RNA–Protein interactions for RNA: ENST00000424643.3

SDCBPP2-201, Transcript of syndecan binding protein pseudogene 2, humanhuman

BASIC

Gene SDCBPP2, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP2-201ENST00000424643 RASEFQ8IZ41 740 aa10.6□□□□□ -0.71
SDCBPP2-201ENST00000424643 PHF12Q96QT6 1004 aa10.59□□□□□ -0.71
SDCBPP2-201ENST00000424643 KLHL34Q8N239 644 aa10.58□□□□□ -0.72
SDCBPP2-201ENST00000424643 NUBP1P53384 320 aa10.56□□□□□ -0.72
SDCBPP2-201ENST00000424643 OTUD5Q96G74 571 aa10.55□□□□□ -0.72
SDCBPP2-201ENST00000424643 PLSCR2Q9NRY7 297 aa10.55□□□□□ -0.72
SDCBPP2-201ENST00000424643 POTEB2H3BUK9 544 aa10.54□□□□□ -0.72
SDCBPP2-201ENST00000424643 IFNLR1Q8IU57 520 aaPredicted RBP10.52□□□□□ -0.73
SDCBPP2-201ENST00000424643 CCDC61Q9Y6R9 512 aa10.52□□□□□ -0.73
SDCBPP2-201ENST00000424643 PELP1Q8IZL8 1130 aaKnown RBP10.49□□□□□ -0.73
SDCBPP2-201ENST00000424643 DCAF8Q5TAQ9 597 aa10.46□□□□□ -0.73
SDCBPP2-201ENST00000424643 FAM212AQ96EL1 285 aa10.46□□□□□ -0.73
SDCBPP2-201ENST00000424643 KIF12Q96FN5 646 aa10.44□□□□□ -0.74
SDCBPP2-201ENST00000424643 MS4A3Q96HJ5 214 aa10.44□□□□□ -0.74
SDCBPP2-201ENST00000424643 MAP3K13O43283 966 aa10.41□□□□□ -0.74
SDCBPP2-201ENST00000424643 SPOCK2Q92563 424 aa10.41□□□□□ -0.74
SDCBPP2-201ENST00000424643 ASTLQ6HA08 431 aaPredicted RBP10.4□□□□□ -0.74
SDCBPP2-201ENST00000424643 RTN4Q9NQC3 1192 aaKnown RBP10.4□□□□□ -0.74
SDCBPP2-201ENST00000424643 POTEMA6NI47 508 aa10.39□□□□□ -0.75
SDCBPP2-201ENST00000424643 ATMINO43313 823 aaPredicted RBP10.39□□□□□ -0.75
SDCBPP2-201ENST00000424643 AMER1Q5JTC6 1135 aaPredicted RBP10.39□□□□□ -0.75
SDCBPP2-201ENST00000424643 METRNQ9UJH8 293 aa10.39□□□□□ -0.75
SDCBPP2-201ENST00000424643 C7P10643 843 aa10.37□□□□□ -0.75
SDCBPP2-201ENST00000424643 PYGBP11216 843 aa10.37□□□□□ -0.75
SDCBPP2-201ENST00000424643 SLC39A7Q92504 469 aa10.37□□□□□ -0.75
SDCBPP2-201ENST00000424643 POTEGQ6S5H5 508 aa10.35□□□□□ -0.75
SDCBPP2-201ENST00000424643 POTEJP0CG39 1038 aa10.34□□□□□ -0.75
SDCBPP2-201ENST00000424643 GSE1Q14687 1217 aa10.34□□□□□ -0.75
SDCBPP2-201ENST00000424643 CIZ1Q9ULV3 898 aaPredicted RBP10.34□□□□□ -0.75
SDCBPP2-201ENST00000424643 TRPC6Q9Y210 931 aa10.34□□□□□ -0.75
SDCBPP2-201ENST00000424643 PCDHB13Q9Y5F0 798 aa10.34□□□□□ -0.75
SDCBPP2-201ENST00000424643 MAMSTRQ6ZN01 415 aa10.3□□□□□ -0.76
SDCBPP2-201ENST00000424643 IFNL1Q8IU54 200 aa10.3□□□□□ -0.76
SDCBPP2-201ENST00000424643 ATN1P54259 1190 aaPredicted RBP10.28□□□□□ -0.76
SDCBPP2-201ENST00000424643 SGIP1Q9BQI5 828 aa10.28□□□□□ -0.76
SDCBPP2-201ENST00000424643 BMP2KQ9NSY1 1161 aaPredicted RBP10.26□□□□□ -0.77
SDCBPP2-201ENST00000424643 PCDHB8Q9UN66 801 aa10.26□□□□□ -0.77
SDCBPP2-201ENST00000424643 PCDH10Q9P2E7 1040 aa10.23□□□□□ -0.77
SDCBPP2-201ENST00000424643 CHRM1P11229 460 aaPredicted RBP10.22□□□□□ -0.77
SDCBPP2-201ENST00000424643 TIE1P35590 1138 aa10.22□□□□□ -0.77
SDCBPP2-201ENST00000424643 TTLL13PA6NNM8 815 aa10.21□□□□□ -0.77
SDCBPP2-201ENST00000424643 SCUBE2Q9NQ36 999 aa10.21□□□□□ -0.77
SDCBPP2-201ENST00000424643 POTEFA5A3E0 1075 aa10.2□□□□□ -0.78
SDCBPP2-201ENST00000424643 LCE2DQ5TA82 110 aaPredicted RBP10.2□□□□□ -0.78
SDCBPP2-201ENST00000424643 FAM163AQ96GL9 167 aaPredicted RBP10.19□□□□□ -0.78
SDCBPP2-201ENST00000424643 TMEM106CQ9BVX2 250 aa10.18□□□□□ -0.78
SDCBPP2-201ENST00000424643 SLC24A1O60721 1099 aa10.16□□□□□ -0.78
SDCBPP2-201ENST00000424643 ZNF467Q7Z7K2 595 aaPredicted RBP10.16□□□□□ -0.78
SDCBPP2-201ENST00000424643 TRIM35Q9UPQ4 493 aa10.15□□□□□ -0.78
SDCBPP2-201ENST00000424643 TRIM41Q8WV44 630 aa10.12□□□□□ -0.79
SDCBPP2-201ENST00000424643 COLQQ9Y215 455 aaPredicted RBP10.11□□□□□ -0.79
SDCBPP2-201ENST00000424643 PSEN1P49768 467 aa10.1□□□□□ -0.79
SDCBPP2-201ENST00000424643 SEC24BO95487 1268 aa10.09□□□□□ -0.79
SDCBPP2-201ENST00000424643 PDAP1Q13442 181 aaKnown RBP10.07□□□□□ -0.8
SDCBPP2-201ENST00000424643 PKD2Q13563 968 aa10.06□□□□□ -0.8
SDCBPP2-201ENST00000424643 RNF25Q96BH1 459 aaPredicted RBP10.06□□□□□ -0.8
SDCBPP2-201ENST00000424643 ECM2O94769 699 aaPredicted RBP10.04□□□□□ -0.8
SDCBPP2-201ENST00000424643 IER5LQ5T953 404 aa10.04□□□□□ -0.8
SDCBPP2-201ENST00000424643 RIOK3O14730 519 aaKnown RBP10.03□□□□□ -0.8
SDCBPP2-201ENST00000424643 GOLGA2Q08379 1002 aa10□□□□□ -0.81
SDCBPP2-201ENST00000424643 CABP2Q9NPB3 220 aa9.99□□□□□ -0.81
SDCBPP2-201ENST00000424643 PLCG2P16885 1265 aa9.98□□□□□ -0.81
SDCBPP2-201ENST00000424643 IRX5P78411 483 aaPredicted RBP9.98□□□□□ -0.81
SDCBPP2-201ENST00000424643 MKRN3Q13064 507 aaKnown RBP9.98□□□□□ -0.81
SDCBPP2-201ENST00000424643 RGL2O15211 777 aa9.97□□□□□ -0.81
SDCBPP2-201ENST00000424643 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.96□□□□□ -0.82
SDCBPP2-201ENST00000424643 CDAN1Q8IWY9 1227 aa9.96□□□□□ -0.82
SDCBPP2-201ENST00000424643 ZFP91Q96JP5 570 aaPredicted RBP9.96□□□□□ -0.82
SDCBPP2-201ENST00000424643 VGFO15240 615 aaPredicted RBP9.95□□□□□ -0.82
SDCBPP2-201ENST00000424643 SLAIN1Q8ND83 568 aa9.95□□□□□ -0.82
SDCBPP2-201ENST00000424643 OCEL1Q9H607 264 aa9.95□□□□□ -0.82
SDCBPP2-201ENST00000424643 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.92□□□□□ -0.82
SDCBPP2-201ENST00000424643 ST18O60284 1047 aa9.91□□□□□ -0.82
SDCBPP2-201ENST00000424643 EFCAB3Q8N7B9 438 aa9.91□□□□□ -0.82
SDCBPP2-201ENST00000424643 PDCD7Q8N8D1 485 aaKnown RBP9.9□□□□□ -0.82
SDCBPP2-201ENST00000424643 BCL11BQ9C0K0 894 aaPredicted RBP9.88□□□□□ -0.83
SDCBPP2-201ENST00000424643 TAOK2Q9UL54 1235 aa9.87□□□□□ -0.83
SDCBPP2-201ENST00000424643 STK25O00506 426 aa9.86□□□□□ -0.83
SDCBPP2-201ENST00000424643 DPY19L2Q6NUT2 758 aa9.86□□□□□ -0.83
SDCBPP2-201ENST00000424643 STK24Q9Y6E0 443 aa9.86□□□□□ -0.83
SDCBPP2-201ENST00000424643 ILDR1Q86SU0 546 aaPredicted RBP9.83□□□□□ -0.84
SDCBPP2-201ENST00000424643 PHF8Q9UPP1 1060 aa9.81□□□□□ -0.84
SDCBPP2-201ENST00000424643 SOX12O15370 315 aa9.8□□□□□ -0.84
SDCBPP2-201ENST00000424643 L3MBTL3Q96JM7 780 aaPredicted RBP9.8□□□□□ -0.84
SDCBPP2-201ENST00000424643 TMEM121BQ9BXQ6 578 aaPredicted RBP9.78□□□□□ -0.84
SDCBPP2-201ENST00000424643 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.77□□□□□ -0.85
SDCBPP2-201ENST00000424643 SNPHO15079 494 aa9.76□□□□□ -0.85
SDCBPP2-201ENST00000424643 MS4A4AQ96JQ5 239 aa9.76□□□□□ -0.85
SDCBPP2-201ENST00000424643 CHGAP10645 457 aaKnown RBP9.75□□□□□ -0.85
SDCBPP2-201ENST00000424643 BOLA1Q9Y3E2 137 aa9.75□□□□□ -0.85
SDCBPP2-201ENST00000424643 G3V3G9 751 aa9.73□□□□□ -0.85
SDCBPP2-201ENST00000424643 NLRP6P59044 892 aa9.73□□□□□ -0.85
SDCBPP2-201ENST00000424643 C3orf67Q6ZVT6 689 aa9.73□□□□□ -0.85
SDCBPP2-201ENST00000424643 SPNS2Q8IVW8 549 aa9.73□□□□□ -0.85
SDCBPP2-201ENST00000424643 MFRPQ9BY79 579 aa9.73□□□□□ -0.85
SDCBPP2-201ENST00000424643 MMRN1Q13201 1228 aa9.72□□□□□ -0.85
SDCBPP2-201ENST00000424643 FBXO22Q8NEZ5 403 aa9.72□□□□□ -0.85
SDCBPP2-201ENST00000424643 MARVELD3Q96A59 401 aa9.72□□□□□ -0.85
SDCBPP2-201ENST00000424643 DCAF8L2P0C7V8 631 aa9.71□□□□□ -0.86
SDCBPP2-201ENST00000424643 HS6ST3Q8IZP7 471 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms