RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 ATMINO43313 823 aaPredicted RBP11.7□□□□□ -0.54
R3HDM1-205ENST00000425804 MAMSTRQ6ZN01 415 aa11.7□□□□□ -0.54
R3HDM1-205ENST00000425804 MS4A3Q96HJ5 214 aa11.69□□□□□ -0.54
R3HDM1-205ENST00000425804 NPM1P06748 294 aaKnown RBP eCLIP11.68□□□□□ -0.54
R3HDM1-205ENST00000425804 FAM163AQ96GL9 167 aaPredicted RBP11.68□□□□□ -0.54
R3HDM1-205ENST00000425804 MNX1P50219 401 aaPredicted RBP11.66□□□□□ -0.54
R3HDM1-205ENST00000425804 SCUBE2Q9NQ36 999 aa11.62□□□□□ -0.55
R3HDM1-205ENST00000425804 ATN1P54259 1190 aaPredicted RBP11.56□□□□□ -0.56
R3HDM1-205ENST00000425804 SPDYE4A6NLX3 237 aa11.55□□□□□ -0.56
R3HDM1-205ENST00000425804 POTEFA5A3E0 1075 aa11.51□□□□□ -0.57
R3HDM1-205ENST00000425804 TSPYL2Q9H2G4 693 aaPredicted RBP11.48□□□□□ -0.57
R3HDM1-205ENST00000425804 CDAN1Q8IWY9 1227 aa11.47□□□□□ -0.57
R3HDM1-205ENST00000425804 BMP2KQ9NSY1 1161 aaPredicted RBP11.45□□□□□ -0.58
R3HDM1-205ENST00000425804 CCDC61Q9Y6R9 512 aa11.45□□□□□ -0.58
R3HDM1-205ENST00000425804 KIF12Q96FN5 646 aa11.42□□□□□ -0.58
R3HDM1-205ENST00000425804 TRPC6Q9Y210 931 aa11.42□□□□□ -0.58
R3HDM1-205ENST00000425804 COLQQ9Y215 455 aaPredicted RBP11.37□□□□□ -0.59
R3HDM1-205ENST00000425804 TIE1P35590 1138 aa11.35□□□□□ -0.59
R3HDM1-205ENST00000425804 SEC24BO95487 1268 aa11.34□□□□□ -0.59
R3HDM1-205ENST00000425804 CSRNP3Q8WYN3 585 aa11.34□□□□□ -0.59
R3HDM1-205ENST00000425804 MAP3K13O43283 966 aa11.33□□□□□ -0.6
R3HDM1-205ENST00000425804 TTLL13PA6NNM8 815 aa11.29□□□□□ -0.6
R3HDM1-205ENST00000425804 ST18O60284 1047 aa11.29□□□□□ -0.6
R3HDM1-205ENST00000425804 SLAIN1Q8ND83 568 aa11.25□□□□□ -0.61
R3HDM1-205ENST00000425804 MMRN1Q13201 1228 aa11.24□□□□□ -0.61
R3HDM1-205ENST00000425804 IER5LQ5T953 404 aa11.23□□□□□ -0.61
R3HDM1-205ENST00000425804 TRIM35Q9UPQ4 493 aa11.23□□□□□ -0.61
R3HDM1-205ENST00000425804 RASEFQ8IZ41 740 aa11.21□□□□□ -0.61
R3HDM1-205ENST00000425804 SPNS2Q8IVW8 549 aa11.2□□□□□ -0.62
R3HDM1-205ENST00000425804 PROM2Q8N271 834 aa11.16□□□□□ -0.62
R3HDM1-205ENST00000425804 PCDHB13Q9Y5F0 798 aa11.13□□□□□ -0.63
R3HDM1-205ENST00000425804 PLEKHG5O94827 1062 aa11.11□□□□□ -0.63
R3HDM1-205ENST00000425804 SGIP1Q9BQI5 828 aa11.11□□□□□ -0.63
R3HDM1-205ENST00000425804 TMEM121BQ9BXQ6 578 aaPredicted RBP11.1□□□□□ -0.63
R3HDM1-205ENST00000425804 PLCG2P16885 1265 aa11.09□□□□□ -0.63
R3HDM1-205ENST00000425804 MIER1Q8N108 512 aa11.09□□□□□ -0.63
R3HDM1-205ENST00000425804 IFNL1Q8IU54 200 aa11.05□□□□□ -0.64
R3HDM1-205ENST00000425804 MARVELD3Q96A59 401 aa11.05□□□□□ -0.64
R3HDM1-205ENST00000425804 TMEM106CQ9BVX2 250 aa11.05□□□□□ -0.64
R3HDM1-205ENST00000425804 IRX5P78411 483 aaPredicted RBP11.03□□□□□ -0.64
R3HDM1-205ENST00000425804 SNPHO15079 494 aa11.01□□□□□ -0.65
R3HDM1-205ENST00000425804 OCEL1Q9H607 264 aa10.96□□□□□ -0.65
R3HDM1-205ENST00000425804 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.96□□□□□ -0.65
R3HDM1-205ENST00000425804 NUBP1P53384 320 aa10.94□□□□□ -0.66
R3HDM1-205ENST00000425804 PLCD3Q8N3E9 789 aa10.92□□□□□ -0.66
R3HDM1-205ENST00000425804 EMP3P54852 163 aa10.91□□□□□ -0.66
R3HDM1-205ENST00000425804 KRTAP3-3Q9BYR6 98 aa10.89□□□□□ -0.67
R3HDM1-205ENST00000425804 KRTAP3-2Q9BYR7 98 aa10.89□□□□□ -0.67
R3HDM1-205ENST00000425804 EHMT2Q96KQ7 1210 aa10.88□□□□□ -0.67
R3HDM1-205ENST00000425804 FAM212AQ96EL1 285 aa10.87□□□□□ -0.67
R3HDM1-205ENST00000425804 POTEB3A0JP26 581 aa10.86□□□□□ -0.67
R3HDM1-205ENST00000425804 POTEBQ6S5H4 581 aa10.86□□□□□ -0.67
R3HDM1-205ENST00000425804 ZBTB47Q9UFB7 747 aaPredicted RBP10.86□□□□□ -0.67
R3HDM1-205ENST00000425804 HS3ST6Q96QI5 342 aa10.85□□□□□ -0.67
R3HDM1-205ENST00000425804 FAM205CA6NFA0 338 aa10.82□□□□□ -0.68
R3HDM1-205ENST00000425804 C3orf67Q6ZVT6 689 aa10.8□□□□□ -0.68
R3HDM1-205ENST00000425804 PDCD7Q8N8D1 485 aaKnown RBP10.78□□□□□ -0.68
R3HDM1-205ENST00000425804 PYGBP11216 843 aa10.76□□□□□ -0.69
R3HDM1-205ENST00000425804 PCDHB8Q9UN66 801 aa10.76□□□□□ -0.69
R3HDM1-205ENST00000425804 L3MBTL3Q96JM7 780 aaPredicted RBP10.72□□□□□ -0.69
R3HDM1-205ENST00000425804 DCAF8Q5TAQ9 597 aa10.7□□□□□ -0.7
R3HDM1-205ENST00000425804 MKRN3Q13064 507 aaKnown RBP10.66□□□□□ -0.7
R3HDM1-205ENST00000425804 GOLGA2Q08379 1002 aa10.65□□□□□ -0.7
R3HDM1-205ENST00000425804 RNF166Q96A37 237 aaPredicted RBP10.64□□□□□ -0.71
R3HDM1-205ENST00000425804 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.63□□□□□ -0.713e-6■■■□□ 15.8
R3HDM1-205ENST00000425804 HOXB3P14651 431 aaPredicted RBP10.6□□□□□ -0.71
R3HDM1-205ENST00000425804 HOXB1P14653 301 aaPredicted RBP10.57□□□□□ -0.72
R3HDM1-205ENST00000425804 ZNF467Q7Z7K2 595 aaPredicted RBP10.57□□□□□ -0.72
R3HDM1-205ENST00000425804 ERBB3P21860 1342 aa10.56□□□□□ -0.72
R3HDM1-205ENST00000425804 DPY19L2Q6NUT2 758 aa10.55□□□□□ -0.72
R3HDM1-205ENST00000425804 ILDR1Q86SU0 546 aaPredicted RBP10.54□□□□□ -0.72
R3HDM1-205ENST00000425804 ZNF710Q8N1W2 664 aa10.54□□□□□ -0.72
R3HDM1-205ENST00000425804 MYT1LQ9UL68 1186 aa10.54□□□□□ -0.72
R3HDM1-205ENST00000425804 PSEN1P49768 467 aa10.51□□□□□ -0.73
R3HDM1-205ENST00000425804 DOK7Q18PE1 504 aa10.49□□□□□ -0.73
R3HDM1-205ENST00000425804 BOLA1Q9Y3E2 137 aa10.49□□□□□ -0.73
R3HDM1-205ENST00000425804 G3V3G9 751 aa10.48□□□□□ -0.73
R3HDM1-205ENST00000425804 VARS2Q5ST30 1063 aaKnown RBP10.48□□□□□ -0.73
R3HDM1-205ENST00000425804 GSE1Q14687 1217 aa10.45□□□□□ -0.74
R3HDM1-205ENST00000425804 CHRM1P11229 460 aaPredicted RBP10.43□□□□□ -0.74
R3HDM1-205ENST00000425804 RIMBP2O15034 1052 aa10.41□□□□□ -0.74
R3HDM1-205ENST00000425804 ZNF687Q8N1G0 1237 aa10.4□□□□□ -0.74
R3HDM1-205ENST00000425804 CABP2Q9NPB3 220 aa10.4□□□□□ -0.74
R3HDM1-205ENST00000425804 PDAP1Q13442 181 aaKnown RBP10.39□□□□□ -0.75
R3HDM1-205ENST00000425804 PTGER2P43116 358 aa10.38□□□□□ -0.75
R3HDM1-205ENST00000425804 FKBP8Q14318 412 aa10.34□□□□□ -0.75
R3HDM1-205ENST00000425804 KLHL34Q8N239 644 aa10.33□□□□□ -0.76
R3HDM1-205ENST00000425804 ZSWIM6Q9HCJ5 1215 aa10.33□□□□□ -0.76
R3HDM1-205ENST00000425804 ANKRD13DQ6ZTN6 518 aa10.31□□□□□ -0.76
R3HDM1-205ENST00000425804 GPR153Q6NV75 609 aa10.3□□□□□ -0.76
R3HDM1-205ENST00000425804 FBXO3Q9UK99 471 aa10.29□□□□□ -0.76
R3HDM1-205ENST00000425804 TMEM92Q6UXU6 159 aa10.27□□□□□ -0.77
R3HDM1-205ENST00000425804 PLA2G2EQ9NZK7 142 aa10.24□□□□□ -0.77
R3HDM1-205ENST00000425804 LSM11P83369 360 aaKnown RBP eCLIP10.22□□□□□ -0.77
R3HDM1-205ENST00000425804 MICALL2Q8IY33 904 aa10.22□□□□□ -0.77
R3HDM1-205ENST00000425804 VASPP50552 380 aaPredicted RBP10.21□□□□□ -0.77
R3HDM1-205ENST00000425804 ARSIQ5FYB1 569 aa10.21□□□□□ -0.77
R3HDM1-205ENST00000425804 EFCAB3Q8N7B9 438 aa10.2□□□□□ -0.78
R3HDM1-205ENST00000425804 ZNF316A6NFI3 1004 aaPredicted RBP10.17□□□□□ -0.78
R3HDM1-205ENST00000425804 KHSRPQ92945 711 aaKnown RBP eCLIP10.16□□□□□ -0.788e-8■■■■□ 25.7
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms