aaKnown RBP23.41■■□□□ 1.34
LINC00472-203ENST00000426635 TOP2AP11388 1531 aaKnown RBP23.41■■□□□ 1.34
LINC00472-203ENST00000426635 ZBTB47Q9UFB7 747 aaPredicted RBP23.4■■□□□ 1.34
LINC00472-203ENST00000426635 ANP32AP39687 249 aaKnown RBP23.39■■□□□ 1.34
LINC00472-203ENST00000426635 IPO9Q96P70 1041 aaKnown RBP23.39■■□□□ 1.33
LINC00472-203ENST00000426635 CCNB3Q8WWL7 1395 aa23.36■■□□□ 1.33
LINC00472-203ENST00000426635 BAZ1BQ9UIG0 1483 aaKnown RBP23.36■■□□□ 1.33
LINC00472-203ENST00000426635 EIF5BO60841 1220 aaKnown RBP23.35■■□□□ 1.33
LINC00472-203ENST00000426635 WASHC2AQ641Q2 1341 aa23.24■■□□□ 1.31
LINC00472-203ENST00000426635 ARAP1Q96P48 1450 aa23.21■■□□□ 1.31
LINC00472-203ENST00000426635 NEFMP07197 916 aa23.21■■□□□ 1.31
LINC00472-203ENST00000426635 LAS1LQ9Y4W2 734 aaKnown RBP23.21■■□□□ 1.31
LINC00472-203ENST00000426635 SYNJ1O43426 1573 aa23.19■■□□□ 1.3
LINC00472-203ENST00000426635 SETD5Q9C0A6 1442 aa23.18■■□□□ 1.3
LINC00472-203ENST00000426635 BRPF3Q9ULD4 1205 aa23.17■■□□□ 1.3
LINC00472-203ENST00000426635 TIMELESSQ9UNS1 1208 aa23.15■■□□□ 1.3
LINC00472-203ENST00000426635 NPM2Q86SE8 214 aaKnown RBP23.15■■□□□ 1.3
LINC00472-203ENST00000426635 CCDC184Q52MB2 194 aa23.14■■□□□ 1.29
LINC00472-203ENST00000426635 FAM9BQ8IZU0 186 aa23.13■■□□□ 1.29
LINC00472-203ENST00000426635 C11orf95C9JLR9 678 aaPredicted RBP23.13■■□□□ 1.29
LINC00472-203ENST00000426635 WASHC2CQ9Y4E1 1318 aa23.09■■□□□ 1.29
LINC00472-203ENST00000426635 PKNOX2Q96KN3 472 aa23.07■■□□□ 1.28
LINC00472-203ENST00000426635 USP35Q9P2H5 1018 aa23.06■■□□□ 1.28
LINC00472-203ENST00000426635 FAM50AQ14320 339 aaKnown RBP23.04■■□□□ 1.28
LINC00472-203ENST00000426635 SMARCA4P51532 1647 aa23.03■■□□□ 1.28
LINC00472-203ENST00000426635 TONSLQ96HA7 1378 aa23.03■■□□□ 1.28
LINC00472-203ENST00000426635 ZBED9Q6R2W3 1325 aa23■■□□□ 1.27
LINC00472-203ENST00000426635 MRS2Q9HD23 443 aa22.97■■□□□ 1.27
LINC00472-203ENST00000426635 AKNAQ7Z591 1439 aa22.97■■□□□ 1.27
LINC00472-203ENST00000426635 GSE1Q14687 1217 aa22.94■■□□□ 1.26
LINC00472-203ENST00000426635 PPM1GO15355 546 aaPredicted RBP22.93■■□□□ 1.26
LINC00472-203ENST00000426635 RSPH6AQ9H0K4 717 aa22.86■■□□□ 1.25
LINC00472-203ENST00000426635 PRKRIP1Q9H875 184 aaPredicted RBP22.86■■□□□ 1.25
LINC00472-203ENST00000426635 HSPA5P11021 654 aaKnown RBP22.85■■□□□ 1.25
LINC00472-203ENST00000426635 FRAT1Q92837 279 aaPredicted RBP22.84■■□□□ 1.25
LINC00472-203ENST00000426635 ERICH3Q5RHP9 1530 aa22.84■■□□□ 1.25
LINC00472-203ENST00000426635 NCAPD3P42695 1498 aa22.84■■□□□ 1.25
LINC00472-203ENST00000426635 PHLDB1Q86UU1 1377 aa22.83■■□□□ 1.25
LINC00472-203ENST00000426635 SENP3-EIF4A1A0A087X0R7 540 aa22.83■■□□□ 1.25
LINC00472-203ENST00000426635 PRXQ9BXM0 1461 aa22.82■■□□□ 1.24
LINC00472-203ENST00000426635 PEG3Q9GZU2 1588 aa22.82■■□□□ 1.24
LINC00472-203ENST00000426635 PDE4AP27815 886 aa22.81■■□□□ 1.24
LINC00472-203ENST00000426635 FHAD1B1AJZ9 1412 aa22.81■■□□□ 1.24
LINC00472-203ENST00000426635 ARHGAP35Q9NRY4 1499 aa22.8■■□□□ 1.24
LINC00472-203ENST00000426635 NUDCQ9Y266 331 aa22.78■■□□□ 1.24
LINC00472-203ENST00000426635 SMG6Q86US8 1419 aaKnown RBP22.78■■□□□ 1.24
LINC00472-203ENST00000426635 CNTLNQ9NXG0 1405 aa22.78■■□□□ 1.24
LINC00472-203ENST00000426635 NFKBIBQ15653 356 aa22.77■■□□□ 1.24
LINC00472-203ENST00000426635 RNF123Q5XPI4 1314 aa22.75■■□□□ 1.23
LINC00472-203ENST00000426635 CNGB1Q14028 1251 aaPredicted RBP22.74■■□□□ 1.23
LINC00472-203ENST00000426635 TCERG1O14776 1098 aaKnown RBP22.74■■□□□ 1.23
LINC00472-203ENST00000426635 BACH2Q9BYV9 841 aa22.73■■□□□ 1.23
LINC00472-203ENST00000426635 TIAM1Q13009 1591 aa22.73■■□□□ 1.23
LINC00472-203ENST00000426635 FAM43AQ8N2R8 423 aa22.71■■□□□ 1.23
LINC00472-203ENST00000426635 GLIPR1L2Q4G1C9 344 aa22.71■■□□□ 1.23
LINC00472-203ENST00000426635 EIF4G2P78344 907 aaKnown RBP eCLIP22.7■■□□□ 1.22
LINC00472-203ENST00000426635 VSIG10Q8N0Z9 540 aa22.7■■□□□ 1.22
LINC00472-203ENST00000426635 SLC4A3P48751 1232 aa22.69■■□□□ 1.22
LINC00472-203ENST00000426635 LRRC9Q6ZRR7 1453 aa22.69■■□□□ 1.22
LINC00472-203ENST00000426635 ZMYND15Q9H091 742 aa22.68■■□□□ 1.22
LINC00472-203ENST00000426635 NCOA2Q15596 1464 aa22.68■■□□□ 1.22
LINC00472-203ENST00000426635 DCAF11Q8TEB1 546 aa22.65■■□□□ 1.22
LINC00472-203ENST00000426635 ATP1B4Q9UN42 357 aaPredicted RBP22.65■■□□□ 1.22
LINC00472-203ENST00000426635 EXOC6Q8TAG9 804 aa22.63■■□□□ 1.21
LINC00472-203ENST00000426635 DDRGK1Q96HY6 314 aa22.63■■□□□ 1.21
LINC00472-203ENST00000426635 TOP2BQ02880 1626 aa22.62■■□□□ 1.21
LINC00472-203ENST00000426635 KDM5BQ9UGL1 1544 aa22.61■■□□□ 1.21
LINC00472-203ENST00000426635 UNC13AQ9UPW8 1703 aa22.6■■□□□ 1.21
LINC00472-203ENST00000426635 CCDC7Q96M83 1385 aa22.6■■□□□ 1.21
LINC00472-203ENST00000426635 CCDC18Q5T9S5 1454 aa22.59■■□□□ 1.21
LINC00472-203ENST00000426635 DAXXQ9UER7 740 aaPredicted RBP22.59■■□□□ 1.21
LINC00472-203ENST00000426635 MS4A1P11836 297 aa22.58■■□□□ 1.2
LINC00472-203ENST00000426635 SKAP1Q86WV1 359 aa22.56■■□□□ 1.2
LINC00472-203ENST00000426635 MAP3K1Q13233 1512 aa22.56■■□□□ 1.2
LINC00472-203ENST00000426635 UACAQ9BZF9 1416 aa22.55■■□□□ 1.2
LINC00472-203ENST00000426635 FRAT2O75474 233 aaPredicted RBP22.55■■□□□ 1.2
LINC00472-203ENST00000426635 NCOA1Q15788 1441 aa22.52■■□□□ 1.2
LINC00472-203ENST00000426635 RRP1P56182 461 aaKnown RBP22.51■■□□□ 1.19
LINC00472-203ENST00000426635 RRAGDQ9NQL2 400 aaPredicted RBP22.5■■□□□ 1.19
LINC00472-203ENST00000426635 AQRO60306 1485 aaKnown RBP eCLIP22.48■■□□□ 1.19
LINC00472-203ENST00000426635 PLEKHG5O94827 1062 aa22.47■■□□□ 1.19
LINC00472-203ENST00000426635 P3H3Q8IVL6 736 aa22.47■■□□□ 1.19
LINC00472-203ENST00000426635 KIF27Q86VH2 1401 aa22.46■■□□□ 1.19
LINC00472-203ENST00000426635 KIF7Q2M1P5 1343 aa22.46■■□□□ 1.19
LINC00472-203ENST00000426635 PODXL2Q9NZ53 605 aa22.45■■□□□ 1.18
LINC00472-203ENST00000426635 BIVM-ERCC5R4GMW8 1640 aa22.44■■□□□ 1.18
LINC00472-203ENST00000426635 HSP90AA2PQ14568 343 aaPredicted RBP22.43■■□□□ 1.18
LINC00472-203ENST00000426635 NAP1L5Q96NT1 182 aaPredicted RBP22.43■■□□□ 1.18
LINC00472-203ENST00000426635 POLR3GLQ9BT43 218 aa22.43■■□□□ 1.18
LINC00472-203ENST00000426635 L3MBTL2Q969R5 705 aa22.41■■□□□ 1.18
LINC00472-203ENST00000426635 BICRAQ9NZM4 1560 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms