RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 CEP164Q9UPV0 1460 aa18.58■□□□□ 0.56
CALD1-205ENST00000422748 PRDM2Q13029 1718 aa18.58■□□□□ 0.56
CALD1-205ENST00000422748 CADPSQ9ULU8 1353 aa18.58■□□□□ 0.56
CALD1-205ENST00000422748 BIVM-ERCC5R4GMW8 1640 aa18.56■□□□□ 0.56
CALD1-205ENST00000422748 KIF21BO75037 1637 aa18.54■□□□□ 0.56
CALD1-205ENST00000422748 CUX1P39880 1505 aa18.51■□□□□ 0.55
CALD1-205ENST00000422748 PLEKHG5O94827 1062 aa18.51■□□□□ 0.55
CALD1-205ENST00000422748 RANGAP1P46060 587 aaPredicted RBP18.48■□□□□ 0.55
CALD1-205ENST00000422748 CCER2I3L3R5 266 aa18.47■□□□□ 0.55
CALD1-205ENST00000422748 PPP1R15AO75807 674 aaPredicted RBP18.47■□□□□ 0.55
CALD1-205ENST00000422748 IRX6P78412 446 aaPredicted RBP18.47■□□□□ 0.55
CALD1-205ENST00000422748 SALL2Q9Y467 1007 aaPredicted RBP18.47■□□□□ 0.55
CALD1-205ENST00000422748 CUX2O14529 1486 aa18.43■□□□□ 0.54
CALD1-205ENST00000422748 DNAJC5BQ9UF47 199 aa18.43■□□□□ 0.54
CALD1-205ENST00000422748 NBR1Q14596 966 aa18.42■□□□□ 0.54
CALD1-205ENST00000422748 ARXQ96QS3 562 aa18.42■□□□□ 0.54
CALD1-205ENST00000422748 ANP32CO43423 234 aa18.41■□□□□ 0.54
CALD1-205ENST00000422748 ERICH6BQ5W0A0 696 aa18.41■□□□□ 0.54
CALD1-205ENST00000422748 WDR97A6NE52 1622 aa18.4■□□□□ 0.54
CALD1-205ENST00000422748 MAPKBP1O60336 1514 aa18.4■□□□□ 0.54
CALD1-205ENST00000422748 KANK4Q5T7N3 995 aaPredicted RBP18.4■□□□□ 0.54
CALD1-205ENST00000422748 RAPGEF2Q9Y4G8 1499 aa18.4■□□□□ 0.54
CALD1-205ENST00000422748 RRBP1Q9P2E9 1410 aaKnown RBP18.39■□□□□ 0.54
CALD1-205ENST00000422748 NESP48681 1621 aa18.38■□□□□ 0.53
CALD1-205ENST00000422748 FANCD2Q9BXW9 1451 aa18.37■□□□□ 0.53
CALD1-205ENST00000422748 NOP58Q9Y2X3 529 aaKnown RBP18.36■□□□□ 0.53
CALD1-205ENST00000422748 HIRIP3Q9BW71 556 aaPredicted RBP18.35■□□□□ 0.53
CALD1-205ENST00000422748 CCDC136Q96JN2 1154 aa18.35■□□□□ 0.53
CALD1-205ENST00000422748 LAMC3Q9Y6N6 1575 aa18.34■□□□□ 0.53
CALD1-205ENST00000422748 PAK3O75914 559 aaPredicted RBP18.33■□□□□ 0.53
CALD1-205ENST00000422748 TIMELESSQ9UNS1 1208 aa18.33■□□□□ 0.52
CALD1-205ENST00000422748 RAB3GAP2Q9H2M9 1393 aa18.31■□□□□ 0.52
CALD1-205ENST00000422748 PPP4R2Q9NY27 417 aa18.3■□□□□ 0.52
CALD1-205ENST00000422748 CCNB3Q8WWL7 1395 aa18.29■□□□□ 0.52
CALD1-205ENST00000422748 HNRNPUQ00839 825 aaKnown RBP eCLIP18.29■□□□□ 0.52
CALD1-205ENST00000422748 SIN3AQ96ST3 1273 aa18.28■□□□□ 0.52
CALD1-205ENST00000422748 IL27Q8NEV9 243 aa18.28■□□□□ 0.52
CALD1-205ENST00000422748 KLHL34Q8N239 644 aa18.27■□□□□ 0.52
CALD1-205ENST00000422748 ARAP1Q96P48 1450 aa18.27■□□□□ 0.52
CALD1-205ENST00000422748 FGD5Q6ZNL6 1462 aa18.25■□□□□ 0.51
CALD1-205ENST00000422748 KIF27Q86VH2 1401 aa18.24■□□□□ 0.51
CALD1-205ENST00000422748 DNMBPQ6XZF7 1577 aa18.24■□□□□ 0.51
CALD1-205ENST00000422748 PRXQ9BXM0 1461 aa18.23■□□□□ 0.51
CALD1-205ENST00000422748 B4GALNT3Q6L9W6 998 aa18.22■□□□□ 0.51
CALD1-205ENST00000422748 TOPBP1Q92547 1522 aa18.21■□□□□ 0.51
CALD1-205ENST00000422748 RTL5Q5HYW3 569 aaPredicted RBP18.2■□□□□ 0.5
CALD1-205ENST00000422748 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.2■□□□□ 0.5
CALD1-205ENST00000422748 UBE2Q2Q8WVN8 375 aa18.19■□□□□ 0.5
CALD1-205ENST00000422748 ERICH3Q5RHP9 1530 aa18.18■□□□□ 0.5
CALD1-205ENST00000422748 PDS5BQ9NTI5 1447 aa18.17■□□□□ 0.5
CALD1-205ENST00000422748 URB2Q14146 1524 aaKnown RBP18.16■□□□□ 0.5
CALD1-205ENST00000422748 SETD5Q9C0A6 1442 aa18.15■□□□□ 0.5
CALD1-205ENST00000422748 POLA1P09884 1462 aaPredicted RBP18.14■□□□□ 0.5
CALD1-205ENST00000422748 KIF21AQ7Z4S6 1674 aa18.13■□□□□ 0.49
CALD1-205ENST00000422748 IGF1RP08069 1367 aa18.12■□□□□ 0.49
CALD1-205ENST00000422748 IPO9Q96P70 1041 aaKnown RBP18.11■□□□□ 0.49
CALD1-205ENST00000422748 RAD54L2Q9Y4B4 1467 aa18.1■□□□□ 0.49
CALD1-205ENST00000422748 ABCA10Q8WWZ4 1543 aa18.1■□□□□ 0.49
CALD1-205ENST00000422748 ANP32AP39687 249 aaKnown RBP18.08■□□□□ 0.49
CALD1-205ENST00000422748 ZBTB47Q9UFB7 747 aaPredicted RBP18.08■□□□□ 0.48
CALD1-205ENST00000422748 WASHC2AQ641Q2 1341 aa18.03■□□□□ 0.48
CALD1-205ENST00000422748 PODXL2Q9NZ53 605 aa18.02■□□□□ 0.48
CALD1-205ENST00000422748 CARMIL1Q5VZK9 1371 aa17.99■□□□□ 0.47
CALD1-205ENST00000422748 CCDC184Q52MB2 194 aa17.98■□□□□ 0.47
CALD1-205ENST00000422748 TULP1O00294 542 aaPredicted RBP17.95■□□□□ 0.46
CALD1-205ENST00000422748 TONSLQ96HA7 1378 aa17.95■□□□□ 0.46
CALD1-205ENST00000422748 MRC2Q9UBG0 1479 aa17.95■□□□□ 0.46
CALD1-205ENST00000422748 TARBP1Q13395 1621 aaKnown RBP17.94■□□□□ 0.46
CALD1-205ENST00000422748 ABCA5Q8WWZ7 1642 aa17.94■□□□□ 0.46
CALD1-205ENST00000422748 ARHGAP35Q9NRY4 1499 aa17.94■□□□□ 0.46
CALD1-205ENST00000422748 C11orf95C9JLR9 678 aaPredicted RBP17.94■□□□□ 0.46
CALD1-205ENST00000422748 FAM50AQ14320 339 aaKnown RBP17.94■□□□□ 0.46
CALD1-205ENST00000422748 FAM9BQ8IZU0 186 aa17.92■□□□□ 0.46
CALD1-205ENST00000422748 ZBED9Q6R2W3 1325 aa17.92■□□□□ 0.46
CALD1-205ENST00000422748 NEFMP07197 916 aa17.92■□□□□ 0.46
CALD1-205ENST00000422748 WASHC2CQ9Y4E1 1318 aa17.91■□□□□ 0.46
CALD1-205ENST00000422748 PHLDB1Q86UU1 1377 aa17.9■□□□□ 0.46
CALD1-205ENST00000422748 LAS1LQ9Y4W2 734 aaKnown RBP17.9■□□□□ 0.46
CALD1-205ENST00000422748 AMER1Q5JTC6 1135 aaPredicted RBP17.9■□□□□ 0.46
CALD1-205ENST00000422748 TIAM1Q13009 1591 aa17.9■□□□□ 0.46
CALD1-205ENST00000422748 CUL7Q14999 1698 aa17.89■□□□□ 0.45
CALD1-205ENST00000422748 TDRD9Q8NDG6 1382 aaKnown RBP17.89■□□□□ 0.45
CALD1-205ENST00000422748 USP35Q9P2H5 1018 aa17.88■□□□□ 0.45
CALD1-205ENST00000422748 WDR62O43379 1518 aa17.87■□□□□ 0.45
CALD1-205ENST00000422748 BRPF3Q9ULD4 1205 aa17.87■□□□□ 0.45
CALD1-205ENST00000422748 FHAD1B1AJZ9 1412 aa17.87■□□□□ 0.45
CALD1-205ENST00000422748 GAPVD1Q14C86 1478 aa17.86■□□□□ 0.45
CALD1-205ENST00000422748 AKNAQ7Z591 1439 aa17.85■□□□□ 0.45
CALD1-205ENST00000422748 NPM2Q86SE8 214 aaKnown RBP17.85■□□□□ 0.45
CALD1-205ENST00000422748 MRS2Q9HD23 443 aa17.84■□□□□ 0.45
CALD1-205ENST00000422748 LRRC9Q6ZRR7 1453 aa17.83■□□□□ 0.45
CALD1-205ENST00000422748 HOMEZQ8IX15 550 aa17.83■□□□□ 0.44
CALD1-205ENST00000422748 MAP3K1Q13233 1512 aa17.82■□□□□ 0.44
CALD1-205ENST00000422748 CNTLNQ9NXG0 1405 aa17.81■□□□□ 0.44
CALD1-205ENST00000422748 HSPA5P11021 654 aaKnown RBP17.8■□□□□ 0.44
CALD1-205ENST00000422748 PRKRIP1Q9H875 184 aaPredicted RBP17.8■□□□□ 0.44
CALD1-205ENST00000422748 NCOA2Q15596 1464 aa17.79■□□□□ 0.44
CALD1-205ENST00000422748 THOC2Q8NI27 1593 aaKnown RBP17.78■□□□□ 0.44
CALD1-205ENST00000422748 SMG6Q86US8 1419 aaKnown RBP17.78■□□□□ 0.44
CALD1-205ENST00000422748 KDM5BQ9UGL1 1544 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms