RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 ZBTB47Q9UFB7 747 aaPredicted RBP16.19■□□□□ 0.18
RAB3GAP1-202ENST00000425393 CCDC61Q9Y6R9 512 aa16.18■□□□□ 0.18
RAB3GAP1-202ENST00000425393 NUBP1P53384 320 aa16.1■□□□□ 0.17
RAB3GAP1-202ENST00000425393 MS4A3Q96HJ5 214 aa16.1■□□□□ 0.17
RAB3GAP1-202ENST00000425393 VASPP50552 380 aaPredicted RBP16.07■□□□□ 0.16
RAB3GAP1-202ENST00000425393 KIF12Q96FN5 646 aa16.04■□□□□ 0.16
RAB3GAP1-202ENST00000425393 FAM212AQ96EL1 285 aa15.97■□□□□ 0.15
RAB3GAP1-202ENST00000425393 MAP3K13O43283 966 aa15.96■□□□□ 0.15
RAB3GAP1-202ENST00000425393 ASTLQ6HA08 431 aaPredicted RBP15.93■□□□□ 0.14
RAB3GAP1-202ENST00000425393 KLHL34Q8N239 644 aa15.9■□□□□ 0.14
RAB3GAP1-202ENST00000425393 ATMINO43313 823 aaPredicted RBP15.89■□□□□ 0.13
RAB3GAP1-202ENST00000425393 PELP1Q8IZL8 1130 aaKnown RBP15.89■□□□□ 0.13
RAB3GAP1-202ENST00000425393 SLC39A7Q92504 469 aa15.89■□□□□ 0.13
RAB3GAP1-202ENST00000425393 TRPC6Q9Y210 931 aa15.87■□□□□ 0.13
RAB3GAP1-202ENST00000425393 C7P10643 843 aa15.86■□□□□ 0.13
RAB3GAP1-202ENST00000425393 METRNQ9UJH8 293 aa15.85■□□□□ 0.13
RAB3GAP1-202ENST00000425393 SGIP1Q9BQI5 828 aa15.84■□□□□ 0.13
RAB3GAP1-202ENST00000425393 DCAF8Q5TAQ9 597 aa15.83■□□□□ 0.12
RAB3GAP1-202ENST00000425393 PCDHB13Q9Y5F0 798 aa15.83■□□□□ 0.12
RAB3GAP1-202ENST00000425393 BMP2KQ9NSY1 1161 aaPredicted RBP15.82■□□□□ 0.12
RAB3GAP1-202ENST00000425393 IFNLR1Q8IU57 520 aaPredicted RBP15.81■□□□□ 0.12
RAB3GAP1-202ENST00000425393 ATN1P54259 1190 aaPredicted RBP15.8■□□□□ 0.12
RAB3GAP1-202ENST00000425393 TIE1P35590 1138 aa15.79■□□□□ 0.12
RAB3GAP1-202ENST00000425393 OTUD5Q96G74 571 aa15.79■□□□□ 0.12
RAB3GAP1-202ENST00000425393 POTEB2H3BUK9 544 aa15.77■□□□□ 0.12
RAB3GAP1-202ENST00000425393 IFNL1Q8IU54 200 aa15.77■□□□□ 0.12
RAB3GAP1-202ENST00000425393 PYGBP11216 843 aa15.75■□□□□ 0.11
RAB3GAP1-202ENST00000425393 MAMSTRQ6ZN01 415 aa15.73■□□□□ 0.11
RAB3GAP1-202ENST00000425393 TTLL13PA6NNM8 815 aa15.72■□□□□ 0.11
RAB3GAP1-202ENST00000425393 GSE1Q14687 1217 aa15.72■□□□□ 0.11
RAB3GAP1-202ENST00000425393 SPOCK2Q92563 424 aa15.7■□□□□ 0.1
RAB3GAP1-202ENST00000425393 SCUBE2Q9NQ36 999 aa15.62■□□□□ 0.09
RAB3GAP1-202ENST00000425393 TRIM35Q9UPQ4 493 aa15.62■□□□□ 0.09
RAB3GAP1-202ENST00000425393 TMEM106CQ9BVX2 250 aa15.6■□□□□ 0.09
RAB3GAP1-202ENST00000425393 PCDHB8Q9UN66 801 aa15.6■□□□□ 0.09
RAB3GAP1-202ENST00000425393 POTEFA5A3E0 1075 aa15.58■□□□□ 0.08
RAB3GAP1-202ENST00000425393 SEC24BO95487 1268 aa15.57■□□□□ 0.08
RAB3GAP1-202ENST00000425393 CHRM1P11229 460 aaPredicted RBP15.57■□□□□ 0.08
RAB3GAP1-202ENST00000425393 CIZ1Q9ULV3 898 aaPredicted RBP15.56■□□□□ 0.08
RAB3GAP1-202ENST00000425393 POTEJP0CG39 1038 aa15.54■□□□□ 0.08
RAB3GAP1-202ENST00000425393 IER5LQ5T953 404 aa15.53■□□□□ 0.08
RAB3GAP1-202ENST00000425393 ZNF467Q7Z7K2 595 aaPredicted RBP15.53■□□□□ 0.08
RAB3GAP1-202ENST00000425393 COLQQ9Y215 455 aaPredicted RBP15.51■□□□□ 0.07
RAB3GAP1-202ENST00000425393 POTEMA6NI47 508 aa15.45■□□□□ 0.06
RAB3GAP1-202ENST00000425393 PLSCR2Q9NRY7 297 aa15.42■□□□□ 0.06
RAB3GAP1-202ENST00000425393 POTEGQ6S5H5 508 aa15.4■□□□□ 0.06
RAB3GAP1-202ENST00000425393 IRX5P78411 483 aaPredicted RBP15.39■□□□□ 0.05
RAB3GAP1-202ENST00000425393 PSEN1P49768 467 aa15.38■□□□□ 0.05
RAB3GAP1-202ENST00000425393 PLCG2P16885 1265 aa15.37■□□□□ 0.05
RAB3GAP1-202ENST00000425393 TRIM41Q8WV44 630 aa15.37■□□□□ 0.05
RAB3GAP1-202ENST00000425393 PDAP1Q13442 181 aaKnown RBP15.35■□□□□ 0.05
RAB3GAP1-202ENST00000425393 FAM163AQ96GL9 167 aaPredicted RBP15.33■□□□□ 0.04
RAB3GAP1-202ENST00000425393 PCDH10Q9P2E7 1040 aa15.32■□□□□ 0.04
RAB3GAP1-202ENST00000425393 OCEL1Q9H607 264 aa15.3■□□□□ 0.04
RAB3GAP1-202ENST00000425393 GOLGA2Q08379 1002 aa15.29■□□□□ 0.04
RAB3GAP1-202ENST00000425393 MKRN3Q13064 507 aaKnown RBP15.26■□□□□ 0.03
RAB3GAP1-202ENST00000425393 PDCD7Q8N8D1 485 aaKnown RBP15.22■□□□□ 0.03
RAB3GAP1-202ENST00000425393 RNF25Q96BH1 459 aaPredicted RBP15.22■□□□□ 0.03
RAB3GAP1-202ENST00000425393 SLAIN1Q8ND83 568 aa15.21■□□□□ 0.03
RAB3GAP1-202ENST00000425393 CABP2Q9NPB3 220 aa15.21■□□□□ 0.03
RAB3GAP1-202ENST00000425393 RIOK3O14730 519 aaKnown RBP15.17■□□□□ 0.02
RAB3GAP1-202ENST00000425393 LCE2DQ5TA82 110 aaPredicted RBP15.17■□□□□ 0.02
RAB3GAP1-202ENST00000425393 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.16■□□□□ 0.023e-6■□□□□ 9.9
RAB3GAP1-202ENST00000425393 ILDR1Q86SU0 546 aaPredicted RBP15.14■□□□□ 0.01
RAB3GAP1-202ENST00000425393 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.1■□□□□ 0.01
RAB3GAP1-202ENST00000425393 VGFO15240 615 aaPredicted RBP15.09■□□□□ 0.01
RAB3GAP1-202ENST00000425393 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.07■□□□□ 0
RAB3GAP1-202ENST00000425393 ZFP91Q96JP5 570 aaPredicted RBP15.07■□□□□ 0
RAB3GAP1-202ENST00000425393 SNPHO15079 494 aa15.05■□□□□ -0
RAB3GAP1-202ENST00000425393 EFCAB3Q8N7B9 438 aa15.05■□□□□ -0
RAB3GAP1-202ENST00000425393 L3MBTL3Q96JM7 780 aaPredicted RBP15.05■□□□□ -0
RAB3GAP1-202ENST00000425393 PKD2Q13563 968 aa15.04■□□□□ -0
RAB3GAP1-202ENST00000425393 ECM2O94769 699 aaPredicted RBP15.03■□□□□ -0
RAB3GAP1-202ENST00000425393 DPY19L2Q6NUT2 758 aa15.03■□□□□ -0
RAB3GAP1-202ENST00000425393 C3orf67Q6ZVT6 689 aa15.02■□□□□ -0
RAB3GAP1-202ENST00000425393 ST18O60284 1047 aa14.99□□□□□ -0.01
RAB3GAP1-202ENST00000425393 TMEM121BQ9BXQ6 578 aaPredicted RBP14.96□□□□□ -0.01
RAB3GAP1-202ENST00000425393 TAOK2Q9UL54 1235 aa14.95□□□□□ -0.02
RAB3GAP1-202ENST00000425393 CDAN1Q8IWY9 1227 aa14.94□□□□□ -0.02
RAB3GAP1-202ENST00000425393 BOLA1Q9Y3E2 137 aa14.94□□□□□ -0.02
RAB3GAP1-202ENST00000425393 RGL2O15211 777 aa14.93□□□□□ -0.02
RAB3GAP1-202ENST00000425393 BCL11BQ9C0K0 894 aaPredicted RBP14.93□□□□□ -0.02
RAB3GAP1-202ENST00000425393 G3V3G9 751 aa14.91□□□□□ -0.02
RAB3GAP1-202ENST00000425393 SOX12O15370 315 aa14.91□□□□□ -0.02
RAB3GAP1-202ENST00000425393 PHF8Q9UPP1 1060 aa14.88□□□□□ -0.03
RAB3GAP1-202ENST00000425393 MS4A4AQ96JQ5 239 aa14.87□□□□□ -0.03
RAB3GAP1-202ENST00000425393 STK24Q9Y6E0 443 aa14.87□□□□□ -0.03
RAB3GAP1-202ENST00000425393 STK25O00506 426 aa14.86□□□□□ -0.03
RAB3GAP1-202ENST00000425393 MICALL2Q8IY33 904 aa14.79□□□□□ -0.04
RAB3GAP1-202ENST00000425393 FBXO22Q8NEZ5 403 aa14.78□□□□□ -0.04
RAB3GAP1-202ENST00000425393 NLRP6P59044 892 aa14.77□□□□□ -0.05
RAB3GAP1-202ENST00000425393 MFRPQ9BY79 579 aa14.76□□□□□ -0.05
RAB3GAP1-202ENST00000425393 MARVELD3Q96A59 401 aa14.74□□□□□ -0.05
RAB3GAP1-202ENST00000425393 EMP3P54852 163 aa14.71□□□□□ -0.05
RAB3GAP1-202ENST00000425393 TMEM92Q6UXU6 159 aa14.69□□□□□ -0.06
RAB3GAP1-202ENST00000425393 HOXB3P14651 431 aaPredicted RBP14.65□□□□□ -0.06
RAB3GAP1-202ENST00000425393 HS6ST3Q8IZP7 471 aa14.62□□□□□ -0.07
RAB3GAP1-202ENST00000425393 ZNF710Q8N1W2 664 aa14.6□□□□□ -0.07
RAB3GAP1-202ENST00000425393 DOK7Q18PE1 504 aa14.59□□□□□ -0.07
RAB3GAP1-202ENST00000425393 FAM205CA6NFA0 338 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms