RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 PPP1R1BQ9UD71 204 aaPredicted RBP5.3□□□□□ -1.56
TOP2A-201ENST00000423485 DMRT2Q9Y5R5 561 aa5.3□□□□□ -1.56
TOP2A-201ENST00000423485 DENND4BO75064 1496 aaPredicted RBP5.29□□□□□ -1.56
TOP2A-201ENST00000423485 PPP1R15AO75807 674 aaPredicted RBP5.29□□□□□ -1.56
TOP2A-201ENST00000423485 CCDC9Q9Y3X0 531 aaKnown RBP5.29□□□□□ -1.56
TOP2A-201ENST00000423485 ABCC8Q09428 1581 aa5.29□□□□□ -1.56
TOP2A-201ENST00000423485 KDM5BQ9UGL1 1544 aa5.28□□□□□ -1.56
TOP2A-201ENST00000423485 PRUNE2Q8WUY3 3088 aa5.28□□□□□ -1.56
TOP2A-201ENST00000423485 PEG3Q9GZU2 1588 aa5.28□□□□□ -1.56
TOP2A-201ENST00000423485 SMARCA2P51531 1590 aa5.28□□□□□ -1.56
TOP2A-201ENST00000423485 PPP6R1Q9UPN7 881 aa5.27□□□□□ -1.57
TOP2A-201ENST00000423485 DNAJC5Q9H3Z4 198 aa5.27□□□□□ -1.57
TOP2A-201ENST00000423485 FRYLO94915 3013 aa5.26□□□□□ -1.57
TOP2A-201ENST00000423485 HDGFP51858 240 aaKnown RBP5.26□□□□□ -1.57
TOP2A-201ENST00000423485 NPHP1O15259 732 aa5.25□□□□□ -1.57
TOP2A-201ENST00000423485 SYNJ1O43426 1573 aa5.25□□□□□ -1.57
TOP2A-201ENST00000423485 SLC24A1O60721 1099 aa5.24□□□□□ -1.57
TOP2A-201ENST00000423485 SPTBN5Q9NRC6 3674 aaKnown RBP5.23□□□□□ -1.57
TOP2A-201ENST00000423485 DISP3Q9P2K9 1392 aa5.23□□□□□ -1.57
TOP2A-201ENST00000423485 UBTFP17480 764 aaKnown RBP5.23□□□□□ -1.57
TOP2A-201ENST00000423485 CFAP44Q96MT7 982 aa5.23□□□□□ -1.57
TOP2A-201ENST00000423485 KLHL34Q8N239 644 aa5.22□□□□□ -1.57
TOP2A-201ENST00000423485 TMX4Q9H1E5 349 aaPredicted RBP5.22□□□□□ -1.57
TOP2A-201ENST00000423485 MLECQ14165 292 aa5.22□□□□□ -1.57
TOP2A-201ENST00000423485 LAMA1P25391 3075 aa5.21□□□□□ -1.58
TOP2A-201ENST00000423485 CHGAP10645 457 aaKnown RBP5.21□□□□□ -1.58
TOP2A-201ENST00000423485 SOGA1O94964 1423 aa5.21□□□□□ -1.58
TOP2A-201ENST00000423485 KCNH8Q96L42 1107 aa5.2□□□□□ -1.58
TOP2A-201ENST00000423485 DMDP11532 3685 aa5.2□□□□□ -1.58
TOP2A-201ENST00000423485 BAZ1AQ9NRL2 1556 aaPredicted RBP5.2□□□□□ -1.58
TOP2A-201ENST00000423485 BPTFQ12830 3046 aa5.19□□□□□ -1.58
TOP2A-201ENST00000423485 C16orf71Q8IYS4 520 aaPredicted RBP5.18□□□□□ -1.58
TOP2A-201ENST00000423485 PDS5BQ9NTI5 1447 aa5.18□□□□□ -1.58
TOP2A-201ENST00000423485 HMGB2P26583 209 aaKnown RBP5.18□□□□□ -1.58
TOP2A-201ENST00000423485 PIP4K2BP78356 416 aa5.17□□□□□ -1.58
TOP2A-201ENST00000423485 NUTM2BA6NNL0 878 aaPredicted RBP5.16□□□□□ -1.58
TOP2A-201ENST00000423485 NUTM2EB1AL46 878 aaPredicted RBP5.16□□□□□ -1.58
TOP2A-201ENST00000423485 NUTM2DQ5VT03 806 aaPredicted RBP5.16□□□□□ -1.58
TOP2A-201ENST00000423485 NUTM2AQ8IVF1 878 aaPredicted RBP5.16□□□□□ -1.58
TOP2A-201ENST00000423485 SMARCA4P51532 1647 aa5.16□□□□□ -1.58
TOP2A-201ENST00000423485 ZBTB7CA1YPR0 619 aa5.16□□□□□ -1.58
TOP2A-201ENST00000423485 HRCP23327 699 aa5.16□□□□□ -1.58
TOP2A-201ENST00000423485 LMOD2Q6P5Q4 547 aa5.16□□□□□ -1.58
TOP2A-201ENST00000423485 FAM69CQ0P6D2 419 aa5.16□□□□□ -1.58
TOP2A-201ENST00000423485 KRI1Q8N9T8 703 aaKnown RBP5.15□□□□□ -1.58
TOP2A-201ENST00000423485 C5orf42Q9H799 3197 aa5.15□□□□□ -1.59
TOP2A-201ENST00000423485 NEFMP07197 916 aa5.14□□□□□ -1.59
TOP2A-201ENST00000423485 PLEKHG5O94827 1062 aa5.14□□□□□ -1.59
TOP2A-201ENST00000423485 ZNF777Q9ULD5 760 aaPredicted RBP5.14□□□□□ -1.59
TOP2A-201ENST00000423485 EID1Q9Y6B2 187 aa5.14□□□□□ -1.59
TOP2A-201ENST00000423485 ASPMQ8IZT6 3477 aa5.13□□□□□ -1.59
TOP2A-201ENST00000423485 MSH5O43196 834 aa5.13□□□□□ -1.59
TOP2A-201ENST00000423485 MAP3K9P80192 1104 aa5.13□□□□□ -1.59
TOP2A-201ENST00000423485 TOM1O60784 492 aa5.12□□□□□ -1.59
TOP2A-201ENST00000423485 ARID3CA6NKF2 412 aa5.11□□□□□ -1.59
TOP2A-201ENST00000423485 ZFHX3Q15911 3703 aa5.11□□□□□ -1.59
TOP2A-201ENST00000423485 UBAP1LF5GYI3 381 aa5.11□□□□□ -1.59
TOP2A-201ENST00000423485 ZRANB1Q9UGI0 708 aa5.1□□□□□ -1.59
TOP2A-201ENST00000423485 ZFHX4Q86UP3 3567 aa5.1□□□□□ -1.59
TOP2A-201ENST00000423485 COL6A3P12111 3177 aa5.09□□□□□ -1.59
TOP2A-201ENST00000423485 BEGAINQ9BUH8 593 aa5.09□□□□□ -1.59
TOP2A-201ENST00000423485 PLEKHD1A6NEE1 506 aa5.08□□□□□ -1.6
TOP2A-201ENST00000423485 POGZQ7Z3K3 1410 aa5.07□□□□□ -1.6
TOP2A-201ENST00000423485 EIF4G2P78344 907 aaKnown RBP eCLIP5.07□□□□□ -1.6
TOP2A-201ENST00000423485 FREM2Q5SZK8 3169 aa5.06□□□□□ -1.6
TOP2A-201ENST00000423485 WASHC2AQ641Q2 1341 aa5.06□□□□□ -1.6
TOP2A-201ENST00000423485 ZNF326Q5BKZ1 582 aaKnown RBP5.06□□□□□ -1.6
TOP2A-201ENST00000423485 NBPF8Q3BBV2 869 aa5.06□□□□□ -1.6
TOP2A-201ENST00000423485 NBPF14Q5TI25 921 aa5.06□□□□□ -1.6
TOP2A-201ENST00000423485 IL27Q8NEV9 243 aa5.05□□□□□ -1.6
TOP2A-201ENST00000423485 PAXIP1Q6ZW49 1069 aaPredicted RBP5.05□□□□□ -1.6
TOP2A-201ENST00000423485 KDM6BO15054 1643 aa5.04□□□□□ -1.6
TOP2A-201ENST00000423485 ARXQ96QS3 562 aa5.04□□□□□ -1.6
TOP2A-201ENST00000423485 CELSR3Q9NYQ7 3312 aa5.04□□□□□ -1.6
TOP2A-201ENST00000423485 ARAP1Q96P48 1450 aa5.04□□□□□ -1.6
TOP2A-201ENST00000423485 FRYQ5TBA9 3013 aa5.04□□□□□ -1.6
TOP2A-201ENST00000423485 AIDAQ96BJ3 306 aa5.04□□□□□ -1.6
TOP2A-201ENST00000423485 NGLY1Q96IV0 654 aa5.04□□□□□ -1.6
TOP2A-201ENST00000423485 WDHD1O75717 1129 aaPredicted RBP5.04□□□□□ -1.6
TOP2A-201ENST00000423485 MAGI3Q5TCQ9 1506 aa5.04□□□□□ -1.6
TOP2A-201ENST00000423485 WRNQ14191 1432 aaPredicted RBP eCLIP5.04□□□□□ -1.6
TOP2A-201ENST00000423485 ATF3P18847 181 aa5.03□□□□□ -1.6
TOP2A-201ENST00000423485 MAPKBP1O60336 1514 aa5.03□□□□□ -1.6
TOP2A-201ENST00000423485 CUX1P39880 1505 aa5.03□□□□□ -1.6
TOP2A-201ENST00000423485 TOP2AP11388 1531 aaKnown RBP5.03□□□□□ -1.6
TOP2A-201ENST00000423485 TSPY4P0CV99 314 aa5.03□□□□□ -1.6
TOP2A-201ENST00000423485 TSPY10P0CW01 314 aa5.03□□□□□ -1.6
TOP2A-201ENST00000423485 G3V3G9 751 aa5.02□□□□□ -1.61
TOP2A-201ENST00000423485 GOLGA2Q08379 1002 aa5.02□□□□□ -1.61
TOP2A-201ENST00000423485 DCAF8Q5TAQ9 597 aa5.02□□□□□ -1.61
TOP2A-201ENST00000423485 BIVM-ERCC5R4GMW8 1640 aa5.02□□□□□ -1.61
TOP2A-201ENST00000423485 PRXQ9BXM0 1461 aa5.02□□□□□ -1.61
TOP2A-201ENST00000423485 EVA1CP58658 441 aa5.02□□□□□ -1.61
TOP2A-201ENST00000423485 CFAP47Q6ZTR5 3102 aa5.01□□□□□ -1.61
TOP2A-201ENST00000423485 CSRNP3Q8WYN3 585 aa5.01□□□□□ -1.61
TOP2A-201ENST00000423485 NEUROD2Q15784 382 aa5.01□□□□□ -1.61
TOP2A-201ENST00000423485 CARMIL2Q6F5E8 1435 aa5.01□□□□□ -1.61
TOP2A-201ENST00000423485 RAPGEF2Q9Y4G8 1499 aa5.01□□□□□ -1.61
TOP2A-201ENST00000423485 PTPRKQ15262 1439 aa5.01□□□□□ -1.61
TOP2A-201ENST00000423485 AQRO60306 1485 aaKnown RBP eCLIP5.01□□□□□ -1.619e-7■■■■■ 27.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms